RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 UPF3BQ9BZI7 483 aaKnown RBP9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SMC3Q9UQE7 1217 aa9.39□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ADAMTS7Q9UKP4 1686 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SIPA1L3O60292 1781 aaPredicted RBP9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RGPD2P0DJD1 1756 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ABCC6O95255 1503 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PRIM1P49642 420 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ANKRD1Q15327 319 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 CWC27Q6UX04 472 aaKnown RBP9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RAPGEF4Q8WZA2 1011 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 KCNB2Q92953 911 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PDLIM2Q96JY6 352 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TTC14Q96N46 770 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 VPS9D1Q9Y2B5 631 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 CYP46A1Q9Y6A2 500 aa9.38□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ZSCAN22P10073 491 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 LAPTM4AQ15012 233 aa9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 UVSSAQ2YD98 709 aa9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 LRRC59Q96AG4 307 aaKnown RBP9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TSPY26PQ9H489 355 aa9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 CCDC39Q9UFE4 941 aa9.37□□□□□ -0.91
SOX9-AS1-212ENST00000533232 KCNQ3O43525 872 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 STX6O43752 255 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TPM2P07951 284 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TERF1P54274 439 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 KRT28Q7Z3Y7 464 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TICAM2Q86XR7 235 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TMEM63CQ9P1W3 806 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SYCE3A1L190 88 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 MAP4K4O95819 1239 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PDCP20941 246 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 KCNJ4P48050 445 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 AK2P54819 239 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 UBE2HP62256 183 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 LMOD2Q6P5Q4 547 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 NOL8Q76FK4 1167 aaKnown RBP9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 AACSQ86V21 672 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SNRKQ9NRH2 765 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PDRG1Q9NUG6 133 aa9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 NOL7Q9UMY1 257 aaKnown RBP9.36□□□□□ -0.91
SOX9-AS1-212ENST00000533232 CCDC183Q5T5S1 534 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ZNF790Q6PG37 636 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RUFY3Q7L099 469 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PTCD2Q8WV60 388 aaKnown RBP9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 KCNK17Q96T54 332 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ALDH8A1Q9H2A2 487 aaPredicted RBP9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 C19orf44Q9H6X5 657 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SLC52A2Q9HAB3 445 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 HMG20BQ9P0W2 317 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 CCDC171Q6TFL3 1326 aa9.35□□□□□ -0.91
SOX9-AS1-212ENST00000533232 GOLGA8CPA6NN73 597 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ZNF500O60304 480 aaPredicted RBP9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 KRT32Q14532 448 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 FOXD4L5Q5VV16 416 aaPredicted RBP9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 USP48Q86UV5 1035 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PROSER2Q86WR7 435 aaPredicted RBP9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 IFNL2Q8IZJ0 200 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 FOXD4L4Q8WXT5 416 aaPredicted RBP9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 JAKMIP1Q96N16 626 aaKnown RBP9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SLC4A5Q9BY07 1137 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RBM27Q9P2N5 1060 aaKnown RBP9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 COL15A1P39059 1388 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 RFX7Q2KHR2 1363 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 PXDNQ92626 1479 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 ADAMTSL3P82987 1691 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 SCN11AQ9UI33 1791 aa9.34□□□□□ -0.91
SOX9-AS1-212ENST00000533232 OFD1O75665 1012 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 F13A1P00488 732 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ANXA1P04083 346 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 SYT1P21579 422 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 NECTIN1Q15223 517 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CWF19L2Q2TBE0 894 aaKnown RBP9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 TTC5Q8N0Z6 440 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 MAP4K1Q92918 833 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 SUCLG2Q96I99 432 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ORAI2Q96SN7 254 aa9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 METTL22Q9BUU2 404 aaPredicted RBP9.34□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ERBB4Q15303 1308 aa9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 NPHP3Q7Z494 1330 aa9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 C1orf167Q5SNV9 1468 aa9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 RPAP1Q9BWH6 1393 aaPredicted RBP9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 SNRPA1P09661 255 aaKnown RBP9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 CHMP4CQ96CF2 233 aa9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 IL25Q9H293 177 aa9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 BICC1Q9H694 974 aaKnown RBP9.33□□□□□ -0.92
SOX9-AS1-212ENST00000533232 ALS2Q96Q42 1657 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 NEURL1BA8MQ27 555 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 AIMP1Q12904 312 aaKnown RBP9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 GCKRQ14397 625 aa9.32□□□□□ -0.92
SOX9-AS1-212ENST00000533232 PROSER3Q2NL68 480 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms