RNA–Protein interactions for RNA: ENST00000533073.5

NCAM1-215, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene NCAM1, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-215ENST00000533073 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
NCAM1-215ENST00000533073 AOC3Q16853 763 aa16.09■□□□□ 0.17
NCAM1-215ENST00000533073 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
NCAM1-215ENST00000533073 SH3TC1Q8TE82 1336 aa16.09■□□□□ 0.17
NCAM1-215ENST00000533073 DDX60Q8IY21 1712 aaKnown RBP16.09■□□□□ 0.17
NCAM1-215ENST00000533073 HOXB7P09629 217 aa16.08■□□□□ 0.17
NCAM1-215ENST00000533073 EPS15P42566 896 aa16.08■□□□□ 0.17
NCAM1-215ENST00000533073 VEGFBP49765 207 aa16.08■□□□□ 0.17
NCAM1-215ENST00000533073 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.17
NCAM1-215ENST00000533073 SUPT20HQ8NEM7 779 aa16.08■□□□□ 0.17
NCAM1-215ENST00000533073 RTFDC1Q9BY42 306 aaPredicted RBP16.08■□□□□ 0.17
NCAM1-215ENST00000533073 VPS33BQ9H267 617 aa16.08■□□□□ 0.17
NCAM1-215ENST00000533073 LRRC37AA6NMS7 1700 aa16.08■□□□□ 0.16
NCAM1-215ENST00000533073 CAPN15O75808 1086 aa16.08■□□□□ 0.16
NCAM1-215ENST00000533073 BBOX1O75936 387 aa16.08■□□□□ 0.16
NCAM1-215ENST00000533073 TAF1P21675 1872 aa16.07■□□□□ 0.16
NCAM1-215ENST00000533073 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
NCAM1-215ENST00000533073 DDX46Q7L014 1031 aaKnown RBP16.07■□□□□ 0.16
NCAM1-215ENST00000533073 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
NCAM1-215ENST00000533073 DUOX1Q9NRD9 1551 aa16.06■□□□□ 0.16
NCAM1-215ENST00000533073 RASSF10A6NK89 507 aa16.06■□□□□ 0.16
NCAM1-215ENST00000533073 GRAPQ13588 217 aa16.06■□□□□ 0.16
NCAM1-215ENST00000533073 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
NCAM1-215ENST00000533073 GRAPLQ8TC17 118 aaPredicted RBP16.06■□□□□ 0.16
NCAM1-215ENST00000533073 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
NCAM1-215ENST00000533073 FOXN1O15353 648 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 USP50Q70EL3 339 aaPredicted RBP16.05■□□□□ 0.16
NCAM1-215ENST00000533073 MPNDQ8N594 471 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 ZNF428Q96B54 188 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
NCAM1-215ENST00000533073 NOP58Q9Y2X3 529 aaKnown RBP16.05■□□□□ 0.16
NCAM1-215ENST00000533073 ANP32AP39687 249 aaKnown RBP16.05■□□□□ 0.16
NCAM1-215ENST00000533073 CXCL9Q07325 125 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 KIAA2012Q0VF49 1180 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 ANKRD13DQ6ZTN6 518 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 GPRC5DQ9NZD1 345 aa16.05■□□□□ 0.16
NCAM1-215ENST00000533073 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
NCAM1-215ENST00000533073 RRP1P56182 461 aaKnown RBP16.04■□□□□ 0.16
NCAM1-215ENST00000533073 DEFB115Q30KQ5 88 aa16.04■□□□□ 0.16
NCAM1-215ENST00000533073 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
NCAM1-215ENST00000533073 AIDAQ96BJ3 306 aa16.04■□□□□ 0.16
NCAM1-215ENST00000533073 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
NCAM1-215ENST00000533073 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
NCAM1-215ENST00000533073 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
NCAM1-215ENST00000533073 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
NCAM1-215ENST00000533073 ADARB2Q9NS39 739 aaKnown RBP16.03■□□□□ 0.16
NCAM1-215ENST00000533073 MBIPQ9NS73 344 aa16.03■□□□□ 0.16
NCAM1-215ENST00000533073 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
NCAM1-215ENST00000533073 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
NCAM1-215ENST00000533073 GMPSP49915 693 aaPredicted RBP16.02■□□□□ 0.16
NCAM1-215ENST00000533073 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.16
NCAM1-215ENST00000533073 FAM89AQ96GI7 184 aa16.02■□□□□ 0.16
NCAM1-215ENST00000533073 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.16
NCAM1-215ENST00000533073 COL4A1P02462 1669 aa16.02■□□□□ 0.15
NCAM1-215ENST00000533073 TRAF5O00463 557 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 CTCFP49711 727 aaPredicted RBP16.01■□□□□ 0.15
NCAM1-215ENST00000533073 CIAPIN1Q6FI81 312 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 BCL11AQ9H165 835 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 WBP1LQ9NX94 342 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 RCAN3Q9UKA8 241 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 RAD17O75943 681 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 ZNF853P0CG23 659 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 MS4A1P11836 297 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 IPO9Q96P70 1041 aaKnown RBP16.01■□□□□ 0.15
NCAM1-215ENST00000533073 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
NCAM1-215ENST00000533073 PRDM10Q9NQV6 1147 aa16.01■□□□□ 0.15
NCAM1-215ENST00000533073 TNIP1Q15025 636 aa16■□□□□ 0.15
NCAM1-215ENST00000533073 SF3B3Q15393 1217 aaKnown RBP16■□□□□ 0.15
NCAM1-215ENST00000533073 IFT57Q9NWB7 429 aa16■□□□□ 0.15
NCAM1-215ENST00000533073 YDJCA8MPS7 323 aa15.99■□□□□ 0.15
NCAM1-215ENST00000533073 TRIM28Q13263 835 aaKnown RBP15.99■□□□□ 0.15
NCAM1-215ENST00000533073 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
NCAM1-215ENST00000533073 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
NCAM1-215ENST00000533073 BCL2L13Q9BXK5 485 aa15.99■□□□□ 0.15
NCAM1-215ENST00000533073 APAF1O14727 1248 aa15.98■□□□□ 0.15
NCAM1-215ENST00000533073 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
NCAM1-215ENST00000533073 CST9Q5W186 159 aa15.98■□□□□ 0.15
NCAM1-215ENST00000533073 CAPNS2Q96L46 248 aa15.98■□□□□ 0.15
NCAM1-215ENST00000533073 IRS4O14654 1257 aaPredicted RBP15.97■□□□□ 0.15
NCAM1-215ENST00000533073 GNAI1P63096 354 aa15.97■□□□□ 0.15
NCAM1-215ENST00000533073 MAP2K1Q02750 393 aaPredicted RBP15.97■□□□□ 0.15
NCAM1-215ENST00000533073 CALD1Q05682 793 aaKnown RBP15.97■□□□□ 0.15
NCAM1-215ENST00000533073 PAXIP1Q6ZW49 1069 aaPredicted RBP15.97■□□□□ 0.15
NCAM1-215ENST00000533073 NSFL1CQ9UNZ2 370 aaKnown RBP15.97■□□□□ 0.15
NCAM1-215ENST00000533073 LBX1P52954 281 aa15.97■□□□□ 0.15
NCAM1-215ENST00000533073 WASHC4Q2M389 1173 aa15.97■□□□□ 0.15
NCAM1-215ENST00000533073 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
NCAM1-215ENST00000533073 PHAXQ9H814 394 aaKnown RBP15.97■□□□□ 0.15
NCAM1-215ENST00000533073 TLL2Q9Y6L7 1015 aa15.97■□□□□ 0.15
NCAM1-215ENST00000533073 ECE1P42892 770 aa15.96■□□□□ 0.15
NCAM1-215ENST00000533073 GPSM2P81274 684 aa15.96■□□□□ 0.15
NCAM1-215ENST00000533073 ZBTB38Q8NAP3 1195 aaPredicted RBP15.96■□□□□ 0.15
NCAM1-215ENST00000533073 TRPM4Q8TD43 1214 aa15.96■□□□□ 0.15
NCAM1-215ENST00000533073 ZC3H15Q8WU90 426 aaKnown RBP15.96■□□□□ 0.15
NCAM1-215ENST00000533073 GLIS2Q9BZE0 524 aaPredicted RBP15.96■□□□□ 0.15
NCAM1-215ENST00000533073 PGAP2Q9UHJ9 254 aa15.96■□□□□ 0.15
NCAM1-215ENST00000533073 CNOT7Q9UIV1 285 aaKnown RBP15.96■□□□□ 0.15
NCAM1-215ENST00000533073 SHTN1A0MZ66 631 aa15.95■□□□□ 0.14
NCAM1-215ENST00000533073 ELL2O00472 640 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms