RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 GMPSP49915 693 aaPredicted RBP24.94■■□□□ 1.58
UBXN1-212ENST00000531625 TCIRG1Q13488 830 aa24.94■■□□□ 1.58
UBXN1-212ENST00000531625 CIAPIN1Q6FI81 312 aa24.94■■□□□ 1.58
UBXN1-212ENST00000531625 PAXIP1Q6ZW49 1069 aaPredicted RBP24.94■■□□□ 1.58
UBXN1-212ENST00000531625 XAGE3Q8WTP9 111 aa24.94■■□□□ 1.58
UBXN1-212ENST00000531625 BEGAINQ9BUH8 593 aa24.94■■□□□ 1.58
UBXN1-212ENST00000531625 MAP2K2P36507 400 aa24.93■■□□□ 1.58
UBXN1-212ENST00000531625 DDX46Q7L014 1031 aaKnown RBP24.93■■□□□ 1.58
UBXN1-212ENST00000531625 ABHD8Q96I13 439 aa24.93■■□□□ 1.58
UBXN1-212ENST00000531625 TRMT112Q9UI30 125 aaKnown RBP24.93■■□□□ 1.58
UBXN1-212ENST00000531625 LAMB2P55268 1798 aa24.93■■□□□ 1.58
UBXN1-212ENST00000531625 SH3TC1Q8TE82 1336 aa24.92■■□□□ 1.58
UBXN1-212ENST00000531625 AIMP1Q12904 312 aaKnown RBP24.92■■□□□ 1.58
UBXN1-212ENST00000531625 GRAPQ13588 217 aa24.92■■□□□ 1.58
UBXN1-212ENST00000531625 TNIP1Q15025 636 aa24.92■■□□□ 1.58
UBXN1-212ENST00000531625 GRAPLQ8TC17 118 aaPredicted RBP24.92■■□□□ 1.58
UBXN1-212ENST00000531625 ZC3H15Q8WU90 426 aaKnown RBP24.92■■□□□ 1.58
UBXN1-212ENST00000531625 TMC4Q7Z404 712 aa24.91■■□□□ 1.58
UBXN1-212ENST00000531625 SAPCD2Q86UD0 394 aa24.91■■□□□ 1.58
UBXN1-212ENST00000531625 HHIPL1Q96JK4 782 aa24.91■■□□□ 1.58
UBXN1-212ENST00000531625 RALBP1Q15311 655 aa24.9■■□□□ 1.58
UBXN1-212ENST00000531625 NECTIN2Q92692 538 aa24.9■■□□□ 1.58
UBXN1-212ENST00000531625 CHL1O00533 1208 aa24.89■■□□□ 1.58
UBXN1-212ENST00000531625 RAD17O75943 681 aa24.89■■□□□ 1.58
UBXN1-212ENST00000531625 CELF2O95319 508 aaKnown RBP24.89■■□□□ 1.58
UBXN1-212ENST00000531625 GRM1Q13255 1194 aa24.89■■□□□ 1.58
UBXN1-212ENST00000531625 BCL2L13Q9BXK5 485 aa24.89■■□□□ 1.58
UBXN1-212ENST00000531625 GLIS2Q9BZE0 524 aaPredicted RBP24.89■■□□□ 1.58
UBXN1-212ENST00000531625 HIRAP54198 1017 aaPredicted RBP24.88■■□□□ 1.57
UBXN1-212ENST00000531625 YDJCA8MPS7 323 aa24.86■■□□□ 1.57
UBXN1-212ENST00000531625 CA12O43570 354 aa24.86■■□□□ 1.57
UBXN1-212ENST00000531625 AOC2O75106 756 aa24.86■■□□□ 1.57
UBXN1-212ENST00000531625 CDC37L1Q7L3B6 337 aa24.86■■□□□ 1.57
UBXN1-212ENST00000531625 CNOT7Q9UIV1 285 aaKnown RBP24.86■■□□□ 1.57
UBXN1-212ENST00000531625 DUOX1Q9NRD9 1551 aa24.85■■□□□ 1.57
UBXN1-212ENST00000531625 TRPM4Q8TD43 1214 aa24.85■■□□□ 1.57
UBXN1-212ENST00000531625 LRRC37AA6NMS7 1700 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 TAF1P21675 1872 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 H7C1D1 291 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 HOXB7P09629 217 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 KRT24Q2M2I5 525 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 PLBD2Q8NHP8 589 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 DPF2Q92785 391 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 CHPF2Q9P2E5 772 aa24.84■■□□□ 1.57
UBXN1-212ENST00000531625 SF3B3Q15393 1217 aaKnown RBP24.83■■□□□ 1.57
UBXN1-212ENST00000531625 ISCA1Q9BUE6 129 aa24.83■■□□□ 1.57
UBXN1-212ENST00000531625 BRPF1P55201 1214 aaPredicted RBP24.82■■□□□ 1.56
UBXN1-212ENST00000531625 ANKRD13DQ6ZTN6 518 aa24.82■■□□□ 1.56
UBXN1-212ENST00000531625 NEUROD2Q15784 382 aa24.81■■□□□ 1.56
UBXN1-212ENST00000531625 WASHC4Q2M389 1173 aa24.81■■□□□ 1.56
UBXN1-212ENST00000531625 HDGFL1Q5TGJ6 251 aa24.81■■□□□ 1.56
UBXN1-212ENST00000531625 MICALL2Q8IY33 904 aa24.81■■□□□ 1.56
UBXN1-212ENST00000531625 TRIM35Q9UPQ4 493 aa24.81■■□□□ 1.56
UBXN1-212ENST00000531625 SHTN1A0MZ66 631 aa24.8■■□□□ 1.56
UBXN1-212ENST00000531625 CELF1Q92879 486 aaKnown RBP24.8■■□□□ 1.56
UBXN1-212ENST00000531625 FAM89AQ96GI7 184 aa24.8■■□□□ 1.56
UBXN1-212ENST00000531625 DBF4Q9UBU7 674 aaPredicted RBP24.8■■□□□ 1.56
UBXN1-212ENST00000531625 DDX60Q8IY21 1712 aaKnown RBP24.8■■□□□ 1.56
UBXN1-212ENST00000531625 TRIM28Q13263 835 aaKnown RBP24.79■■□□□ 1.56
UBXN1-212ENST00000531625 CCDC146Q8IYE0 955 aa24.79■■□□□ 1.56
UBXN1-212ENST00000531625 ZNF408Q9H9D4 720 aa24.79■■□□□ 1.56
UBXN1-212ENST00000531625 TSKSQ9UJT2 592 aa24.79■■□□□ 1.56
UBXN1-212ENST00000531625 NSFL1CQ9UNZ2 370 aaKnown RBP24.79■■□□□ 1.56
UBXN1-212ENST00000531625 PSMD14O00487 310 aa24.78■■□□□ 1.56
UBXN1-212ENST00000531625 USP48Q86UV5 1035 aa24.78■■□□□ 1.56
UBXN1-212ENST00000531625 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
UBXN1-212ENST00000531625 ZBTB12Q9Y330 459 aaPredicted RBP24.78■■□□□ 1.56
UBXN1-212ENST00000531625 LAS1LQ9Y4W2 734 aaKnown RBP24.78■■□□□ 1.56
UBXN1-212ENST00000531625 RPS12P25398 132 aaKnown RBP24.77■■□□□ 1.56
UBXN1-212ENST00000531625 NOGQ13253 232 aa24.77■■□□□ 1.56
UBXN1-212ENST00000531625 ZNF428Q96B54 188 aa24.77■■□□□ 1.56
UBXN1-212ENST00000531625 HYPKQ9NX55 129 aa24.77■■□□□ 1.56
UBXN1-212ENST00000531625 POLLQ9UGP5 575 aa24.77■■□□□ 1.56
UBXN1-212ENST00000531625 ATP5J2-PTCD1G3V325 749 aa24.76■■□□□ 1.55
UBXN1-212ENST00000531625 RGS19P49795 217 aa24.76■■□□□ 1.55
UBXN1-212ENST00000531625 FAM161AQ3B820 660 aa24.76■■□□□ 1.55
UBXN1-212ENST00000531625 DBNDD1Q9H9R9 158 aa24.76■■□□□ 1.55
UBXN1-212ENST00000531625 MYBBP1AQ9BQG0 1328 aaKnown RBP24.76■■□□□ 1.55
UBXN1-212ENST00000531625 CASP8AP2Q9UKL3 1982 aa24.75■■□□□ 1.55
UBXN1-212ENST00000531625 CCDC85CA6NKD9 419 aa24.75■■□□□ 1.55
UBXN1-212ENST00000531625 C6orf229H3BNL8 230 aa24.75■■□□□ 1.55
UBXN1-212ENST00000531625 HUNKP57058 714 aa24.75■■□□□ 1.55
UBXN1-212ENST00000531625 GPSM2P81274 684 aa24.75■■□□□ 1.55
UBXN1-212ENST00000531625 SAMD7Q7Z3H4 446 aa24.75■■□□□ 1.55
UBXN1-212ENST00000531625 EYA3Q99504 573 aa24.75■■□□□ 1.55
UBXN1-212ENST00000531625 CFAP44Q96MT7 982 aa24.74■■□□□ 1.55
UBXN1-212ENST00000531625 IRS4O14654 1257 aaPredicted RBP24.73■■□□□ 1.55
UBXN1-212ENST00000531625 RIMBP2O15034 1052 aa24.73■■□□□ 1.55
UBXN1-212ENST00000531625 ECE2O60344 883 aa24.73■■□□□ 1.55
UBXN1-212ENST00000531625 RPS8P62241 208 aaKnown RBP24.73■■□□□ 1.55
UBXN1-212ENST00000531625 TBC1D10BQ4KMP7 808 aaPredicted RBP24.73■■□□□ 1.55
UBXN1-212ENST00000531625 DUSP27Q5VZP5 1158 aa24.73■■□□□ 1.55
UBXN1-212ENST00000531625 KRT26Q7Z3Y9 468 aa24.73■■□□□ 1.55
UBXN1-212ENST00000531625 POLR2AP24928 1970 aaKnown RBP24.73■■□□□ 1.55
UBXN1-212ENST00000531625 RTL9Q8NET4 1388 aa24.72■■□□□ 1.55
UBXN1-212ENST00000531625 EGFRP00533 1210 aa24.72■■□□□ 1.55
UBXN1-212ENST00000531625 WDR43Q15061 677 aaKnown RBP eCLIP24.72■■□□□ 1.55
UBXN1-212ENST00000531625 TBC1D16Q8TBP0 767 aa24.72■■□□□ 1.55
UBXN1-212ENST00000531625 MLLT1Q03111 559 aaPredicted RBP24.71■■□□□ 1.55
UBXN1-212ENST00000531625 DLK2Q6UY11 383 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms