RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PRR5LQ6MZQ0 368 aa17.9■□□□□ 0.46
COL16A1-217ENST00000532877 TPTE2Q6XPS3 522 aa17.9■□□□□ 0.46
COL16A1-217ENST00000532877 PLA2G12BQ9BX93 195 aa17.9■□□□□ 0.46
COL16A1-217ENST00000532877 PCDHB15Q9Y5E8 787 aa17.9■□□□□ 0.46
COL16A1-217ENST00000532877 GTF3C3Q9Y5Q9 886 aa17.9■□□□□ 0.46
COL16A1-217ENST00000532877 GTF2E1P29083 439 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-217ENST00000532877 CEP85Q6P2H3 762 aa17.89■□□□□ 0.45
COL16A1-217ENST00000532877 ANKRD44Q8N8A2 993 aa17.89■□□□□ 0.45
COL16A1-217ENST00000532877 ZNF526Q8TF50 670 aaPredicted RBP17.89■□□□□ 0.45
COL16A1-217ENST00000532877 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
COL16A1-217ENST00000532877 RIC1Q4ADV7 1423 aa17.89■□□□□ 0.45
COL16A1-217ENST00000532877 NPHP1O15259 732 aa17.88■□□□□ 0.45
COL16A1-217ENST00000532877 HCLS1P14317 486 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-217ENST00000532877 FOXO4P98177 505 aa17.88■□□□□ 0.45
COL16A1-217ENST00000532877 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-217ENST00000532877 ANKRD31Q8N7Z5 1873 aa17.87■□□□□ 0.45
COL16A1-217ENST00000532877 PDE8AO60658 829 aa17.87■□□□□ 0.45
COL16A1-217ENST00000532877 HSP90B1P14625 803 aaKnown RBP17.87■□□□□ 0.45
COL16A1-217ENST00000532877 APLP1P51693 650 aa17.87■□□□□ 0.45
COL16A1-217ENST00000532877 ST5P78524 1137 aa17.87■□□□□ 0.45
COL16A1-217ENST00000532877 SLC10A5Q5PT55 438 aa17.87■□□□□ 0.45
COL16A1-217ENST00000532877 CCDC24Q8N4L8 307 aa17.87■□□□□ 0.45
COL16A1-217ENST00000532877 CTSWP56202 376 aa17.86■□□□□ 0.45
COL16A1-217ENST00000532877 MTX1Q13505 466 aa17.86■□□□□ 0.45
COL16A1-217ENST00000532877 SIRT2Q8IXJ6 389 aa17.86■□□□□ 0.45
COL16A1-217ENST00000532877 RPAP2Q8IXW5 612 aaPredicted RBP17.86■□□□□ 0.45
COL16A1-217ENST00000532877 PNMA6EA0A0J9YXQ4 647 aa17.85■□□□□ 0.45
COL16A1-217ENST00000532877 LMBR1LQ6UX01 489 aa17.85■□□□□ 0.45
COL16A1-217ENST00000532877 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
COL16A1-217ENST00000532877 PPP4R2Q9NY27 417 aa17.85■□□□□ 0.45
COL16A1-217ENST00000532877 CSF1RP07333 972 aa17.84■□□□□ 0.45
COL16A1-217ENST00000532877 ATP8B2P98198 1209 aa17.84■□□□□ 0.45
COL16A1-217ENST00000532877 SRGAP3O43295 1099 aa17.83■□□□□ 0.44
COL16A1-217ENST00000532877 FAM161AQ3B820 660 aa17.83■□□□□ 0.44
COL16A1-217ENST00000532877 TTLL11Q8NHH1 800 aa17.83■□□□□ 0.44
COL16A1-217ENST00000532877 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.44
COL16A1-217ENST00000532877 C10orf71Q711Q0 1435 aa17.82■□□□□ 0.44
COL16A1-217ENST00000532877 ARFGEF1Q9Y6D6 1849 aa17.82■□□□□ 0.44
COL16A1-217ENST00000532877 COL11A2P13942 1736 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-217ENST00000532877 HMMRO75330 724 aa17.82■□□□□ 0.44
COL16A1-217ENST00000532877 TOMM70O94826 608 aa17.82■□□□□ 0.44
COL16A1-217ENST00000532877 HDAC1Q13547 482 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-217ENST00000532877 POLA2Q14181 598 aa17.82■□□□□ 0.44
COL16A1-217ENST00000532877 SSH3Q8TE77 659 aa17.82■□□□□ 0.44
COL16A1-217ENST00000532877 NLRP3Q96P20 1036 aa17.82■□□□□ 0.44
COL16A1-217ENST00000532877 CCDC85AQ96PX6 553 aaPredicted RBP17.82■□□□□ 0.44
COL16A1-217ENST00000532877 RTL9Q8NET4 1388 aa17.81■□□□□ 0.44
COL16A1-217ENST00000532877 SF3B3Q15393 1217 aaKnown RBP17.81■□□□□ 0.44
COL16A1-217ENST00000532877 CCDC152Q4G0S7 254 aa17.81■□□□□ 0.44
COL16A1-217ENST00000532877 B4GALNT3Q6L9W6 998 aa17.81■□□□□ 0.44
COL16A1-217ENST00000532877 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
COL16A1-217ENST00000532877 GREM2Q9H772 168 aa17.81■□□□□ 0.44
COL16A1-217ENST00000532877 JMYQ8N9B5 988 aa17.8■□□□□ 0.44
COL16A1-217ENST00000532877 BRIP1Q9BX63 1249 aa17.8■□□□□ 0.44
COL16A1-217ENST00000532877 IGHDP01880 384 aa17.79■□□□□ 0.44
COL16A1-217ENST00000532877 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-217ENST00000532877 CRY2Q49AN0 593 aa17.79■□□□□ 0.44
COL16A1-217ENST00000532877 RWDD1Q9H446 243 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-217ENST00000532877 COL4A1P02462 1669 aa17.79■□□□□ 0.44
COL16A1-217ENST00000532877 SPEF2Q9C093 1822 aa17.78■□□□□ 0.44
COL16A1-217ENST00000532877 KLRG2A4D1S0 409 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-217ENST00000532877 ITGA6P23229 1130 aa17.78■□□□□ 0.44
COL16A1-217ENST00000532877 IFIT5Q13325 482 aaKnown RBP17.78■□□□□ 0.44
COL16A1-217ENST00000532877 CCDC57Q2TAC2 916 aa17.78■□□□□ 0.44
COL16A1-217ENST00000532877 WWC3Q9ULE0 1092 aa17.78■□□□□ 0.44
COL16A1-217ENST00000532877 SBF1O95248 1867 aa17.78■□□□□ 0.44
COL16A1-217ENST00000532877 TAF1P21675 1872 aa17.78■□□□□ 0.44
COL16A1-217ENST00000532877 KDM2BQ8NHM5 1336 aa17.77■□□□□ 0.44
COL16A1-217ENST00000532877 PDE6BP35913 854 aa17.77■□□□□ 0.44
COL16A1-217ENST00000532877 PTPN12Q05209 780 aaKnown RBP17.77■□□□□ 0.44
COL16A1-217ENST00000532877 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-217ENST00000532877 KLHDC4Q8TBB5 520 aa17.77■□□□□ 0.44
COL16A1-217ENST00000532877 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
COL16A1-217ENST00000532877 PA2G4Q9UQ80 394 aaKnown RBP17.77■□□□□ 0.44
COL16A1-217ENST00000532877 ANKRD18BA2A2Z9 1011 aa17.76■□□□□ 0.43
COL16A1-217ENST00000532877 COPRSQ9NQ92 184 aa17.76■□□□□ 0.43
COL16A1-217ENST00000532877 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
COL16A1-217ENST00000532877 RPGRQ92834 1020 aaKnown RBP17.75■□□□□ 0.43
COL16A1-217ENST00000532877 ZNF594Q96JF6 807 aaPredicted RBP17.75■□□□□ 0.43
COL16A1-217ENST00000532877 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
COL16A1-217ENST00000532877 NMRK2Q9NPI5 230 aa17.75■□□□□ 0.43
COL16A1-217ENST00000532877 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
COL16A1-217ENST00000532877 TAF7LQ5H9L4 462 aa17.74■□□□□ 0.43
COL16A1-217ENST00000532877 DDX46Q7L014 1031 aaKnown RBP17.74■□□□□ 0.43
COL16A1-217ENST00000532877 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
COL16A1-217ENST00000532877 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
COL16A1-217ENST00000532877 CDC5LQ99459 802 aaKnown RBP17.74■□□□□ 0.43
COL16A1-217ENST00000532877 SIL1Q9H173 461 aa17.74■□□□□ 0.43
COL16A1-217ENST00000532877 EXOC6BQ9Y2D4 811 aa17.74■□□□□ 0.43
COL16A1-217ENST00000532877 NOP58Q9Y2X3 529 aaKnown RBP17.74■□□□□ 0.43
COL16A1-217ENST00000532877 SRGNP10124 158 aa17.73■□□□□ 0.43
COL16A1-217ENST00000532877 HOXA10P31260 410 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-217ENST00000532877 C2CD5Q86YS7 1000 aa17.73■□□□□ 0.43
COL16A1-217ENST00000532877 SMC5Q8IY18 1101 aa17.73■□□□□ 0.43
COL16A1-217ENST00000532877 RBM46Q8TBY0 533 aaKnown RBP17.73■□□□□ 0.43
COL16A1-217ENST00000532877 GCC1Q96CN9 775 aa17.73■□□□□ 0.43
COL16A1-217ENST00000532877 NPR1P16066 1061 aa17.72■□□□□ 0.43
COL16A1-217ENST00000532877 GRAPQ13588 217 aa17.72■□□□□ 0.43
COL16A1-217ENST00000532877 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
COL16A1-217ENST00000532877 CELF1Q92879 486 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms