RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 CCDC93Q567U6 631 aa15.07■□□□□ 0
LTBP3-219ENST00000530990 SOGA3Q5TF21 947 aa15.07■□□□□ 0
LTBP3-219ENST00000530990 DDX46Q7L014 1031 aaKnown RBP15.07■□□□□ 0
LTBP3-219ENST00000530990 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
LTBP3-219ENST00000530990 NOB1Q9ULX3 412 aaKnown RBP15.07■□□□□ 0
LTBP3-219ENST00000530990 KIF16BQ96L93 1317 aa15.07■□□□□ 0
LTBP3-219ENST00000530990 LTBP1Q14766 1721 aa15.06■□□□□ 0
LTBP3-219ENST00000530990 BCAR3O75815 825 aa15.06■□□□□ 0
LTBP3-219ENST00000530990 ALDH1L1O75891 902 aa15.06■□□□□ 0
LTBP3-219ENST00000530990 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
LTBP3-219ENST00000530990 PRELPP51888 382 aa15.06■□□□□ 0
LTBP3-219ENST00000530990 CTSWP56202 376 aa15.06■□□□□ 0
LTBP3-219ENST00000530990 GRAPQ13588 217 aa15.06■□□□□ 0
LTBP3-219ENST00000530990 GRAPLQ8TC17 118 aaPredicted RBP15.06■□□□□ 0
LTBP3-219ENST00000530990 CCDC85AQ96PX6 553 aaPredicted RBP15.06■□□□□ 0
LTBP3-219ENST00000530990 CELF1Q92879 486 aaKnown RBP15.05■□□□□ -0
LTBP3-219ENST00000530990 TAOK3Q9H2K8 898 aa15.05■□□□□ -0
LTBP3-219ENST00000530990 LTBP3Q9NS15 1303 aa15.05■□□□□ -0
LTBP3-219ENST00000530990 DUOX1Q9NRD9 1551 aa15.05■□□□□ -0
LTBP3-219ENST00000530990 A0A1B0GUL6 1792 aa15.04■□□□□ -0
LTBP3-219ENST00000530990 GRM8O00222 908 aa15.04■□□□□ -0
LTBP3-219ENST00000530990 CCDC152Q4G0S7 254 aa15.04■□□□□ -0
LTBP3-219ENST00000530990 C9orf131Q5VYM1 1079 aa15.04■□□□□ -0
LTBP3-219ENST00000530990 PLA2G12BQ9BX93 195 aa15.04■□□□□ -0
LTBP3-219ENST00000530990 SEC31BQ9NQW1 1179 aa15.04■□□□□ -0
LTBP3-219ENST00000530990 RNF181Q9P0P0 153 aa15.04■□□□□ -0
LTBP3-219ENST00000530990 LMNB1P20700 586 aa15.03■□□□□ -0
LTBP3-219ENST00000530990 TTLL11Q8NHH1 800 aa15.03■□□□□ -0
LTBP3-219ENST00000530990 API5Q9BZZ5 524 aaKnown RBP15.03■□□□□ -0
LTBP3-219ENST00000530990 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
LTBP3-219ENST00000530990 RTL9Q8NET4 1388 aa15.02■□□□□ -0
LTBP3-219ENST00000530990 BBOX1O75936 387 aa15.02■□□□□ -0
LTBP3-219ENST00000530990 FKBP4Q02790 459 aaKnown RBP eCLIP15.02■□□□□ -0
LTBP3-219ENST00000530990 RTKN2Q8IZC4 609 aa15.02■□□□□ -0
LTBP3-219ENST00000530990 FRAT1Q92837 279 aaPredicted RBP15.02■□□□□ -0
LTBP3-219ENST00000530990 YTHDC1Q96MU7 727 aaKnown RBP15.02■□□□□ -0
LTBP3-219ENST00000530990 GREM2Q9H772 168 aa15.02■□□□□ -0
LTBP3-219ENST00000530990 C9orf78Q9NZ63 289 aaPredicted RBP15.02■□□□□ -0
LTBP3-219ENST00000530990 TNNQ9UQP3 1299 aa15.02■□□□□ -0
LTBP3-219ENST00000530990 COL4A5P29400 1685 aa15.02□□□□□ -0.01
LTBP3-219ENST00000530990 UTYO14607 1347 aa15.01□□□□□ -0.01
LTBP3-219ENST00000530990 NBPF7P0C2Y1 421 aaPredicted RBP15.01□□□□□ -0.01
LTBP3-219ENST00000530990 TRIM27P14373 513 aa15.01□□□□□ -0.01
LTBP3-219ENST00000530990 C1QTNF8P60827 252 aa15.01□□□□□ -0.01
LTBP3-219ENST00000530990 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
LTBP3-219ENST00000530990 CC2D2BQ6DHV5 1058 aa15.01□□□□□ -0.01
LTBP3-219ENST00000530990 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
LTBP3-219ENST00000530990 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
LTBP3-219ENST00000530990 FOXO4P98177 505 aa15□□□□□ -0.01
LTBP3-219ENST00000530990 EPHA10Q5JZY3 1008 aa15□□□□□ -0.01
LTBP3-219ENST00000530990 TMC4Q7Z404 712 aa15□□□□□ -0.01
LTBP3-219ENST00000530990 SP8Q8IXZ3 490 aa15□□□□□ -0.01
LTBP3-219ENST00000530990 SUCLG2Q96I99 432 aa15□□□□□ -0.01
LTBP3-219ENST00000530990 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
LTBP3-219ENST00000530990 CSF1RP07333 972 aa14.99□□□□□ -0.01
LTBP3-219ENST00000530990 RPS8P62241 208 aaKnown RBP14.99□□□□□ -0.01
LTBP3-219ENST00000530990 ATF7IPQ6VMQ6 1270 aa14.99□□□□□ -0.01
LTBP3-219ENST00000530990 KAZALD1Q96I82 304 aa14.99□□□□□ -0.01
LTBP3-219ENST00000530990 PSMD1Q99460 953 aa14.99□□□□□ -0.01
LTBP3-219ENST00000530990 IPO8O15397 1037 aaKnown RBP14.98□□□□□ -0.01
LTBP3-219ENST00000530990 ITGA6P23229 1130 aa14.98□□□□□ -0.01
LTBP3-219ENST00000530990 GRIPAP1Q4V328 841 aa14.98□□□□□ -0.01
LTBP3-219ENST00000530990 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
LTBP3-219ENST00000530990 ANKRD18AQ8IVF6 992 aa14.98□□□□□ -0.01
LTBP3-219ENST00000530990 CDC5LQ99459 802 aaKnown RBP14.98□□□□□ -0.01
LTBP3-219ENST00000530990 USP44Q9H0E7 712 aa14.98□□□□□ -0.01
LTBP3-219ENST00000530990 TMX4Q9H1E5 349 aaPredicted RBP14.98□□□□□ -0.01
LTBP3-219ENST00000530990 ZC3H4Q9UPT8 1303 aaKnown RBP14.97□□□□□ -0.01
LTBP3-219ENST00000530990 IARSP41252 1262 aaKnown RBP14.97□□□□□ -0.01
LTBP3-219ENST00000530990 LMBR1LQ6UX01 489 aa14.97□□□□□ -0.01
LTBP3-219ENST00000530990 DPP8Q6V1X1 898 aaPredicted RBP14.97□□□□□ -0.01
LTBP3-219ENST00000530990 MPNDQ8N594 471 aa14.97□□□□□ -0.01
LTBP3-219ENST00000530990 ZNF526Q8TF50 670 aaPredicted RBP14.97□□□□□ -0.01
LTBP3-219ENST00000530990 CLUAP1Q96AJ1 413 aa14.97□□□□□ -0.01
LTBP3-219ENST00000530990 CHMP3Q9Y3E7 222 aa14.97□□□□□ -0.01
LTBP3-219ENST00000530990 GPSM2P81274 684 aa14.96□□□□□ -0.01
LTBP3-219ENST00000530990 INTS3Q68E01 1043 aaKnown RBP14.96□□□□□ -0.01
LTBP3-219ENST00000530990 RTFDC1Q9BY42 306 aaPredicted RBP14.96□□□□□ -0.01
LTBP3-219ENST00000530990 BICC1Q9H694 974 aaKnown RBP14.96□□□□□ -0.01
LTBP3-219ENST00000530990 ANKRD18BA2A2Z9 1011 aa14.95□□□□□ -0.02
LTBP3-219ENST00000530990 ANKRD44Q8N8A2 993 aa14.95□□□□□ -0.02
LTBP3-219ENST00000530990 NSFL1CQ9UNZ2 370 aaKnown RBP14.95□□□□□ -0.02
LTBP3-219ENST00000530990 WDR90Q96KV7 1748 aa14.95□□□□□ -0.02
LTBP3-219ENST00000530990 PPIP5K2O43314 1243 aa14.94□□□□□ -0.02
LTBP3-219ENST00000530990 UBTFL1P0CB47 393 aaPredicted RBP14.94□□□□□ -0.02
LTBP3-219ENST00000530990 IGHMBP2P38935 993 aaKnown RBP14.94□□□□□ -0.02
LTBP3-219ENST00000530990 IFIT5Q13325 482 aaKnown RBP14.94□□□□□ -0.02
LTBP3-219ENST00000530990 AOC3Q16853 763 aa14.94□□□□□ -0.02
LTBP3-219ENST00000530990 RABL6Q3YEC7 729 aaPredicted RBP14.94□□□□□ -0.02
LTBP3-219ENST00000530990 SUPT20HQ8NEM7 779 aa14.94□□□□□ -0.02
LTBP3-219ENST00000530990 MEIS3Q99687 375 aa14.94□□□□□ -0.02
LTBP3-219ENST00000530990 GPBP1L1Q9HC44 474 aaPredicted RBP14.94□□□□□ -0.02
LTBP3-219ENST00000530990 BSDC1Q9NW68 430 aaPredicted RBP14.94□□□□□ -0.02
LTBP3-219ENST00000530990 RCAN3Q9UKA8 241 aa14.94□□□□□ -0.02
LTBP3-219ENST00000530990 RLBP1P12271 317 aa14.93□□□□□ -0.02
LTBP3-219ENST00000530990 LARGE2Q8N3Y3 721 aa14.93□□□□□ -0.02
LTBP3-219ENST00000530990 TMEM57Q8N5G2 664 aa14.93□□□□□ -0.02
LTBP3-219ENST00000530990 PODXL2Q9NZ53 605 aa14.93□□□□□ -0.02
LTBP3-219ENST00000530990 POLLQ9UGP5 575 aa14.93□□□□□ -0.02
LTBP3-219ENST00000530990 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms