RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 USP17L18D6R9N7 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L22D6RA61 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L17D6RBQ6 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L19D6RCP7 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L20D6RJB6 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 TARSP26639 723 aaKnown RBP10.5□□□□□ -0.73
PTPRK-220ENST00000531466 USP17L24Q0WX57 530 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 PCSK7Q16549 785 aa10.5□□□□□ -0.73
PTPRK-220ENST00000531466 KANK4Q5T7N3 995 aaPredicted RBP10.5□□□□□ -0.73
PTPRK-220ENST00000531466 DHX32Q7L7V1 743 aaKnown RBP10.5□□□□□ -0.73
PTPRK-220ENST00000531466 SASH3O75995 380 aa10.49□□□□□ -0.73
PTPRK-220ENST00000531466 LRP8Q14114 963 aa10.49□□□□□ -0.73
PTPRK-220ENST00000531466 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
PTPRK-220ENST00000531466 FBXO11Q86XK2 927 aa10.49□□□□□ -0.73
PTPRK-220ENST00000531466 ANKMY2Q8IV38 441 aa10.49□□□□□ -0.73
PTPRK-220ENST00000531466 IFT43Q96FT9 208 aa10.49□□□□□ -0.73
PTPRK-220ENST00000531466 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
PTPRK-220ENST00000531466 RARAP10276 462 aa10.48□□□□□ -0.73
PTPRK-220ENST00000531466 ARSDP51689 593 aa10.48□□□□□ -0.73
PTPRK-220ENST00000531466 WFDC8Q8IUA0 241 aa10.48□□□□□ -0.73
PTPRK-220ENST00000531466 TRPM4Q8TD43 1214 aa10.48□□□□□ -0.73
PTPRK-220ENST00000531466 WFDC12Q8WWY7 111 aa10.48□□□□□ -0.73
PTPRK-220ENST00000531466 QTRT2Q9H974 415 aaKnown RBP10.48□□□□□ -0.73
PTPRK-220ENST00000531466 FRRS1LQ9P0K9 344 aa10.48□□□□□ -0.73
PTPRK-220ENST00000531466 IREB2P48200 963 aaKnown RBP10.47□□□□□ -0.73
PTPRK-220ENST00000531466 HFE2Q6ZVN8 426 aa10.47□□□□□ -0.73
PTPRK-220ENST00000531466 DTWD1Q8N5C7 304 aa10.47□□□□□ -0.73
PTPRK-220ENST00000531466 CALR3Q96L12 384 aaKnown RBP10.47□□□□□ -0.73
PTPRK-220ENST00000531466 MICAL2O94851 1124 aa10.46□□□□□ -0.73
PTPRK-220ENST00000531466 NOS3P29474 1203 aa10.46□□□□□ -0.73
PTPRK-220ENST00000531466 USP20Q9Y2K6 914 aa10.46□□□□□ -0.73
PTPRK-220ENST00000531466 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
PTPRK-220ENST00000531466 HYAL3O43820 417 aaPredicted RBP10.45□□□□□ -0.74
PTPRK-220ENST00000531466 GPLD1P80108 840 aa10.45□□□□□ -0.74
PTPRK-220ENST00000531466 VTI1AQ96AJ9 217 aa10.45□□□□□ -0.74
PTPRK-220ENST00000531466 SMG9Q9H0W8 520 aaKnown RBP10.45□□□□□ -0.74
PTPRK-220ENST00000531466 LMOD1P29536 600 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-220ENST00000531466 VRTNQ9H8Y1 702 aa10.44□□□□□ -0.74
PTPRK-220ENST00000531466 DEAF1O75398 565 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-220ENST00000531466 EIF2AK2P19525 551 aaKnown RBP10.43□□□□□ -0.74
PTPRK-220ENST00000531466 WEE1P30291 646 aa10.43□□□□□ -0.74
PTPRK-220ENST00000531466 ARXQ96QS3 562 aa10.43□□□□□ -0.74
PTPRK-220ENST00000531466 C11orf91Q3C1V1 193 aa10.42□□□□□ -0.74
PTPRK-220ENST00000531466 MEGF10Q96KG7 1140 aa10.42□□□□□ -0.74
PTPRK-220ENST00000531466 OPLAHO14841 1288 aa10.41□□□□□ -0.74
PTPRK-220ENST00000531466 FOXO3O43524 673 aa10.41□□□□□ -0.74
PTPRK-220ENST00000531466 IGF2-ASQ6U949 168 aa10.41□□□□□ -0.74
PTPRK-220ENST00000531466 TTC9Q92623 222 aa10.41□□□□□ -0.74
PTPRK-220ENST00000531466 RTCBQ9Y3I0 505 aaKnown RBP10.41□□□□□ -0.74
PTPRK-220ENST00000531466 NRLP54845 237 aa10.4□□□□□ -0.74
PTPRK-220ENST00000531466 MYO19Q96H55 970 aa10.4□□□□□ -0.74
PTPRK-220ENST00000531466 C11orf16Q9NQ32 467 aa10.4□□□□□ -0.74
PTPRK-220ENST00000531466 TLR7Q9NYK1 1049 aaKnown RBP10.4□□□□□ -0.74
PTPRK-220ENST00000531466 LRFN2Q9ULH4 789 aa10.4□□□□□ -0.74
PTPRK-220ENST00000531466 ARID4AP29374 1257 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-220ENST00000531466 RGL4Q8IZJ4 473 aa10.39□□□□□ -0.75
PTPRK-220ENST00000531466 J3QW42 95 aa10.38□□□□□ -0.75
PTPRK-220ENST00000531466 DLL1O00548 723 aa10.38□□□□□ -0.75
PTPRK-220ENST00000531466 XYLBO75191 536 aa10.38□□□□□ -0.75
PTPRK-220ENST00000531466 CMTR1Q8N1G2 835 aaKnown RBP10.38□□□□□ -0.75
PTPRK-220ENST00000531466 GDF6Q6KF10 455 aaPredicted RBP10.37□□□□□ -0.75
PTPRK-220ENST00000531466 TREML1Q86YW5 311 aa10.37□□□□□ -0.75
PTPRK-220ENST00000531466 PLD4Q96BZ4 506 aa10.37□□□□□ -0.75
PTPRK-220ENST00000531466 NSUN5Q96P11 429 aaKnown RBP10.37□□□□□ -0.75
PTPRK-220ENST00000531466 ALX3O95076 343 aa10.36□□□□□ -0.75
PTPRK-220ENST00000531466 PRR23CQ6ZRP0 262 aa10.36□□□□□ -0.75
PTPRK-220ENST00000531466 AKTIPQ9H8T0 292 aa10.36□□□□□ -0.75
PTPRK-220ENST00000531466 LOC102724428A0A0B4J2F2 783 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 MMP20O60882 483 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 EGFRP00533 1210 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 PSAPP07602 524 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 SIK1P57059 783 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 CDCA8Q53HL2 280 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 RNF112Q9ULX5 631 aa10.35□□□□□ -0.75
PTPRK-220ENST00000531466 IL22RA1Q8N6P7 574 aa10.34□□□□□ -0.75
PTPRK-220ENST00000531466 GHRHP01286 108 aa10.33□□□□□ -0.76
PTPRK-220ENST00000531466 COX20Q5RI15 118 aa10.33□□□□□ -0.76
PTPRK-220ENST00000531466 KRTAP1-3Q8IUG1 177 aa10.33□□□□□ -0.76
PTPRK-220ENST00000531466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.33□□□□□ -0.76
PTPRK-220ENST00000531466 KCNMB2Q9Y691 235 aa10.33□□□□□ -0.76
PTPRK-220ENST00000531466 A6NJR5 290 aa10.32□□□□□ -0.76
PTPRK-220ENST00000531466 FKBP5Q13451 457 aaPredicted RBP10.32□□□□□ -0.76
PTPRK-220ENST00000531466 CFAP70Q5T0N1 1121 aa10.32□□□□□ -0.76
PTPRK-220ENST00000531466 DZIP1LQ8IYY4 767 aaKnown RBP10.32□□□□□ -0.76
PTPRK-220ENST00000531466 MRPL18Q9H0U6 180 aaKnown RBP10.32□□□□□ -0.76
PTPRK-220ENST00000531466 F8W735 103 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-220ENST00000531466 PRIMPOLQ96LW4 560 aa10.31□□□□□ -0.76
PTPRK-220ENST00000531466 FSTP19883 344 aa10.3□□□□□ -0.76
PTPRK-220ENST00000531466 KRTAP4-12Q9BQ66 201 aa10.3□□□□□ -0.76
PTPRK-220ENST00000531466 TRIM33Q9UPN9 1127 aa10.3□□□□□ -0.76
PTPRK-220ENST00000531466 RFX1P22670 979 aa10.29□□□□□ -0.76
PTPRK-220ENST00000531466 SETDB1Q15047 1291 aa10.29□□□□□ -0.76
PTPRK-220ENST00000531466 ETFBKMTQ8IXQ9 262 aa10.29□□□□□ -0.76
PTPRK-220ENST00000531466 AGGF1Q8N302 714 aaeCLIP10.29□□□□□ -0.76
PTPRK-220ENST00000531466 RBSNQ9H1K0 784 aa10.29□□□□□ -0.76
PTPRK-220ENST00000531466 NOVA2Q9UNW9 492 aaKnown RBP10.29□□□□□ -0.76
PTPRK-220ENST00000531466 TRIP4Q15650 581 aaPredicted RBP10.28□□□□□ -0.76
PTPRK-220ENST00000531466 TMEM130Q8N3G9 435 aa10.28□□□□□ -0.76
PTPRK-220ENST00000531466 PCMTD2Q9NV79 361 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms