RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 WDR33Q9C0J8 1336 aaKnown RBP22.78■■□□□ 1.24
LTBP3-217ENST00000530785 FUCA2Q9BTY2 467 aa22.78■■□□□ 1.24
LTBP3-217ENST00000530785 ECHDC1Q9NTX5 307 aa22.78■■□□□ 1.24
LTBP3-217ENST00000530785 RPAP1Q9BWH6 1393 aaPredicted RBP22.78■■□□□ 1.24
LTBP3-217ENST00000530785 SLFN14P0C7P3 912 aa22.77■■□□□ 1.24
LTBP3-217ENST00000530785 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
LTBP3-217ENST00000530785 MYD88Q99836 296 aa22.77■■□□□ 1.24
LTBP3-217ENST00000530785 METTL22Q9BUU2 404 aaPredicted RBP22.77■■□□□ 1.24
LTBP3-217ENST00000530785 UPF3BQ9BZI7 483 aaKnown RBP22.77■■□□□ 1.24
LTBP3-217ENST00000530785 ROBO1Q9Y6N7 1651 aa22.77■■□□□ 1.24
LTBP3-217ENST00000530785 IFIT2P09913 472 aaKnown RBP22.77■■□□□ 1.24
LTBP3-217ENST00000530785 GCKRQ14397 625 aa22.77■■□□□ 1.24
LTBP3-217ENST00000530785 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.77■■□□□ 1.24
LTBP3-217ENST00000530785 AP5Z1O43299 807 aa22.76■■□□□ 1.23
LTBP3-217ENST00000530785 CABP4P57796 275 aa22.76■■□□□ 1.23
LTBP3-217ENST00000530785 PIP4K2BP78356 416 aa22.76■■□□□ 1.23
LTBP3-217ENST00000530785 AACSQ86V21 672 aa22.76■■□□□ 1.23
LTBP3-217ENST00000530785 DDX41Q9UJV9 622 aaKnown RBP22.76■■□□□ 1.23
LTBP3-217ENST00000530785 SASH1O94885 1247 aa22.76■■□□□ 1.23
LTBP3-217ENST00000530785 IPO4Q8TEX9 1081 aaKnown RBP22.76■■□□□ 1.23
LTBP3-217ENST00000530785 CWC27Q6UX04 472 aaKnown RBP22.75■■□□□ 1.23
LTBP3-217ENST00000530785 NOL8Q76FK4 1167 aaKnown RBP22.75■■□□□ 1.23
LTBP3-217ENST00000530785 LSG1Q9H089 658 aaKnown RBP22.75■■□□□ 1.23
LTBP3-217ENST00000530785 LAMB4A4D0S4 1761 aa22.75■■□□□ 1.23
LTBP3-217ENST00000530785 ANKRD13DQ6ZTN6 518 aa22.75■■□□□ 1.23
LTBP3-217ENST00000530785 GPATCH3Q96I76 525 aa22.75■■□□□ 1.23
LTBP3-217ENST00000530785 PRDM11Q9NQV5 511 aa22.74■■□□□ 1.23
LTBP3-217ENST00000530785 MORC2Q9Y6X9 1032 aaPredicted RBP22.74■■□□□ 1.23
LTBP3-217ENST00000530785 NHSL1Q5SYE7 1610 aa22.74■■□□□ 1.23
LTBP3-217ENST00000530785 ARFGEF2Q9Y6D5 1785 aa22.74■■□□□ 1.23
LTBP3-217ENST00000530785 G3BP1Q13283 466 aaKnown RBP eCLIP22.74■■□□□ 1.23
LTBP3-217ENST00000530785 FOXD4L6Q3SYB3 417 aaPredicted RBP22.74■■□□□ 1.23
LTBP3-217ENST00000530785 FOXD4L3Q6VB84 417 aaPredicted RBP22.74■■□□□ 1.23
LTBP3-217ENST00000530785 AFDNP55196 1824 aaKnown RBP22.73■■□□□ 1.23
LTBP3-217ENST00000530785 TCHHQ07283 1943 aa22.73■■□□□ 1.23
LTBP3-217ENST00000530785 EPHA10Q5JZY3 1008 aa22.73■■□□□ 1.23
LTBP3-217ENST00000530785 SIL1Q9H173 461 aa22.73■■□□□ 1.23
LTBP3-217ENST00000530785 WDR17Q8IZU2 1322 aa22.73■■□□□ 1.23
LTBP3-217ENST00000530785 GOLGA6L6A8MZA4 724 aa22.73■■□□□ 1.23
LTBP3-217ENST00000530785 UBE2HP62256 183 aa22.73■■□□□ 1.23
LTBP3-217ENST00000530785 KLHDC4Q8TBB5 520 aa22.73■■□□□ 1.23
LTBP3-217ENST00000530785 EAF2Q96CJ1 260 aaPredicted RBP22.73■■□□□ 1.23
LTBP3-217ENST00000530785 SMTNL1A8MU46 457 aa22.72■■□□□ 1.23
LTBP3-217ENST00000530785 TOM1O60784 492 aa22.71■■□□□ 1.23
LTBP3-217ENST00000530785 COL5A2P05997 1499 aaPredicted RBP22.71■■□□□ 1.23
LTBP3-217ENST00000530785 TOM1L2Q6ZVM7 507 aa22.71■■□□□ 1.23
LTBP3-217ENST00000530785 SNX14Q9Y5W7 946 aa22.71■■□□□ 1.23
LTBP3-217ENST00000530785 PCDH11XQ9BZA7 1347 aa22.7■■□□□ 1.23
LTBP3-217ENST00000530785 PCDH11YQ9BZA8 1340 aa22.7■■□□□ 1.23
LTBP3-217ENST00000530785 UBAP1LF5GYI3 381 aa22.7■■□□□ 1.22
LTBP3-217ENST00000530785 ZBTB22O15209 634 aa22.7■■□□□ 1.22
LTBP3-217ENST00000530785 TLR7Q9NYK1 1049 aaKnown RBP22.7■■□□□ 1.22
LTBP3-217ENST00000530785 CNPY2Q9Y2B0 182 aa22.7■■□□□ 1.22
LTBP3-217ENST00000530785 CCDC8Q9H0W5 538 aaPredicted RBP22.7■■□□□ 1.22
LTBP3-217ENST00000530785 ABCA3Q99758 1704 aa22.69■■□□□ 1.22
LTBP3-217ENST00000530785 IRX5P78411 483 aaPredicted RBP22.69■■□□□ 1.22
LTBP3-217ENST00000530785 PLCB2Q00722 1185 aa22.69■■□□□ 1.22
LTBP3-217ENST00000530785 TERF2Q15554 542 aa22.69■■□□□ 1.22
LTBP3-217ENST00000530785 RASEFQ8IZ41 740 aa22.69■■□□□ 1.22
LTBP3-217ENST00000530785 EVI5LQ96CN4 794 aa22.69■■□□□ 1.22
LTBP3-217ENST00000530785 ZCRB1Q8TBF4 217 aaKnown RBP22.68■■□□□ 1.22
LTBP3-217ENST00000530785 RUFY2Q8WXA3 655 aa22.68■■□□□ 1.22
LTBP3-217ENST00000530785 CCDC66A2RUB6 948 aa22.68■■□□□ 1.22
LTBP3-217ENST00000530785 SPC24Q8NBT2 197 aa22.68■■□□□ 1.22
LTBP3-217ENST00000530785 KIF18AQ8NI77 898 aa22.68■■□□□ 1.22
LTBP3-217ENST00000530785 UBR2Q8IWV8 1755 aa22.67■■□□□ 1.22
LTBP3-217ENST00000530785 UBE3BQ7Z3V4 1068 aa22.67■■□□□ 1.22
LTBP3-217ENST00000530785 ATP5J2-PTCD1G3V325 749 aa22.67■■□□□ 1.22
LTBP3-217ENST00000530785 PTCD1O75127 700 aaKnown RBP22.67■■□□□ 1.22
LTBP3-217ENST00000530785 SLC20A2Q08357 652 aa22.66■■□□□ 1.22
LTBP3-217ENST00000530785 GIMAP6Q6P9H5 292 aa22.66■■□□□ 1.22
LTBP3-217ENST00000530785 PTH1RQ03431 593 aa22.66■■□□□ 1.22
LTBP3-217ENST00000530785 CERKQ8TCT0 537 aa22.66■■□□□ 1.22
LTBP3-217ENST00000530785 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 PLBD2Q8NHP8 589 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 TTC14Q96N46 770 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 VGLL3A8MV65 326 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 NBPF26B4DH59 902 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 ZSCAN22P10073 491 aaPredicted RBP22.65■■□□□ 1.22
LTBP3-217ENST00000530785 PTGS1P23219 599 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 KCNJ4P48050 445 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 NBPF14Q5TI25 921 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 NBPF10Q6P3W6 841 aaKnown RBP22.65■■□□□ 1.22
LTBP3-217ENST00000530785 NBPF15Q8N660 670 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 COPRSQ9NQ92 184 aa22.65■■□□□ 1.22
LTBP3-217ENST00000530785 PAPPAQ13219 1627 aa22.64■■□□□ 1.22
LTBP3-217ENST00000530785 RFX5P48382 616 aaPredicted RBP22.64■■□□□ 1.21
LTBP3-217ENST00000530785 PAXBP1Q9Y5B6 917 aa22.64■■□□□ 1.21
LTBP3-217ENST00000530785 KCPQ6ZWJ8 1503 aa22.64■■□□□ 1.21
LTBP3-217ENST00000530785 COL15A1P39059 1388 aa22.64■■□□□ 1.21
LTBP3-217ENST00000530785 A0A087WZG4 1122 aa22.64■■□□□ 1.21
LTBP3-217ENST00000530785 CDK11BP21127 795 aaKnown RBP22.64■■□□□ 1.21
LTBP3-217ENST00000530785 RABL6Q3YEC7 729 aaPredicted RBP22.64■■□□□ 1.21
LTBP3-217ENST00000530785 PAXIP1Q6ZW49 1069 aaPredicted RBP22.64■■□□□ 1.21
LTBP3-217ENST00000530785 KRT222Q8N1A0 295 aa22.63■■□□□ 1.21
LTBP3-217ENST00000530785 FAM53CQ9NYF3 392 aa22.63■■□□□ 1.21
LTBP3-217ENST00000530785 PTPN12Q05209 780 aaKnown RBP22.63■■□□□ 1.21
LTBP3-217ENST00000530785 BOLA2Q9H3K6 86 aa22.63■■□□□ 1.21
LTBP3-217ENST00000530785 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
LTBP3-217ENST00000530785 IL2RBP14784 551 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms