RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 HMG20BQ9P0W2 317 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 RBM8AQ9Y5S9 174 aaKnown RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 CYP46A1Q9Y6A2 500 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 LRP6O75581 1613 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 CASTP20810 708 aaKnown RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 PSMA5P28066 241 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 PTH1RQ03431 593 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 NMIQ13287 307 aaPredicted RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 TNNI3KQ59H18 835 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 SYAP1Q96A49 352 aaPredicted RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 CCDC8Q9H0W5 538 aaPredicted RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 GPR108Q9NPR9 543 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 PRDM11Q9NQV5 511 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
IFT46-208ENST00000531201 FPGT-TNNI3KV9GXZ4 949 aa11.32□□□□□ -0.6
IFT46-208ENST00000531201 H7C1W4 665 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 TSGA10IPQ3SY00 556 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 CREB3L3Q68CJ9 461 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 PRPF40BQ6NWY9 871 aaKnown RBP11.31□□□□□ -0.6
IFT46-208ENST00000531201 UBE3BQ7Z3V4 1068 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 JAKMIP1Q96N16 626 aaKnown RBP11.31□□□□□ -0.6
IFT46-208ENST00000531201 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 SIL1Q9H173 461 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
IFT46-208ENST00000531201 PDRG1Q9NUG6 133 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 ATP6V1DQ9Y5K8 247 aa11.31□□□□□ -0.6
IFT46-208ENST00000531201 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.31□□□□□ -0.6
IFT46-208ENST00000531201 PALLDQ8WX93 1383 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 A0A087WZG4 1122 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 PHF14O94880 888 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 ZSCAN22P10073 491 aaPredicted RBP11.3□□□□□ -0.6
IFT46-208ENST00000531201 IL2RBP14784 551 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 CLCN1P35523 988 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 LRSAM1Q6UWE0 723 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
IFT46-208ENST00000531201 FAM227BQ96M60 508 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 DBNLQ9UJU6 430 aaKnown RBP11.3□□□□□ -0.6
IFT46-208ENST00000531201 SMC3Q9UQE7 1217 aa11.3□□□□□ -0.6
IFT46-208ENST00000531201 WNK3Q9BYP7 1800 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 A0A0D9SFI3 127 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 SLC27A2O14975 620 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 NCLP19338 710 aaKnown RBP11.29□□□□□ -0.6
IFT46-208ENST00000531201 KRT32Q14532 448 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 USPL1Q5W0Q7 1092 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
IFT46-208ENST00000531201 TOM1L2Q6ZVM7 507 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 NBPF15Q8N660 670 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 CCDC191Q8NCU4 936 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
IFT46-208ENST00000531201 BOLA2Q9H3K6 86 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 ATG3Q9NT62 314 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 CWC25Q9NXE8 425 aaPredicted RBP11.29□□□□□ -0.6
IFT46-208ENST00000531201 TMEM63CQ9P1W3 806 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 ANKRD36CQ5JPF3 1778 aa11.29□□□□□ -0.6
IFT46-208ENST00000531201 ZNF609O15014 1411 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 COL14A1Q05707 1796 aaKnown RBP11.28□□□□□ -0.6
IFT46-208ENST00000531201 STX6O43752 255 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 KCNJ4P48050 445 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 FOXO4P98177 505 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 TFCP2Q12800 502 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 CSPP1Q1MSJ5 1256 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 ADCK5Q3MIX3 580 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 HAUS7Q99871 368 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 SH3TC1Q8TE82 1336 aa11.28□□□□□ -0.6
IFT46-208ENST00000531201 ESPNB1AK53 854 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 CIAO1O76071 339 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 F13A1P00488 732 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 SYT1P21579 422 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 HS1BP3Q53T59 392 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 BLOC1S2Q6QNY1 142 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.6
IFT46-208ENST00000531201 KLHDC4Q8TBB5 520 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 PHF12Q96QT6 1004 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 FBXO3Q9UK99 471 aa11.27□□□□□ -0.6
IFT46-208ENST00000531201 ITGB4P16144 1822 aa11.27□□□□□ -0.61
IFT46-208ENST00000531201 TCHHQ07283 1943 aa11.27□□□□□ -0.61
IFT46-208ENST00000531201 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.61
IFT46-208ENST00000531201 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.26□□□□□ -0.61
IFT46-208ENST00000531201 ATP5J2-PTCD1G3V325 749 aa11.26□□□□□ -0.61
IFT46-208ENST00000531201 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
IFT46-208ENST00000531201 TAF5LO75529 589 aa11.26□□□□□ -0.61
IFT46-208ENST00000531201 LARGE1O95461 756 aa11.26□□□□□ -0.61
IFT46-208ENST00000531201 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
IFT46-208ENST00000531201 IL15P40933 162 aaPredicted RBP11.26□□□□□ -0.61
IFT46-208ENST00000531201 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
IFT46-208ENST00000531201 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.26□□□□□ -0.61
IFT46-208ENST00000531201 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
IFT46-208ENST00000531201 PDLIM2Q96JY6 352 aa11.26□□□□□ -0.61
IFT46-208ENST00000531201 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
IFT46-208ENST00000531201 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
IFT46-208ENST00000531201 LETM1O95202 739 aaPredicted RBP11.25□□□□□ -0.61
IFT46-208ENST00000531201 PDCP20941 246 aa11.25□□□□□ -0.61
IFT46-208ENST00000531201 GJB2P29033 226 aa11.25□□□□□ -0.61
IFT46-208ENST00000531201 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
IFT46-208ENST00000531201 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms