RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ZNF622Q969S3 477 aaKnown RBP eCLIP9.74□□□□□ -0.853e-7■□□□□ 10.1
CTNND1-227ENST00000530748 TAOK3Q9H2K8 898 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 IFIT1BQ5T764 474 aaKnown RBP9.74□□□□□ -0.85
CTNND1-227ENST00000530748 MICU3Q86XE3 530 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 TBC1D32Q96NH3 1257 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 CCDC113Q9H0I3 377 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 TCOF1Q13428 1488 aaKnown RBP9.74□□□□□ -0.85
CTNND1-227ENST00000530748 BMP15O95972 392 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 TNNT1P13805 278 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 SYCP3Q8IZU3 236 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 ERMNQ8TAM6 284 aa9.74□□□□□ -0.85
CTNND1-227ENST00000530748 RTL9Q8NET4 1388 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 ZNF804AQ7Z570 1209 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 SKAP1Q86WV1 359 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 TMTC2Q8N394 836 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 ADCY5O95622 1261 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 ADAMTS12P58397 1594 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 MCMDC2Q4G0Z9 681 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 TSHZ3Q63HK5 1081 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 USP25Q9UHP3 1055 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 TBCAO75347 108 aaKnown RBP9.73□□□□□ -0.85
CTNND1-227ENST00000530748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.73□□□□□ -0.854e-9■□□□□ 9.9
CTNND1-227ENST00000530748 CAVIN2O95810 425 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
CTNND1-227ENST00000530748 UTP14AQ9BVJ6 771 aaKnown RBP9.73□□□□□ -0.85
CTNND1-227ENST00000530748 TRPM2O94759 1503 aa9.73□□□□□ -0.85
CTNND1-227ENST00000530748 KLF18A0A0U1RQI7 1052 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 CYP7A1P22680 504 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 ATP8B2P98198 1209 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 HDAC9Q9UKV0 1011 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 MAPKBP1O60336 1514 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 BIN1O00499 593 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
CTNND1-227ENST00000530748 ZSCAN23Q3MJ62 389 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 XAGE3Q8WTP9 111 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 CTAGE1Q96RT6 745 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 ATP10BO94823 1461 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 ERICH4A6NGS2 130 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 MAP3K9P80192 1104 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 WDR78Q5VTH9 848 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 EHBP1Q8NDI1 1231 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 MAP3K5Q99683 1374 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 GOLGA6L10A0A0M3HER8 536 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 CCDC172P0C7W6 258 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 SDSP20132 328 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 CTNNA2P26232 953 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 JARID2Q92833 1246 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-227ENST00000530748 SAMM50Q9Y512 469 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 MAST1Q9Y2H9 1570 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 GSTTP1A0A1W2PQM5 241 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 ZBTB43O43298 467 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 PRC1O43663 620 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 RTN1Q16799 776 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 KSR2Q6VAB6 950 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 MICALCLQ6ZW33 695 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 TBC1D5Q92609 795 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 ESR2Q92731 530 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-227ENST00000530748 BICD1Q96G01 975 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 ESYT1Q9BSJ8 1104 aa9.72□□□□□ -0.85
CTNND1-227ENST00000530748 TFIP11Q9UBB9 837 aaKnown RBP9.72□□□□□ -0.85
CTNND1-227ENST00000530748 TRAF1Q13077 416 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 SNW1Q13573 536 aaKnown RBP9.71□□□□□ -0.85
CTNND1-227ENST00000530748 HOOK3Q86VS8 718 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 RBM27Q9P2N5 1060 aaKnown RBP9.71□□□□□ -0.85
CTNND1-227ENST00000530748 SHANK2Q9UPX8 1470 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 POLR3AO14802 1390 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-227ENST00000530748 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 MAGEB6P1A0A0J9YX57 407 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 STAMBPO95630 424 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 GNAT2P19087 354 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 IL15P40933 162 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-227ENST00000530748 UBA7P41226 1012 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 STAT6P42226 847 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 TCERG1LQ5VWI1 586 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 RRAGBQ5VZM2 374 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 TMX3Q96JJ7 454 aa9.71□□□□□ -0.85
CTNND1-227ENST00000530748 WDR62O43379 1518 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 ATP2B3Q16720 1220 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 Q6ZUG5 572 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 KCNG4Q8TDN1 519 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 ALG1Q9BT22 464 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.86
CTNND1-227ENST00000530748 BCCIPQ9P287 314 aaKnown RBP eCLIP9.71□□□□□ -0.861e-6■■■■□ 21.2
CTNND1-227ENST00000530748 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 GRM8O00222 908 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 SYKP43405 635 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
CTNND1-227ENST00000530748 TRIM47Q96LD4 638 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 TMCO5BA8MYB1 307 aa9.71□□□□□ -0.86
CTNND1-227ENST00000530748 DNA2P51530 1060 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms