RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 ATF7IPQ6VMQ6 1270 aa26.26■■□□□ 1.79
CCS-207ENST00000531990 PLA2G12BQ9BX93 195 aa26.26■■□□□ 1.79
CCS-207ENST00000531990 BBOX1O75936 387 aa26.25■■□□□ 1.79
CCS-207ENST00000531990 GRAPQ13588 217 aa26.25■■□□□ 1.79
CCS-207ENST00000531990 CCDC93Q567U6 631 aa26.25■■□□□ 1.79
CCS-207ENST00000531990 ZKSCAN2Q63HK3 967 aa26.25■■□□□ 1.79
CCS-207ENST00000531990 GRAPLQ8TC17 118 aaPredicted RBP26.25■■□□□ 1.79
CCS-207ENST00000531990 CC2D2BQ6DHV5 1058 aa26.24■■□□□ 1.79
CCS-207ENST00000531990 C7orf43Q8WVR3 580 aa26.24■■□□□ 1.79
CCS-207ENST00000531990 TAF1P21675 1872 aa26.23■■□□□ 1.79
CCS-207ENST00000531990 FER1L6Q2WGJ9 1857 aa26.23■■□□□ 1.79
CCS-207ENST00000531990 TMC4Q7Z404 712 aa26.23■■□□□ 1.79
CCS-207ENST00000531990 CCDC85AQ96PX6 553 aaPredicted RBP26.23■■□□□ 1.79
CCS-207ENST00000531990 TRIM27P14373 513 aa26.22■■□□□ 1.79
CCS-207ENST00000531990 RTKN2Q8IZC4 609 aa26.22■■□□□ 1.79
CCS-207ENST00000531990 TTLL11Q8NHH1 800 aa26.22■■□□□ 1.79
CCS-207ENST00000531990 RCAN3Q9UKA8 241 aa26.22■■□□□ 1.79
CCS-207ENST00000531990 GOLGB1Q14789 3259 aaKnown RBP26.22■■□□□ 1.79
CCS-207ENST00000531990 GRIPAP1Q4V328 841 aa26.21■■□□□ 1.79
CCS-207ENST00000531990 UTYO14607 1347 aa26.2■■□□□ 1.79
CCS-207ENST00000531990 TAOK3Q9H2K8 898 aa26.2■■□□□ 1.78
CCS-207ENST00000531990 ATP6V0A2Q9Y487 856 aa26.2■■□□□ 1.78
CCS-207ENST00000531990 RTL9Q8NET4 1388 aa26.2■■□□□ 1.78
CCS-207ENST00000531990 NBPF7P0C2Y1 421 aaPredicted RBP26.19■■□□□ 1.78
CCS-207ENST00000531990 RPS8P62241 208 aaKnown RBP26.19■■□□□ 1.78
CCS-207ENST00000531990 SP8Q8IXZ3 490 aa26.19■■□□□ 1.78
CCS-207ENST00000531990 CELF1Q92879 486 aaKnown RBP26.19■■□□□ 1.78
CCS-207ENST00000531990 CDC5LQ99459 802 aaKnown RBP26.19■■□□□ 1.78
CCS-207ENST00000531990 SEC31BQ9NQW1 1179 aa26.19■■□□□ 1.78
CCS-207ENST00000531990 NFKBIEO00221 500 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 SBF1O95248 1867 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 YY1P25490 414 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 RASSF7Q02833 373 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 INTS3Q68E01 1043 aaKnown RBP26.18■■□□□ 1.78
CCS-207ENST00000531990 OLFM4Q6UX06 510 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 FTSJ3Q8IY81 847 aaKnown RBP26.18■■□□□ 1.78
CCS-207ENST00000531990 CLUAP1Q96AJ1 413 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 USP44Q9H0E7 712 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 GREM2Q9H772 168 aa26.18■■□□□ 1.78
CCS-207ENST00000531990 LTBP3Q9NS15 1303 aa26.17■■□□□ 1.78
CCS-207ENST00000531990 LMNB1P20700 586 aa26.17■■□□□ 1.78
CCS-207ENST00000531990 CHMP3Q9Y3E7 222 aa26.17■■□□□ 1.78
CCS-207ENST00000531990 CCDC88AQ3V6T2 1871 aa26.17■■□□□ 1.78
CCS-207ENST00000531990 CSF1RP07333 972 aa26.16■■□□□ 1.78
CCS-207ENST00000531990 FOXO4P98177 505 aa26.16■■□□□ 1.78
CCS-207ENST00000531990 FKBP4Q02790 459 aaKnown RBP eCLIP26.16■■□□□ 1.78
CCS-207ENST00000531990 ANKRD18AQ8IVF6 992 aa26.16■■□□□ 1.78
CCS-207ENST00000531990 SUCLG2Q96I99 432 aa26.16■■□□□ 1.78
CCS-207ENST00000531990 HDAC5Q9UQL6 1122 aa26.16■■□□□ 1.78
CCS-207ENST00000531990 C9orf131Q5VYM1 1079 aa26.15■■□□□ 1.78
CCS-207ENST00000531990 RNF181Q9P0P0 153 aa26.15■■□□□ 1.78
CCS-207ENST00000531990 TNNQ9UQP3 1299 aa26.15■■□□□ 1.78
CCS-207ENST00000531990 UBTFL1P0CB47 393 aaPredicted RBP26.14■■□□□ 1.78
CCS-207ENST00000531990 MS4A1P11836 297 aa26.14■■□□□ 1.78
CCS-207ENST00000531990 ITGA6P23229 1130 aa26.14■■□□□ 1.78
CCS-207ENST00000531990 FAM161AQ3B820 660 aa26.14■■□□□ 1.78
CCS-207ENST00000531990 LMBR1LQ6UX01 489 aa26.14■■□□□ 1.78
CCS-207ENST00000531990 DZIP1LQ8IYY4 767 aaKnown RBP26.14■■□□□ 1.78
CCS-207ENST00000531990 LRRC37AA6NMS7 1700 aa26.14■■□□□ 1.77
CCS-207ENST00000531990 ANKRD18BA2A2Z9 1011 aa26.13■■□□□ 1.77
CCS-207ENST00000531990 EPHA10Q5JZY3 1008 aa26.13■■□□□ 1.77
CCS-207ENST00000531990 PSMD1Q99460 953 aa26.13■■□□□ 1.77
CCS-207ENST00000531990 SPEF2Q9C093 1822 aa26.13■■□□□ 1.77
CCS-207ENST00000531990 IGHMBP2P38935 993 aaKnown RBP26.12■■□□□ 1.77
CCS-207ENST00000531990 IFIT5Q13325 482 aaKnown RBP26.12■■□□□ 1.77
CCS-207ENST00000531990 MPNDQ8N594 471 aa26.12■■□□□ 1.77
CCS-207ENST00000531990 COL4A1P02462 1669 aa26.12■■□□□ 1.77
CCS-207ENST00000531990 CCDC57Q2TAC2 916 aa26.11■■□□□ 1.77
CCS-207ENST00000531990 DPP8Q6V1X1 898 aaPredicted RBP26.11■■□□□ 1.77
CCS-207ENST00000531990 TMEM57Q8N5G2 664 aa26.11■■□□□ 1.77
CCS-207ENST00000531990 SNED1Q8TER0 1413 aa26.11■■□□□ 1.77
CCS-207ENST00000531990 DICER1Q9UPY3 1922 aaKnown RBP26.1■■□□□ 1.77
CCS-207ENST00000531990 GNAI3P08754 354 aa26.1■■□□□ 1.77
CCS-207ENST00000531990 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.1■■□□□ 1.77
CCS-207ENST00000531990 SUPT20HQ8NEM7 779 aa26.1■■□□□ 1.77
CCS-207ENST00000531990 KAZALD1Q96I82 304 aa26.1■■□□□ 1.77
CCS-207ENST00000531990 BICC1Q9H694 974 aaKnown RBP26.1■■□□□ 1.77
CCS-207ENST00000531990 MPHOSPH8Q99549 860 aa26.09■■□□□ 1.77
CCS-207ENST00000531990 BSDC1Q9NW68 430 aaPredicted RBP26.09■■□□□ 1.77
CCS-207ENST00000531990 NSFL1CQ9UNZ2 370 aaKnown RBP26.09■■□□□ 1.77
CCS-207ENST00000531990 UTRNP46939 3433 aa26.08■■□□□ 1.77
CCS-207ENST00000531990 TAF7LQ5H9L4 462 aa26.08■■□□□ 1.77
CCS-207ENST00000531990 SLC51AQ86UW1 340 aa26.08■■□□□ 1.77
CCS-207ENST00000531990 MEIS3Q99687 375 aa26.08■■□□□ 1.77
CCS-207ENST00000531990 ZNF277Q9NRM2 450 aaPredicted RBP26.08■■□□□ 1.77
CCS-207ENST00000531990 PRELPP51888 382 aa26.07■■□□□ 1.76
CCS-207ENST00000531990 RABL6Q3YEC7 729 aaPredicted RBP26.07■■□□□ 1.76
CCS-207ENST00000531990 ITPRIPQ8IWB1 547 aa26.07■■□□□ 1.76
CCS-207ENST00000531990 TIAM2Q8IVF5 1701 aa26.07■■□□□ 1.76
CCS-207ENST00000531990 IARSP41252 1262 aaKnown RBP26.06■■□□□ 1.76
CCS-207ENST00000531990 ANKRD44Q8N8A2 993 aa26.06■■□□□ 1.76
CCS-207ENST00000531990 ANKIB1Q9P2G1 1089 aa26.06■■□□□ 1.76
CCS-207ENST00000531990 ZC3H4Q9UPT8 1303 aaKnown RBP26.06■■□□□ 1.76
CCS-207ENST00000531990 RTFDC1Q9BY42 306 aaPredicted RBP26.05■■□□□ 1.76
CCS-207ENST00000531990 LRRFIP2Q9Y608 721 aaKnown RBP26.05■■□□□ 1.76
CCS-207ENST00000531990 RLBP1P12271 317 aa26.04■■□□□ 1.76
CCS-207ENST00000531990 GPSM2P81274 684 aa26.04■■□□□ 1.76
CCS-207ENST00000531990 PANK1Q8TE04 598 aa26.04■■□□□ 1.76
CCS-207ENST00000531990 VPS33BQ9H267 617 aa26.04■■□□□ 1.76
CCS-207ENST00000531990 C6orf229H3BNL8 230 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms