RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 CCDC155Q8N6L0 562 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 FAM200AQ8TCP9 573 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 BCL2L12Q9HB09 334 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 A6NNZ2 444 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 TUBB8Q3ZCM7 444 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 TET3O43151 1660 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 MXRA7P84157 204 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 CROCC2H7BZ55 1655 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 PIBF1Q8WXW3 757 aa8.97□□□□□ -0.97
CSRP1-218ENST00000533402 OAS2P29728 719 aaKnown RBP8.96□□□□□ -0.97
CSRP1-218ENST00000533402 CEP85LQ5SZL2 805 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 TPX2Q9ULW0 747 aaKnown RBP8.96□□□□□ -0.97
CSRP1-218ENST00000533402 PTGS1P23219 599 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 NOP2P46087 812 aaKnown RBP8.96□□□□□ -0.97
CSRP1-218ENST00000533402 BLOC1S2Q6QNY1 142 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 CCDC129Q6ZRS4 1044 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 CWC25Q9NXE8 425 aaPredicted RBP8.96□□□□□ -0.97
CSRP1-218ENST00000533402 CCDC196A0A1B0GTZ2 297 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 FSD2A1L4K1 749 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 TOM1O60784 492 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 RBM5P52756 815 aaKnown RBP eCLIP8.96□□□□□ -0.97
CSRP1-218ENST00000533402 ELF2Q15723 593 aa8.96□□□□□ -0.97
CSRP1-218ENST00000533402 MAP7Q14244 749 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 RIC3Q7Z5B4 369 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 STMN2Q93045 179 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 TTC14Q96N46 770 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 PPP1R12BO60237 982 aaPredicted RBP8.96□□□□□ -0.98
CSRP1-218ENST00000533402 NUTM1Q86Y26 1132 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 JAKMIP1Q96N16 626 aaKnown RBP8.96□□□□□ -0.98
CSRP1-218ENST00000533402 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.96□□□□□ -0.98
CSRP1-218ENST00000533402 PRDM11Q9NQV5 511 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 EVCP57679 992 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 BIRC2Q13490 618 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 LRRC23Q53EV4 343 aaPredicted RBP8.96□□□□□ -0.98
CSRP1-218ENST00000533402 RAB3IL1Q8TBN0 382 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 RABGAP1Q9Y3P9 1069 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 MRFAP1Q9Y605 127 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 FRMD3A2A2Y4 597 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 WASHC4Q2M389 1173 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 ESCO1Q5FWF5 840 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 KLHL10Q6JEL2 608 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 SYT10Q6XYQ8 523 aa8.96□□□□□ -0.98
CSRP1-218ENST00000533402 TOM1L2Q6ZVM7 507 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 GBP5Q96PP8 586 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 MX1P20591 662 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 POLD1P28340 1107 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 UBTFL1P0CB47 393 aaPredicted RBP8.95□□□□□ -0.98
CSRP1-218ENST00000533402 PPP2R3AQ06190 1150 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 SMC6Q96SB8 1091 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 CAPN7Q9Y6W3 813 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 ABCC1P33527 1531 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 NEK11Q8NG66 645 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 GOLGA5Q8TBA6 731 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 STRN4Q9NRL3 753 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 RHOXF2BP0C7M4 288 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 ANO6Q4KMQ2 910 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 RHOXF2Q9BQY4 288 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 NUCKS1Q9H1E3 243 aaKnown RBP8.95□□□□□ -0.98
CSRP1-218ENST00000533402 NOB1Q9ULX3 412 aaKnown RBP8.95□□□□□ -0.98
CSRP1-218ENST00000533402 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.95□□□□□ -0.98
CSRP1-218ENST00000533402 NKTRP30414 1462 aaKnown RBP8.95□□□□□ -0.98
CSRP1-218ENST00000533402 A0A1W2PRG0 241 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 RAPGEF3O95398 923 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC97Q96F63 343 aaPredicted RBP8.95□□□□□ -0.98
CSRP1-218ENST00000533402 NACAP1Q9BZK3 213 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 STMN4Q9H169 189 aaPredicted RBP8.95□□□□□ -0.98
CSRP1-218ENST00000533402 CCDC61Q9Y6R9 512 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 E2F4Q16254 413 aa8.95□□□□□ -0.98
CSRP1-218ENST00000533402 KIF1CO43896 1103 aaKnown RBP8.94□□□□□ -0.98
CSRP1-218ENST00000533402 ZPR1O75312 459 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 KRT18P05783 430 aaKnown RBP8.94□□□□□ -0.98
CSRP1-218ENST00000533402 PNMA8AQ86V59 439 aaPredicted RBP8.94□□□□□ -0.98
CSRP1-218ENST00000533402 DDX23Q9BUQ8 820 aaKnown RBP8.94□□□□□ -0.98
CSRP1-218ENST00000533402 SLC8A1P32418 973 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 FKBP15Q5T1M5 1219 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 ICE2Q659A1 982 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 WHAMMQ8TF30 809 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 MLH3Q9UHC1 1453 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 SMIM24O75264 130 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 SETDB1Q15047 1291 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 TRPM2O94759 1503 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 KDM5AP29375 1690 aaKnown RBP8.94□□□□□ -0.98
CSRP1-218ENST00000533402 SURF6O75683 361 aaKnown RBP8.94□□□□□ -0.98
CSRP1-218ENST00000533402 NECTIN2Q92692 538 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 TTC21BQ7Z4L5 1316 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 GOLGA6CA6NDK9 693 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 GOLGA6DP0CG33 693 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 TRIM7Q9C029 511 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 VCX3BQ9H321 246 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 GOLGA6AQ9NYA3 693 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 CETN3O15182 167 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 ZBTB16Q05516 673 aa8.94□□□□□ -0.98
CSRP1-218ENST00000533402 TSPYL2Q9H2G4 693 aaPredicted RBP8.94□□□□□ -0.98
CSRP1-218ENST00000533402 ZKSCAN8Q15776 578 aaPredicted RBP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 BAIAP2L1Q9UHR4 511 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 ZC3H13Q5T200 1668 aaKnown RBP8.93□□□□□ -0.98
CSRP1-218ENST00000533402 CACNA2D4Q7Z3S7 1137 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 TRIM22Q8IYM9 498 aa8.93□□□□□ -0.98
CSRP1-218ENST00000533402 PUF60Q9UHX1 559 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms