RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 KIAA1211Q6ZU35 1233 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 XAGE3Q8WTP9 111 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 SYAP1Q96A49 352 aaPredicted RBP6.96□□□□□ -1.3
RDX-213ENST00000532461 PLA2G12BQ9BX93 195 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 DIAPH3Q9NSV4 1193 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 MTMR6Q9Y217 621 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 ATP6V1DQ9Y5K8 247 aa6.96□□□□□ -1.3
RDX-213ENST00000532461 DLEC1Q9Y238 1755 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 TAF5LO75529 589 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 PSMA5P28066 241 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 UBE2HP62256 183 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 ADCK5Q3MIX3 580 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 TNNI3KQ59H18 835 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 CWC27Q6UX04 472 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 AACSQ86V21 672 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 CYP46A1Q9Y6A2 500 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 FPGT-TNNI3KV9GXZ4 949 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 DOT1LQ8TEK3 1739 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 ATF3P18847 181 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 RPS6KB1P23443 525 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 RBM43Q6ZSC3 357 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 COPS6Q7L5N1 327 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 USP48Q86UV5 1035 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 RBM33Q96EV2 1170 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 CARD10Q9BWT7 1032 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 PDRG1Q9NUG6 133 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 PA2G4Q9UQ80 394 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 MYO5AQ9Y4I1 1855 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 EVCP57679 992 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 TOB2Q14106 344 aaPredicted RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 KRT32Q14532 448 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 ATG9AQ7Z3C6 839 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 VSIG10Q8N0Z9 540 aa6.95□□□□□ -1.3
RDX-213ENST00000532461 UPF3BQ9BZI7 483 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 DBNLQ9UJU6 430 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 RBM8AQ9Y5S9 174 aaKnown RBP6.95□□□□□ -1.3
RDX-213ENST00000532461 A0A0D9SFI3 127 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 NBPF26B4DH59 902 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 LARGE1O95461 756 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 CASTP20810 708 aaKnown RBP6.94□□□□□ -1.3
RDX-213ENST00000532461 CSPP1Q1MSJ5 1256 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 CCDC183Q5T5S1 534 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 NBPF14Q5TI25 921 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 NBPF10Q6P3W6 841 aaKnown RBP6.94□□□□□ -1.3
RDX-213ENST00000532461 RIC3Q7Z5B4 369 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 NBPF15Q8N660 670 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 RNF216Q9NWF9 866 aaPredicted RBP6.94□□□□□ -1.3
RDX-213ENST00000532461 TLR7Q9NYK1 1049 aaKnown RBP6.94□□□□□ -1.3
RDX-213ENST00000532461 USP16Q9Y5T5 823 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 ZKSCAN1P17029 563 aaPredicted RBP6.94□□□□□ -1.3
RDX-213ENST00000532461 ME3Q16798 604 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 CCDC191Q8NCU4 936 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 HELLSQ9NRZ9 838 aa6.94□□□□□ -1.3
RDX-213ENST00000532461 TRHP20396 242 aaPredicted RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 BRINP3Q76B58 766 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 CNKSR2Q8WXI2 1034 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 ZNF512BQ96KM6 892 aaPredicted RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 FAM227BQ96M60 508 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 ISCA1Q9BUE6 129 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 SALL1Q9NSC2 1324 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 OFD1O75665 1012 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 MAP4K4O95819 1239 aaPredicted RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 SMARCC2Q8TAQ2 1214 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 MYD88Q99836 296 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 LLPHQ9BRT6 129 aaKnown RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 DSCC1Q9BVC3 393 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 RTN4Q9NQC3 1192 aaKnown RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 TPCN1Q9ULQ1 816 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 WDR19Q8NEZ3 1342 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 GADD45BO75293 160 aaPredicted RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 PDCP20941 246 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 PRPF40BQ6NWY9 871 aaKnown RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 TSPY26PQ9H489 355 aa6.93□□□□□ -1.3
RDX-213ENST00000532461 RBM27Q9P2N5 1060 aaKnown RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 U3KPZ7 1027 aaPredicted RBP6.93□□□□□ -1.3
RDX-213ENST00000532461 CDHR2Q9BYE9 1310 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 SLC39A6Q13433 755 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 KBTBD3Q8NAB2 608 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 JAKMIP1Q96N16 626 aaKnown RBP6.92□□□□□ -1.3
RDX-213ENST00000532461 SYCE3A1L190 88 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 CSF1RP07333 972 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 HMGB1P09429 215 aaKnown RBP6.92□□□□□ -1.3
RDX-213ENST00000532461 GJB2P29033 226 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 ZC3H6P61129 1189 aaKnown RBP6.92□□□□□ -1.3
RDX-213ENST00000532461 EXOSC10Q01780 885 aaKnown RBP6.92□□□□□ -1.3
RDX-213ENST00000532461 OS9Q13438 667 aaPredicted RBP6.92□□□□□ -1.3
RDX-213ENST00000532461 ZNF589Q86UQ0 364 aaPredicted RBP6.92□□□□□ -1.3
RDX-213ENST00000532461 TTC5Q8N0Z6 440 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 NLRP2Q9NX02 1062 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 SMC3Q9UQE7 1217 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 ZKSCAN5Q9Y2L8 839 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 RIC1Q4ADV7 1423 aa6.92□□□□□ -1.3
RDX-213ENST00000532461 COL24A1Q17RW2 1714 aa6.91□□□□□ -1.3
RDX-213ENST00000532461 IL15P40933 162 aaPredicted RBP6.91□□□□□ -1.3
RDX-213ENST00000532461 TFCP2Q12800 502 aa6.91□□□□□ -1.3
RDX-213ENST00000532461 MCMDC2Q4G0Z9 681 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms