RNA–Protein interactions for RNA: ENST00000532656.6

CTSB-226, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-226ENST00000532656 SH3TC1Q8TE82 1336 aa22.42■■□□□ 1.18
CTSB-226ENST00000532656 GMPSP49915 693 aaPredicted RBP22.42■■□□□ 1.18
CTSB-226ENST00000532656 GRM1Q13255 1194 aa22.42■■□□□ 1.18
CTSB-226ENST00000532656 CST9Q5W186 159 aa22.42■■□□□ 1.18
CTSB-226ENST00000532656 CHPF2Q9P2E5 772 aa22.42■■□□□ 1.18
CTSB-226ENST00000532656 CHL1O00533 1208 aa22.41■■□□□ 1.18
CTSB-226ENST00000532656 HSPA8P11142 646 aaKnown RBP22.41■■□□□ 1.18
CTSB-226ENST00000532656 MAP2K1Q02750 393 aaPredicted RBP22.41■■□□□ 1.18
CTSB-226ENST00000532656 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
CTSB-226ENST00000532656 GRAPQ13588 217 aa22.41■■□□□ 1.18
CTSB-226ENST00000532656 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
CTSB-226ENST00000532656 CAPNS2Q96L46 248 aa22.41■■□□□ 1.18
CTSB-226ENST00000532656 MYBBP1AQ9BQG0 1328 aaKnown RBP22.4■■□□□ 1.18
CTSB-226ENST00000532656 RAD17O75943 681 aa22.4■■□□□ 1.18
CTSB-226ENST00000532656 CIAPIN1Q6FI81 312 aa22.4■■□□□ 1.18
CTSB-226ENST00000532656 CYP4F22Q6NT55 531 aa22.4■■□□□ 1.18
CTSB-226ENST00000532656 TRIM35Q9UPQ4 493 aa22.4■■□□□ 1.18
CTSB-226ENST00000532656 THSD7BQ9C0I4 1608 aa22.39■■□□□ 1.18
CTSB-226ENST00000532656 HDGFL1Q5TGJ6 251 aa22.39■■□□□ 1.17
CTSB-226ENST00000532656 DDX60Q8IY21 1712 aaKnown RBP22.39■■□□□ 1.17
CTSB-226ENST00000532656 DUOX1Q9NRD9 1551 aa22.38■■□□□ 1.17
CTSB-226ENST00000532656 ECE1P42892 770 aa22.38■■□□□ 1.17
CTSB-226ENST00000532656 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
CTSB-226ENST00000532656 RUNDC1Q96C34 613 aa22.38■■□□□ 1.17
CTSB-226ENST00000532656 BCL2L13Q9BXK5 485 aa22.38■■□□□ 1.17
CTSB-226ENST00000532656 TLL2Q9Y6L7 1015 aa22.38■■□□□ 1.17
CTSB-226ENST00000532656 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
CTSB-226ENST00000532656 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
CTSB-226ENST00000532656 LRRC37AA6NMS7 1700 aa22.37■■□□□ 1.17
CTSB-226ENST00000532656 YDJCA8MPS7 323 aa22.36■■□□□ 1.17
CTSB-226ENST00000532656 TNIP1Q15025 636 aa22.36■■□□□ 1.17
CTSB-226ENST00000532656 GPR101Q96P66 508 aaPredicted RBP22.36■■□□□ 1.17
CTSB-226ENST00000532656 GLIS2Q9BZE0 524 aaPredicted RBP22.36■■□□□ 1.17
CTSB-226ENST00000532656 CDHR2Q9BYE9 1310 aa22.35■■□□□ 1.17
CTSB-226ENST00000532656 ATP5J2-PTCD1G3V325 749 aa22.35■■□□□ 1.17
CTSB-226ENST00000532656 CELF2O95319 508 aaKnown RBP22.35■■□□□ 1.17
CTSB-226ENST00000532656 ANKRD13DQ6ZTN6 518 aa22.35■■□□□ 1.17
CTSB-226ENST00000532656 FAM89AQ96GI7 184 aa22.35■■□□□ 1.17
CTSB-226ENST00000532656 SHTN1A0MZ66 631 aa22.34■■□□□ 1.17
CTSB-226ENST00000532656 RTL5Q5HYW3 569 aaPredicted RBP22.34■■□□□ 1.17
CTSB-226ENST00000532656 TMC4Q7Z404 712 aa22.34■■□□□ 1.17
CTSB-226ENST00000532656 TRPM4Q8TD43 1214 aa22.34■■□□□ 1.17
CTSB-226ENST00000532656 ISCA1Q9BUE6 129 aa22.34■■□□□ 1.17
CTSB-226ENST00000532656 BEGAINQ9BUH8 593 aa22.34■■□□□ 1.17
CTSB-226ENST00000532656 DBF4Q9UBU7 674 aaPredicted RBP22.34■■□□□ 1.17
CTSB-226ENST00000532656 COL4A1P02462 1669 aa22.33■■□□□ 1.17
CTSB-226ENST00000532656 AOC2O75106 756 aa22.33■■□□□ 1.17
CTSB-226ENST00000532656 HOXB7P09629 217 aa22.33■■□□□ 1.17
CTSB-226ENST00000532656 HIRAP54198 1017 aaPredicted RBP22.33■■□□□ 1.17
CTSB-226ENST00000532656 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.17
CTSB-226ENST00000532656 ZNF408Q9H9D4 720 aa22.33■■□□□ 1.17
CTSB-226ENST00000532656 CNOT7Q9UIV1 285 aaKnown RBP22.33■■□□□ 1.17
CTSB-226ENST00000532656 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.17
CTSB-226ENST00000532656 SAPCD2Q86UD0 394 aa22.32■■□□□ 1.16
CTSB-226ENST00000532656 PGAP2Q9UHJ9 254 aa22.32■■□□□ 1.16
CTSB-226ENST00000532656 NSFL1CQ9UNZ2 370 aaKnown RBP22.32■■□□□ 1.16
CTSB-226ENST00000532656 SF3B3Q15393 1217 aaKnown RBP22.31■■□□□ 1.16
CTSB-226ENST00000532656 WASHC4Q2M389 1173 aa22.31■■□□□ 1.16
CTSB-226ENST00000532656 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
CTSB-226ENST00000532656 MICALL2Q8IY33 904 aa22.31■■□□□ 1.16
CTSB-226ENST00000532656 DBNDD1Q9H9R9 158 aa22.31■■□□□ 1.16
CTSB-226ENST00000532656 ZBTB12Q9Y330 459 aaPredicted RBP22.31■■□□□ 1.16
CTSB-226ENST00000532656 H7C1D1 291 aa22.3■■□□□ 1.16
CTSB-226ENST00000532656 RIMBP2O15034 1052 aa22.3■■□□□ 1.16
CTSB-226ENST00000532656 ZC3H15Q8WU90 426 aaKnown RBP22.3■■□□□ 1.16
CTSB-226ENST00000532656 ABHD8Q96I13 439 aa22.3■■□□□ 1.16
CTSB-226ENST00000532656 CFAP44Q96MT7 982 aa22.3■■□□□ 1.16
CTSB-226ENST00000532656 HYPKQ9NX55 129 aa22.3■■□□□ 1.16
CTSB-226ENST00000532656 TSKSQ9UJT2 592 aa22.3■■□□□ 1.16
CTSB-226ENST00000532656 C6orf229H3BNL8 230 aa22.29■■□□□ 1.16
CTSB-226ENST00000532656 PSMD14O00487 310 aa22.29■■□□□ 1.16
CTSB-226ENST00000532656 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
CTSB-226ENST00000532656 POLLQ9UGP5 575 aa22.29■■□□□ 1.16
CTSB-226ENST00000532656 IRS4O14654 1257 aaPredicted RBP22.28■■□□□ 1.16
CTSB-226ENST00000532656 MAP2K2P36507 400 aa22.28■■□□□ 1.16
CTSB-226ENST00000532656 GPSM2P81274 684 aa22.28■■□□□ 1.16
CTSB-226ENST00000532656 CDC37L1Q7L3B6 337 aa22.28■■□□□ 1.16
CTSB-226ENST00000532656 SAMD7Q7Z3H4 446 aa22.27■■□□□ 1.16
CTSB-226ENST00000532656 DOK7Q18PE1 504 aa22.26■■□□□ 1.15
CTSB-226ENST00000532656 DLK2Q6UY11 383 aa22.26■■□□□ 1.15
CTSB-226ENST00000532656 RIC3Q7Z5B4 369 aa22.26■■□□□ 1.15
CTSB-226ENST00000532656 USP48Q86UV5 1035 aa22.26■■□□□ 1.15
CTSB-226ENST00000532656 DPF2Q92785 391 aa22.26■■□□□ 1.15
CTSB-226ENST00000532656 ECE2O60344 883 aa22.25■■□□□ 1.15
CTSB-226ENST00000532656 EGFRP00533 1210 aa22.25■■□□□ 1.15
CTSB-226ENST00000532656 TRIM28Q13263 835 aaKnown RBP22.25■■□□□ 1.15
CTSB-226ENST00000532656 TBC1D10BQ4KMP7 808 aaPredicted RBP22.25■■□□□ 1.15
CTSB-226ENST00000532656 HHIPL1Q96JK4 782 aa22.25■■□□□ 1.15
CTSB-226ENST00000532656 PHAXQ9H814 394 aaKnown RBP22.25■■□□□ 1.15
CTSB-226ENST00000532656 KCNQ5Q9NR82 932 aa22.25■■□□□ 1.15
CTSB-226ENST00000532656 ELL2O00472 640 aaPredicted RBP22.24■■□□□ 1.15
CTSB-226ENST00000532656 RPS8P62241 208 aaKnown RBP22.24■■□□□ 1.15
CTSB-226ENST00000532656 GOLGA2Q08379 1002 aa22.24■■□□□ 1.15
CTSB-226ENST00000532656 EYA3Q99504 573 aa22.24■■□□□ 1.15
CTSB-226ENST00000532656 RTL9Q8NET4 1388 aa22.24■■□□□ 1.15
CTSB-226ENST00000532656 ZNF853P0CG23 659 aa22.23■■□□□ 1.15
CTSB-226ENST00000532656 ZBTB38Q8NAP3 1195 aaPredicted RBP22.23■■□□□ 1.15
CTSB-226ENST00000532656 TBC1D16Q8TBP0 767 aa22.23■■□□□ 1.15
CTSB-226ENST00000532656 SEC31BQ9NQW1 1179 aa22.23■■□□□ 1.15
CTSB-226ENST00000532656 RBM26Q5T8P6 1007 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms