RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 FAM83BQ5T0W9 1011 aa6.51□□□□□ -1.37
ECHDC1-222ENST00000531967 LRRC27Q9C0I9 530 aa6.51□□□□□ -1.37
ECHDC1-222ENST00000531967 RASGRP1O95267 797 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 ERMP1Q7Z2K6 904 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 TSEN2Q8NCE0 465 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 JPH4Q96JJ6 628 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 COPRSQ9NQ92 184 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 PUF60Q9UHX1 559 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 ASAP1Q9ULH1 1129 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 R3HCC1Q9Y3T6 440 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 IFRD2Q12894 506 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 AXDND1Q5T1B0 1012 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 ALKBH2Q6NS38 261 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 PDCD7Q8N8D1 485 aaKnown RBP6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 CHAC2Q8WUX2 184 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 ERP27Q96DN0 273 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 POLG2Q9UHN1 485 aa6.5□□□□□ -1.37
ECHDC1-222ENST00000531967 CCDC180Q9P1Z9 1646 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 AKAP10O43572 662 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 RRM1P23921 792 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 TCEA2Q15560 299 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 C1QTNF12Q5T7M4 302 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 NBPF11Q86T75 865 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 SMAP1Q8IYB5 467 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 NKX2-3Q8TAU0 364 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 FBXO41Q8TF61 875 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 LUZP4Q9P127 313 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 AKAP2Q9Y2D5 859 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 DAAM1Q9Y4D1 1078 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 PCDHB9Q9Y5E1 797 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 IFIT2P09913 472 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 VARSP26640 1264 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 ST13P50502 369 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 MEI1Q5TIA1 1274 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 THNSL2Q86YJ6 484 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 SUGP1Q8IWZ8 645 aaKnown RBP6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 PCDH10Q9P2E7 1040 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 MCM8Q9UJA3 840 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 STRIP2Q9ULQ0 834 aa6.49□□□□□ -1.37
ECHDC1-222ENST00000531967 WASLO00401 505 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 TCEA3O75764 348 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 STAT3P40763 770 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 GEMIN4P57678 1058 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 SLC4A8Q2Y0W8 1093 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 Q3C1V9 767 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 OXLD1Q5BKU9 147 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 CPXCR1Q8N123 301 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 ATL2Q8NHH9 583 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 ZNF622Q969S3 477 aaKnown RBP eCLIP6.48□□□□□ -1.371e-7■□□□□ 9.8
ECHDC1-222ENST00000531967 SPON2Q9BUD6 331 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 RBSNQ9H1K0 784 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 DNAJC25Q9H1X3 360 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 NGRNQ9NPE2 291 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 PRKAG3Q9UGI9 489 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 DOLKQ9UPQ8 538 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 PLAAQ9Y263 795 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 CD2APQ9Y5K6 639 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 ALDH1L2Q3SY69 923 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 CLIC5Q9NZA1 410 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 RABGAP1Q9Y3P9 1069 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 PCDHGA11Q9Y5H2 935 aa6.48□□□□□ -1.37
ECHDC1-222ENST00000531967 PRRT4C9JH25 899 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 GOLIM4O00461 696 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 NFKB2Q00653 900 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 TAF1CQ15572 869 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 ANO1Q5XXA6 986 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 NUDT18Q6ZVK8 323 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 SAP130Q9H0E3 1048 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 HDAC9Q9UKV0 1011 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 GTF2A1LQ9UNN4 478 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 C3orf80F5H4A9 247 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 ASMTLO95671 621 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 F2P00734 622 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 NBPF1Q3BBV0 1214 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 RNF20Q5VTR2 975 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 POTEHQ6S545 545 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 KIAA0825Q8IV33 1275 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 CELF2-AS1Q8N7Q2 184 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 ANKRD42Q8N9B4 389 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 SNRNP27Q8WVK2 155 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 ASPSCR1Q9BZE9 553 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
ECHDC1-222ENST00000531967 ESPNB1AK53 854 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 CLGNO14967 610 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 CBFA2T2O43439 604 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 FOXO3O43524 673 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 NEK2P51955 445 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 DDX46Q7L014 1031 aaKnown RBP6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 ANAPC16Q96DE5 110 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 FBXO2Q9UK22 296 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 DCAF1Q9Y4B6 1507 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 PDPK1O15530 556 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 RAPGEF3O95398 923 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 RBP3P10745 1247 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 PPM1FP49593 454 aaPredicted RBP6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 GUCY2FP51841 1108 aa6.46□□□□□ -1.38
ECHDC1-222ENST00000531967 DESI1Q6ICB0 168 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms