RNA–Protein interactions for RNA: ENST00000531555.5

TRIM29-217, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-217ENST00000531555 BRIP1Q9BX63 1249 aa10.35□□□□□ -0.75
TRIM29-217ENST00000531555 CHMP3Q9Y3E7 222 aa10.35□□□□□ -0.75
TRIM29-217ENST00000531555 GNAI2P04899 355 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 PDE6BP35913 854 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 LMBR1LQ6UX01 489 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 C2CD5Q86YS7 1000 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 ANKRD44Q8N8A2 993 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 NLGN2Q8NFZ4 835 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 FHDC1Q9C0D6 1143 aaPredicted RBP10.34□□□□□ -0.75
TRIM29-217ENST00000531555 ZBTB40Q9NUA8 1239 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 WWC3Q9ULE0 1092 aa10.34□□□□□ -0.75
TRIM29-217ENST00000531555 A0A0G2JLW4 131 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 DPEP1P16444 411 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 TTLL11Q8NHH1 800 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 GREM2Q9H772 168 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 SEC31BQ9NQW1 1179 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 ARFGEF1Q9Y6D6 1849 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 LRRC37AA6NMS7 1700 aa10.33□□□□□ -0.76
TRIM29-217ENST00000531555 H0YIN7 160 aa10.32□□□□□ -0.76
TRIM29-217ENST00000531555 SRGNP10124 158 aa10.32□□□□□ -0.76
TRIM29-217ENST00000531555 HSP90B1P14625 803 aaKnown RBP10.32□□□□□ -0.76
TRIM29-217ENST00000531555 SF3B3Q15393 1217 aaKnown RBP10.32□□□□□ -0.76
TRIM29-217ENST00000531555 RABL6Q3YEC7 729 aaPredicted RBP10.32□□□□□ -0.76
TRIM29-217ENST00000531555 CRY2Q49AN0 593 aa10.32□□□□□ -0.76
TRIM29-217ENST00000531555 CCDC152Q4G0S7 254 aa10.32□□□□□ -0.76
TRIM29-217ENST00000531555 SLC51AQ86UW1 340 aa10.32□□□□□ -0.76
TRIM29-217ENST00000531555 RPGRQ92834 1020 aaKnown RBP10.32□□□□□ -0.76
TRIM29-217ENST00000531555 ZNF622Q969S3 477 aaKnown RBP eCLIP10.32□□□□□ -0.76
TRIM29-217ENST00000531555 CD2APQ9Y5K6 639 aa10.32□□□□□ -0.76
TRIM29-217ENST00000531555 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
TRIM29-217ENST00000531555 NEFLP07196 543 aa10.31□□□□□ -0.76
TRIM29-217ENST00000531555 CSF1RP07333 972 aa10.31□□□□□ -0.76
TRIM29-217ENST00000531555 CEP85Q6P2H3 762 aa10.31□□□□□ -0.76
TRIM29-217ENST00000531555 ZNF594Q96JF6 807 aaPredicted RBP10.31□□□□□ -0.76
TRIM29-217ENST00000531555 CHMP4BQ9H444 224 aaKnown RBP10.31□□□□□ -0.76
TRIM29-217ENST00000531555 PNMA6EA0A0J9YXQ4 647 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 NPR1P16066 1061 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 KCNA3P22001 575 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 ITGA6P23229 1130 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 TGFB2P61812 414 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 DDX46Q7L014 1031 aaKnown RBP10.3□□□□□ -0.76
TRIM29-217ENST00000531555 KLHDC4Q8TBB5 520 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 CELF1Q92879 486 aaKnown RBP10.3□□□□□ -0.76
TRIM29-217ENST00000531555 MASTLQ96GX5 879 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 RBM17Q96I25 401 aaKnown RBP10.3□□□□□ -0.76
TRIM29-217ENST00000531555 HDAC5Q9UQL6 1122 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
TRIM29-217ENST00000531555 RTL9Q8NET4 1388 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 SRCAPQ6ZRS2 3230 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 ANKRD18BA2A2Z9 1011 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 SRGAP3O43295 1099 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 RFX5P48382 616 aaPredicted RBP10.29□□□□□ -0.76
TRIM29-217ENST00000531555 ATP8B2P98198 1209 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 IFIT5Q13325 482 aaKnown RBP10.29□□□□□ -0.76
TRIM29-217ENST00000531555 CCDC57Q2TAC2 916 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 STYK1Q6J9G0 422 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 SIRT2Q8IXJ6 389 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 SYT17Q9BSW7 474 aa10.29□□□□□ -0.76
TRIM29-217ENST00000531555 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
TRIM29-217ENST00000531555 PA2G4Q9UQ80 394 aaKnown RBP10.29□□□□□ -0.76
TRIM29-217ENST00000531555 FER1L6Q2WGJ9 1857 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 LTBP1Q14766 1721 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 PPEF1O14829 653 aaPredicted RBP10.28□□□□□ -0.76
TRIM29-217ENST00000531555 HOXA10P31260 410 aaPredicted RBP10.28□□□□□ -0.76
TRIM29-217ENST00000531555 MTX1Q13505 466 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 GRAPQ13588 217 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 TAF7LQ5H9L4 462 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 ANKRD18AQ8IVF6 992 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 GRAPLQ8TC17 118 aaPredicted RBP10.28□□□□□ -0.76
TRIM29-217ENST00000531555 CRAMP1Q96RY5 1269 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 SIL1Q9H173 461 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
TRIM29-217ENST00000531555 IGHMBP2P38935 993 aaKnown RBP10.27□□□□□ -0.77
TRIM29-217ENST00000531555 PTPN12Q05209 780 aaKnown RBP10.27□□□□□ -0.77
TRIM29-217ENST00000531555 POLA2Q14181 598 aa10.27□□□□□ -0.77
TRIM29-217ENST00000531555 PRPF40BQ6NWY9 871 aaKnown RBP10.27□□□□□ -0.77
TRIM29-217ENST00000531555 OLFM4Q6UX06 510 aa10.27□□□□□ -0.77
TRIM29-217ENST00000531555 RPAP2Q8IXW5 612 aaPredicted RBP10.27□□□□□ -0.77
TRIM29-217ENST00000531555 SSH3Q8TE77 659 aa10.27□□□□□ -0.77
TRIM29-217ENST00000531555 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
TRIM29-217ENST00000531555 CDC5LQ99459 802 aaKnown RBP10.27□□□□□ -0.77
TRIM29-217ENST00000531555 PUS3Q9BZE2 481 aaKnown RBP10.27□□□□□ -0.77
TRIM29-217ENST00000531555 PIM2Q9P1W9 311 aa10.27□□□□□ -0.77
TRIM29-217ENST00000531555 ALDH1B1P30837 517 aa10.26□□□□□ -0.77
TRIM29-217ENST00000531555 RPS8P62241 208 aaKnown RBP10.26□□□□□ -0.77
TRIM29-217ENST00000531555 LRRC24Q50LG9 513 aa10.26□□□□□ -0.77
TRIM29-217ENST00000531555 DALRD3Q5D0E6 543 aaKnown RBP10.26□□□□□ -0.77
TRIM29-217ENST00000531555 PELP1Q8IZL8 1130 aaKnown RBP10.26□□□□□ -0.77
TRIM29-217ENST00000531555 TTLL6Q8N841 843 aa10.26□□□□□ -0.77
TRIM29-217ENST00000531555 MPHOSPH8Q99549 860 aa10.26□□□□□ -0.77
TRIM29-217ENST00000531555 BCS1LQ9Y276 419 aa10.26□□□□□ -0.77
TRIM29-217ENST00000531555 GOLGB1Q14789 3259 aaKnown RBP10.25□□□□□ -0.77
TRIM29-217ENST00000531555 ARAP2Q8WZ64 1704 aa10.25□□□□□ -0.77
TRIM29-217ENST00000531555 DCAF8L1A6NGE4 600 aa10.25□□□□□ -0.77
TRIM29-217ENST00000531555 C21orf2O43822 256 aa10.25□□□□□ -0.77
TRIM29-217ENST00000531555 LDHAL6AQ6ZMR3 332 aa10.25□□□□□ -0.77
TRIM29-217ENST00000531555 CNNM1Q9NRU3 951 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms