RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 YDJCA8MPS7 323 aa17.46■□□□□ 0.39
HIF3A-214ENST00000531043 TCIRG1Q13488 830 aa17.46■□□□□ 0.39
HIF3A-214ENST00000531043 DPP8Q6V1X1 898 aaPredicted RBP17.46■□□□□ 0.39
HIF3A-214ENST00000531043 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
HIF3A-214ENST00000531043 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
HIF3A-214ENST00000531043 TRPM4Q8TD43 1214 aa17.46■□□□□ 0.39
HIF3A-214ENST00000531043 TLL2Q9Y6L7 1015 aa17.46■□□□□ 0.39
HIF3A-214ENST00000531043 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
HIF3A-214ENST00000531043 DDX60Q8IY21 1712 aaKnown RBP17.45■□□□□ 0.38
HIF3A-214ENST00000531043 BBOX1O75936 387 aa17.45■□□□□ 0.38
HIF3A-214ENST00000531043 KIAA2012Q0VF49 1180 aa17.45■□□□□ 0.38
HIF3A-214ENST00000531043 MPNDQ8N594 471 aa17.45■□□□□ 0.38
HIF3A-214ENST00000531043 ABHD8Q96I13 439 aa17.45■□□□□ 0.38
HIF3A-214ENST00000531043 GPR101Q96P66 508 aaPredicted RBP17.45■□□□□ 0.38
HIF3A-214ENST00000531043 CELF2O95319 508 aaKnown RBP17.44■□□□□ 0.38
HIF3A-214ENST00000531043 GRAPQ13588 217 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 CIAPIN1Q6FI81 312 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 DLK2Q6UY11 383 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 SUPT20HQ8NEM7 779 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 GRAPLQ8TC17 118 aaPredicted RBP17.44■□□□□ 0.38
HIF3A-214ENST00000531043 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 CHPF2Q9P2E5 772 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 TRMT112Q9UI30 125 aaKnown RBP17.44■□□□□ 0.38
HIF3A-214ENST00000531043 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
HIF3A-214ENST00000531043 ECE1P42892 770 aa17.43■□□□□ 0.38
HIF3A-214ENST00000531043 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
HIF3A-214ENST00000531043 BABAM1Q9NWV8 329 aa17.43■□□□□ 0.38
HIF3A-214ENST00000531043 CHL1O00533 1208 aa17.42■□□□□ 0.38
HIF3A-214ENST00000531043 HSP90AB3PQ58FF7 597 aa17.42■□□□□ 0.38
HIF3A-214ENST00000531043 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
HIF3A-214ENST00000531043 SAPCD2Q86UD0 394 aa17.42■□□□□ 0.38
HIF3A-214ENST00000531043 PGAP2Q9UHJ9 254 aa17.42■□□□□ 0.38
HIF3A-214ENST00000531043 TRIM35Q9UPQ4 493 aa17.42■□□□□ 0.38
HIF3A-214ENST00000531043 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
HIF3A-214ENST00000531043 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
HIF3A-214ENST00000531043 LRRC37AA6NMS7 1700 aa17.41■□□□□ 0.38
HIF3A-214ENST00000531043 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
HIF3A-214ENST00000531043 BCL2L13Q9BXK5 485 aa17.41■□□□□ 0.38
HIF3A-214ENST00000531043 ZNF408Q9H9D4 720 aa17.41■□□□□ 0.38
HIF3A-214ENST00000531043 CNOT7Q9UIV1 285 aaKnown RBP17.41■□□□□ 0.38
HIF3A-214ENST00000531043 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
HIF3A-214ENST00000531043 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
HIF3A-214ENST00000531043 ZIC5Q96T25 663 aa17.4■□□□□ 0.38
HIF3A-214ENST00000531043 EGFRP00533 1210 aa17.39■□□□□ 0.37
HIF3A-214ENST00000531043 LMOD3Q0VAK6 560 aa17.39■□□□□ 0.37
HIF3A-214ENST00000531043 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
HIF3A-214ENST00000531043 MICALL2Q8IY33 904 aa17.39■□□□□ 0.37
HIF3A-214ENST00000531043 ISCA1Q9BUE6 129 aa17.39■□□□□ 0.37
HIF3A-214ENST00000531043 KCNQ5Q9NR82 932 aa17.39■□□□□ 0.37
HIF3A-214ENST00000531043 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
HIF3A-214ENST00000531043 PSMD14O00487 310 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 RIMBP2O15034 1052 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 GPSM2P81274 684 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 TNIP1Q15025 636 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 RALBP1Q15311 655 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 FAM161AQ3B820 660 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 SAMD7Q7Z3H4 446 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 PLBD2Q8NHP8 589 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 BEGAINQ9BUH8 593 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 DBNDD1Q9H9R9 158 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
HIF3A-214ENST00000531043 MAP2K2P36507 400 aa17.37■□□□□ 0.37
HIF3A-214ENST00000531043 HDGFL1Q5TGJ6 251 aa17.37■□□□□ 0.37
HIF3A-214ENST00000531043 CDHR2Q9BYE9 1310 aa17.37■□□□□ 0.37
HIF3A-214ENST00000531043 CCDC85CA6NKD9 419 aa17.36■□□□□ 0.37
HIF3A-214ENST00000531043 SF3B3Q15393 1217 aaKnown RBP17.36■□□□□ 0.37
HIF3A-214ENST00000531043 ANKRD13DQ6ZTN6 518 aa17.36■□□□□ 0.37
HIF3A-214ENST00000531043 ZC3H15Q8WU90 426 aaKnown RBP17.36■□□□□ 0.37
HIF3A-214ENST00000531043 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
HIF3A-214ENST00000531043 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
HIF3A-214ENST00000531043 WASHC4Q2M389 1173 aa17.35■□□□□ 0.37
HIF3A-214ENST00000531043 TBC1D10BQ4KMP7 808 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-214ENST00000531043 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
HIF3A-214ENST00000531043 RTL9Q8NET4 1388 aa17.35■□□□□ 0.37
HIF3A-214ENST00000531043 C6orf229H3BNL8 230 aa17.34■□□□□ 0.37
HIF3A-214ENST00000531043 H7C1D1 291 aa17.34■□□□□ 0.37
HIF3A-214ENST00000531043 DDX10Q13206 875 aaKnown RBP17.34■□□□□ 0.37
HIF3A-214ENST00000531043 DUSP27Q5VZP5 1158 aa17.34■□□□□ 0.37
HIF3A-214ENST00000531043 TMC4Q7Z404 712 aa17.34■□□□□ 0.37
HIF3A-214ENST00000531043 RUNDC1Q96C34 613 aa17.34■□□□□ 0.37
HIF3A-214ENST00000531043 HHIPL1Q96JK4 782 aa17.34■□□□□ 0.37
HIF3A-214ENST00000531043 ADAMTS8Q9UP79 889 aa17.34■□□□□ 0.37
HIF3A-214ENST00000531043 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.36
HIF3A-214ENST00000531043 MYBBP1AQ9BQG0 1328 aaKnown RBP17.33■□□□□ 0.36
HIF3A-214ENST00000531043 ADM5C9JUS6 153 aa17.33■□□□□ 0.36
HIF3A-214ENST00000531043 ECE2O60344 883 aa17.33■□□□□ 0.36
HIF3A-214ENST00000531043 RBM26Q5T8P6 1007 aaKnown RBP17.33■□□□□ 0.36
HIF3A-214ENST00000531043 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.36
HIF3A-214ENST00000531043 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-214ENST00000531043 BRPF1P55201 1214 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-214ENST00000531043 HUNKP57058 714 aa17.32■□□□□ 0.36
HIF3A-214ENST00000531043 KRT26Q7Z3Y9 468 aa17.32■□□□□ 0.36
HIF3A-214ENST00000531043 TBC1D16Q8TBP0 767 aa17.32■□□□□ 0.36
HIF3A-214ENST00000531043 DPF2Q92785 391 aa17.32■□□□□ 0.36
HIF3A-214ENST00000531043 JARID2Q92833 1246 aaPredicted RBP17.32■□□□□ 0.36
HIF3A-214ENST00000531043 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
HIF3A-214ENST00000531043 SEC31BQ9NQW1 1179 aa17.32■□□□□ 0.36
HIF3A-214ENST00000531043 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms