RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
NXF1-213ENST00000532297 KIF18AQ8NI77 898 aa17.59■□□□□ 0.41
NXF1-213ENST00000532297 CHMP4AQ9BY43 222 aa17.59■□□□□ 0.41
NXF1-213ENST00000532297 CKAP2LQ8IYA6 745 aa17.59■□□□□ 0.41
NXF1-213ENST00000532297 ZNF592Q92610 1267 aa17.59■□□□□ 0.41
NXF1-213ENST00000532297 TPCN1Q9ULQ1 816 aa17.59■□□□□ 0.41
NXF1-213ENST00000532297 HOXB7P09629 217 aa17.58■□□□□ 0.41
NXF1-213ENST00000532297 ANO6Q4KMQ2 910 aa17.58■□□□□ 0.41
NXF1-213ENST00000532297 KSR2Q6VAB6 950 aa17.58■□□□□ 0.41
NXF1-213ENST00000532297 ZNF589Q86UQ0 364 aaPredicted RBP17.58■□□□□ 0.41
NXF1-213ENST00000532297 CBX8Q9HC52 389 aa17.58■□□□□ 0.41
NXF1-213ENST00000532297 LIG1P18858 919 aa17.58■□□□□ 0.4
NXF1-213ENST00000532297 ZBTB22O15209 634 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 IGKV5-2P06315 115 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 CCDC171Q6TFL3 1326 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 TTC6Q86TZ1 520 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 ZNF75DP51815 510 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 SLFNL1Q499Z3 407 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 TNMDQ9H2S6 317 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 TTC41PQ6P2S7 1318 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 GRM8O00222 908 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 CREB3L3Q68CJ9 461 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 CDC37L1Q7L3B6 337 aa17.57■□□□□ 0.4
NXF1-213ENST00000532297 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 TERF2Q15554 542 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 RUFY2Q8WXA3 655 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 C5P01031 1676 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.56■□□□□ 0.4
NXF1-213ENST00000532297 KRT85P78386 507 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 PDIA6Q15084 440 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 CEP135Q66GS9 1140 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 PLA2G4DQ86XP0 818 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 KRT222Q8N1A0 295 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
NXF1-213ENST00000532297 CHD2O14647 1828 aaKnown RBP17.56■□□□□ 0.4
NXF1-213ENST00000532297 USP42Q9H9J4 1324 aaKnown RBP17.55■□□□□ 0.4
NXF1-213ENST00000532297 ARHGEF25Q86VW2 580 aa17.55■□□□□ 0.4
NXF1-213ENST00000532297 CACTINQ8WUQ7 758 aaKnown RBP17.55■□□□□ 0.4
NXF1-213ENST00000532297 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
NXF1-213ENST00000532297 FOSBP53539 338 aa17.55■□□□□ 0.4
NXF1-213ENST00000532297 NECTIN1Q15223 517 aa17.55■□□□□ 0.4
NXF1-213ENST00000532297 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.55■□□□□ 0.4
NXF1-213ENST00000532297 MYD88Q99836 296 aa17.55■□□□□ 0.4
NXF1-213ENST00000532297 DACT1Q9NYF0 836 aa17.55■□□□□ 0.4
NXF1-213ENST00000532297 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
NXF1-213ENST00000532297 MTX1Q13505 466 aa17.54■□□□□ 0.4
NXF1-213ENST00000532297 RIC3Q7Z5B4 369 aa17.54■□□□□ 0.4
NXF1-213ENST00000532297 SLC27A2O14975 620 aa17.54■□□□□ 0.4
NXF1-213ENST00000532297 CCDC66A2RUB6 948 aa17.53■□□□□ 0.4
NXF1-213ENST00000532297 GOLGA6L4A6NEF3 574 aa17.53■□□□□ 0.4
NXF1-213ENST00000532297 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
NXF1-213ENST00000532297 ZNF397Q8NF99 534 aaPredicted RBP17.53■□□□□ 0.4
NXF1-213ENST00000532297 XAGE3Q8WTP9 111 aa17.53■□□□□ 0.4
NXF1-213ENST00000532297 GPATCH3Q96I76 525 aa17.53■□□□□ 0.4
NXF1-213ENST00000532297 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
NXF1-213ENST00000532297 SEC62Q99442 399 aaKnown RBP17.53■□□□□ 0.4
NXF1-213ENST00000532297 ZSWIM6Q9HCJ5 1215 aa17.53■□□□□ 0.4
NXF1-213ENST00000532297 KMT5BQ4FZB7 885 aa17.53■□□□□ 0.4
NXF1-213ENST00000532297 LARP1BQ659C4 914 aaKnown RBP17.53■□□□□ 0.4
NXF1-213ENST00000532297 LRRC2Q9BYS8 371 aa17.53■□□□□ 0.4
NXF1-213ENST00000532297 SH2B1Q9NRF2 756 aaPredicted RBP17.53■□□□□ 0.4
NXF1-213ENST00000532297 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.53■□□□□ 0.43e-8■■■■□ 20
NXF1-213ENST00000532297 V9GYY5 206 aaPredicted RBP17.53■□□□□ 0.4
NXF1-213ENST00000532297 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
NXF1-213ENST00000532297 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 VPS53Q5VIR6 699 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 CCDC144CPQ8IYA2 1237 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 NFATC2IPQ8NCF5 419 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 EVI5LQ96CN4 794 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 COL15A1P39059 1388 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 CABLES1Q8TDN4 633 aa17.52■□□□□ 0.4
NXF1-213ENST00000532297 TFIP11Q9UBB9 837 aaKnown RBP17.52■□□□□ 0.4
NXF1-213ENST00000532297 CDK11BP21127 795 aaKnown RBP17.51■□□□□ 0.39
NXF1-213ENST00000532297 ZNF165P49910 485 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
NXF1-213ENST00000532297 ZNF215Q9UL58 517 aaPredicted RBP17.51■□□□□ 0.39
NXF1-213ENST00000532297 ELP1O95163 1332 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 ALDH1L1O75891 902 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 LINS1Q8NG48 757 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 NLRP2Q9NX02 1062 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 ERC1Q8IUD2 1116 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 DNAJC25Q9H1X3 360 aa17.51■□□□□ 0.39
NXF1-213ENST00000532297 JAK2O60674 1132 aa17.5■□□□□ 0.39
NXF1-213ENST00000532297 ANKLE2Q86XL3 938 aa17.5■□□□□ 0.39
NXF1-213ENST00000532297 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
NXF1-213ENST00000532297 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
NXF1-213ENST00000532297 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
NXF1-213ENST00000532297 NPHP4O75161 1426 aaPredicted RBP17.5■□□□□ 0.39
NXF1-213ENST00000532297 USP27XA6NNY8 438 aa17.5■□□□□ 0.39
NXF1-213ENST00000532297 VGLL3A8MV65 326 aa17.5■□□□□ 0.39
NXF1-213ENST00000532297 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
NXF1-213ENST00000532297 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
NXF1-213ENST00000532297 ADGRL3Q9HAR2 1447 aa17.5■□□□□ 0.39
NXF1-213ENST00000532297 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
NXF1-213ENST00000532297 ERICH4A6NGS2 130 aa17.49■□□□□ 0.39
NXF1-213ENST00000532297 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms