RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 DNAJC5GQ8N7S2 189 aa18.47■□□□□ 0.55
CSRP1-217ENST00000533188 LINS1Q8NG48 757 aa18.47■□□□□ 0.55
CSRP1-217ENST00000533188 LTBP3Q9NS15 1303 aa18.47■□□□□ 0.55
CSRP1-217ENST00000533188 POTECB2RU33 542 aa18.46■□□□□ 0.55
CSRP1-217ENST00000533188 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.55
CSRP1-217ENST00000533188 GCKRQ14397 625 aa18.46■□□□□ 0.55
CSRP1-217ENST00000533188 SLC51AQ86UW1 340 aa18.46■□□□□ 0.55
CSRP1-217ENST00000533188 RPGRQ92834 1020 aaKnown RBP18.46■□□□□ 0.55
CSRP1-217ENST00000533188 BCAR3O75815 825 aa18.45■□□□□ 0.54
CSRP1-217ENST00000533188 FSTL1Q12841 308 aa18.45■□□□□ 0.54
CSRP1-217ENST00000533188 UBE3BQ7Z3V4 1068 aa18.45■□□□□ 0.54
CSRP1-217ENST00000533188 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
CSRP1-217ENST00000533188 NOB1Q9ULX3 412 aaKnown RBP18.45■□□□□ 0.54
CSRP1-217ENST00000533188 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
CSRP1-217ENST00000533188 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
CSRP1-217ENST00000533188 C16orf71Q8IYS4 520 aaPredicted RBP18.44■□□□□ 0.54
CSRP1-217ENST00000533188 ABCC4O15439 1325 aa18.44■□□□□ 0.54
CSRP1-217ENST00000533188 CDHR2Q9BYE9 1310 aa18.44■□□□□ 0.54
CSRP1-217ENST00000533188 HOXA10P31260 410 aaPredicted RBP18.43■□□□□ 0.54
CSRP1-217ENST00000533188 TAOK3Q9H2K8 898 aa18.43■□□□□ 0.54
CSRP1-217ENST00000533188 SNED1Q8TER0 1413 aa18.42■□□□□ 0.54
CSRP1-217ENST00000533188 VEGFAP15692 232 aaPredicted RBP18.42■□□□□ 0.54
CSRP1-217ENST00000533188 CASP7P55210 303 aa18.42■□□□□ 0.54
CSRP1-217ENST00000533188 HTRA3P83110 453 aa18.42■□□□□ 0.54
CSRP1-217ENST00000533188 OLFM4Q6UX06 510 aa18.42■□□□□ 0.54
CSRP1-217ENST00000533188 SRCIN1Q9C0H9 1055 aa18.42■□□□□ 0.54
CSRP1-217ENST00000533188 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
CSRP1-217ENST00000533188 H7C1W4 665 aa18.41■□□□□ 0.54
CSRP1-217ENST00000533188 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
CSRP1-217ENST00000533188 LTBP1Q14766 1721 aa18.4■□□□□ 0.54
CSRP1-217ENST00000533188 A0A1B0GUL6 1792 aa18.4■□□□□ 0.54
CSRP1-217ENST00000533188 PDE8AO60658 829 aa18.4■□□□□ 0.54
CSRP1-217ENST00000533188 ALDH1L1O75891 902 aa18.4■□□□□ 0.54
CSRP1-217ENST00000533188 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
CSRP1-217ENST00000533188 FRAT1Q92837 279 aaPredicted RBP18.4■□□□□ 0.54
CSRP1-217ENST00000533188 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
CSRP1-217ENST00000533188 CRAMP1Q96RY5 1269 aa18.4■□□□□ 0.54
CSRP1-217ENST00000533188 GRM8O00222 908 aa18.39■□□□□ 0.53
CSRP1-217ENST00000533188 PPEF1O14829 653 aaPredicted RBP18.39■□□□□ 0.53
CSRP1-217ENST00000533188 ALDH1B1P30837 517 aa18.39■□□□□ 0.53
CSRP1-217ENST00000533188 CTSWP56202 376 aa18.39■□□□□ 0.53
CSRP1-217ENST00000533188 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
CSRP1-217ENST00000533188 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
CSRP1-217ENST00000533188 SMC1BQ8NDV3 1235 aa18.39■□□□□ 0.53
CSRP1-217ENST00000533188 API5Q9BZZ5 524 aaKnown RBP18.39■□□□□ 0.53
CSRP1-217ENST00000533188 DUOX1Q9NRD9 1551 aa18.38■□□□□ 0.53
CSRP1-217ENST00000533188 TRIM27P14373 513 aa18.38■□□□□ 0.53
CSRP1-217ENST00000533188 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
CSRP1-217ENST00000533188 DDNO94850 711 aaPredicted RBP18.37■□□□□ 0.53
CSRP1-217ENST00000533188 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
CSRP1-217ENST00000533188 GRAPQ13588 217 aa18.37■□□□□ 0.53
CSRP1-217ENST00000533188 DPY19L2Q6NUT2 758 aa18.37■□□□□ 0.53
CSRP1-217ENST00000533188 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
CSRP1-217ENST00000533188 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
CSRP1-217ENST00000533188 HSP90B1P14625 803 aaKnown RBP18.36■□□□□ 0.53
CSRP1-217ENST00000533188 CCDC152Q4G0S7 254 aa18.36■□□□□ 0.53
CSRP1-217ENST00000533188 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
CSRP1-217ENST00000533188 CELF1Q92879 486 aaKnown RBP18.36■□□□□ 0.53
CSRP1-217ENST00000533188 C9orf78Q9NZ63 289 aaPredicted RBP18.36■□□□□ 0.53
CSRP1-217ENST00000533188 UTYO14607 1347 aa18.35■□□□□ 0.53
CSRP1-217ENST00000533188 NBPF7P0C2Y1 421 aaPredicted RBP18.35■□□□□ 0.53
CSRP1-217ENST00000533188 ATF7IPQ6VMQ6 1270 aa18.35■□□□□ 0.53
CSRP1-217ENST00000533188 TTLL11Q8NHH1 800 aa18.35■□□□□ 0.53
CSRP1-217ENST00000533188 PLA2G12BQ9BX93 195 aa18.35■□□□□ 0.53
CSRP1-217ENST00000533188 GREM2Q9H772 168 aa18.35■□□□□ 0.53
CSRP1-217ENST00000533188 ZNF277Q9NRM2 450 aaPredicted RBP18.35■□□□□ 0.53
CSRP1-217ENST00000533188 SCN4AP35499 1836 aa18.35■□□□□ 0.53
CSRP1-217ENST00000533188 RTL9Q8NET4 1388 aa18.34■□□□□ 0.53
CSRP1-217ENST00000533188 CCT4P50991 539 aaKnown RBP18.34■□□□□ 0.53
CSRP1-217ENST00000533188 FOXO4P98177 505 aa18.34■□□□□ 0.53
CSRP1-217ENST00000533188 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
CSRP1-217ENST00000533188 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
CSRP1-217ENST00000533188 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
CSRP1-217ENST00000533188 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
CSRP1-217ENST00000533188 SUCLG2Q96I99 432 aa18.34■□□□□ 0.53
CSRP1-217ENST00000533188 IPO8O15397 1037 aaKnown RBP18.33■□□□□ 0.52
CSRP1-217ENST00000533188 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
CSRP1-217ENST00000533188 KLRG1Q96E93 195 aa18.33■□□□□ 0.52
CSRP1-217ENST00000533188 KAZALD1Q96I82 304 aa18.33■□□□□ 0.52
CSRP1-217ENST00000533188 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.52
CSRP1-217ENST00000533188 COL4A5P29400 1685 aa18.33■□□□□ 0.52
CSRP1-217ENST00000533188 ZNF541Q9H0D2 1346 aa18.32■□□□□ 0.52
CSRP1-217ENST00000533188 POTEIP0CG38 1075 aa18.32■□□□□ 0.52
CSRP1-217ENST00000533188 POTEJP0CG39 1038 aa18.32■□□□□ 0.52
CSRP1-217ENST00000533188 L3MBTL3Q96JM7 780 aaPredicted RBP18.32■□□□□ 0.52
CSRP1-217ENST00000533188 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
CSRP1-217ENST00000533188 ATP6V0A2Q9Y487 856 aa18.32■□□□□ 0.52
CSRP1-217ENST00000533188 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
CSRP1-217ENST00000533188 FZD9O00144 591 aa18.3■□□□□ 0.52
CSRP1-217ENST00000533188 BBOX1O75936 387 aa18.3■□□□□ 0.52
CSRP1-217ENST00000533188 CSF1RP07333 972 aa18.3■□□□□ 0.52
CSRP1-217ENST00000533188 RLBP1P12271 317 aa18.3■□□□□ 0.52
CSRP1-217ENST00000533188 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
CSRP1-217ENST00000533188 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
CSRP1-217ENST00000533188 PSMD1Q99460 953 aa18.3■□□□□ 0.52
CSRP1-217ENST00000533188 BICC1Q9H694 974 aaKnown RBP18.3■□□□□ 0.52
CSRP1-217ENST00000533188 CHMP3Q9Y3E7 222 aa18.3■□□□□ 0.52
CSRP1-217ENST00000533188 ITGA6P23229 1130 aa18.29■□□□□ 0.52
CSRP1-217ENST00000533188 RPS8P62241 208 aaKnown RBP18.29■□□□□ 0.52
CSRP1-217ENST00000533188 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms