RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 USP17L17D6RBQ6 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L19D6RCP7 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L20D6RJB6 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 ARSDP51689 593 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 USP17L24Q0WX57 530 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 SLC51AQ86UW1 340 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 FAM35AQ86V20 835 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 FBXO11Q86XK2 927 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 TRPM4Q8TD43 1214 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 ARXQ96QS3 562 aa6.27□□□□□ -1.41
NUP98-218ENST00000530516 DMGDHQ9UI17 866 aaKnown RBP6.27□□□□□ -1.41
NUP98-218ENST00000530516 INPP5BP32019 993 aa6.26□□□□□ -1.41
NUP98-218ENST00000530516 GPLD1P80108 840 aa6.26□□□□□ -1.41
NUP98-218ENST00000530516 FOXD4L6Q3SYB3 417 aaPredicted RBP6.26□□□□□ -1.41
NUP98-218ENST00000530516 FOXD4L3Q6VB84 417 aaPredicted RBP6.26□□□□□ -1.41
NUP98-218ENST00000530516 TP53INP1Q96A56 240 aa6.26□□□□□ -1.41
NUP98-218ENST00000530516 VTI1AQ96AJ9 217 aa6.26□□□□□ -1.41
NUP98-218ENST00000530516 VRTNQ9H8Y1 702 aa6.26□□□□□ -1.41
NUP98-218ENST00000530516 NAGPAQ9UK23 515 aa6.26□□□□□ -1.41
NUP98-218ENST00000530516 RFX1P22670 979 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 IDH3AP50213 366 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 DPYDQ12882 1025 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 CDCA8Q53HL2 280 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 ELMSAN1Q6PJG2 1045 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 IGF2-ASQ6U949 168 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 DHX32Q7L7V1 743 aaKnown RBP6.25□□□□□ -1.41
NUP98-218ENST00000530516 C14orf37Q86TY3 774 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 WFDC8Q8IUA0 241 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 ANKMY2Q8IV38 441 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 DMRTC2Q8IXT2 367 aaPredicted RBP6.25□□□□□ -1.41
NUP98-218ENST00000530516 MYO19Q96H55 970 aa6.25□□□□□ -1.41
NUP98-218ENST00000530516 SSBP4Q9BWG4 385 aaPredicted RBP6.25□□□□□ -1.41
NUP98-218ENST00000530516 SRA1Q9HD15 236 aaKnown RBP6.25□□□□□ -1.41
NUP98-218ENST00000530516 NRLP54845 237 aa6.24□□□□□ -1.41
NUP98-218ENST00000530516 CACTIN-AS1Q8N1I8 211 aa6.24□□□□□ -1.41
NUP98-218ENST00000530516 LPIN3Q9BQK8 851 aa6.24□□□□□ -1.41
NUP98-218ENST00000530516 BCS1LQ9Y276 419 aa6.24□□□□□ -1.41
NUP98-218ENST00000530516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.23□□□□□ -1.41
NUP98-218ENST00000530516 LGR5O75473 907 aa6.23□□□□□ -1.41
NUP98-218ENST00000530516 EGFRP00533 1210 aa6.23□□□□□ -1.41
NUP98-218ENST00000530516 RARAP10276 462 aa6.23□□□□□ -1.41
NUP98-218ENST00000530516 C11orf91Q3C1V1 193 aa6.23□□□□□ -1.41
NUP98-218ENST00000530516 SHISA2Q6UWI4 295 aa6.23□□□□□ -1.41
NUP98-218ENST00000530516 MAP4K3Q8IVH8 894 aa6.23□□□□□ -1.41
NUP98-218ENST00000530516 MICAL2O94851 1124 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 CPB1P15086 417 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 WEE1P30291 646 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 DGKZQ13574 1117 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 PERM1Q5SV97 790 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 WFDC12Q8WWY7 111 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 RNF112Q9ULX5 631 aa6.22□□□□□ -1.41
NUP98-218ENST00000530516 HOXD8P13378 290 aaPredicted RBP6.21□□□□□ -1.42
NUP98-218ENST00000530516 GRIK5Q16478 980 aa6.21□□□□□ -1.42
NUP98-218ENST00000530516 CCDC82Q8N4S0 544 aa6.21□□□□□ -1.42
NUP98-218ENST00000530516 TLR7Q9NYK1 1049 aaKnown RBP6.21□□□□□ -1.42
NUP98-218ENST00000530516 SOX18P35713 384 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 PLAURQ03405 335 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 KRTAP1-3Q8IUG1 177 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 IFT43Q96FT9 208 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 MUC3BQ9H195 1237 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 QTRT2Q9H974 415 aaKnown RBP6.2□□□□□ -1.42
NUP98-218ENST00000530516 KLK14Q9P0G3 267 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 ZFATQ9P243 1243 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 SERPINA10Q9UK55 444 aa6.2□□□□□ -1.42
NUP98-218ENST00000530516 NOVA2Q9UNW9 492 aaKnown RBP6.2□□□□□ -1.42
NUP98-218ENST00000530516 ZBTB42B2RXF5 422 aa6.19□□□□□ -1.42
NUP98-218ENST00000530516 HYAL3O43820 417 aaPredicted RBP6.19□□□□□ -1.42
NUP98-218ENST00000530516 PSAPP07602 524 aa6.19□□□□□ -1.42
NUP98-218ENST00000530516 EIF2AK2P19525 551 aaKnown RBP6.19□□□□□ -1.42
NUP98-218ENST00000530516 TARSP26639 723 aaKnown RBP6.19□□□□□ -1.42
NUP98-218ENST00000530516 GRNP28799 593 aaKnown RBP6.19□□□□□ -1.42
NUP98-218ENST00000530516 FAM69CQ0P6D2 419 aa6.19□□□□□ -1.42
NUP98-218ENST00000530516 TMEM130Q8N3G9 435 aa6.19□□□□□ -1.42
NUP98-218ENST00000530516 STK32AQ8WU08 396 aa6.19□□□□□ -1.42
NUP98-218ENST00000530516 CCDC97Q96F63 343 aaPredicted RBP6.19□□□□□ -1.42
NUP98-218ENST00000530516 MRPL18Q9H0U6 180 aaKnown RBP6.19□□□□□ -1.42
NUP98-218ENST00000530516 DLL1O00548 723 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 SASH3O75995 380 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 GHRHP01286 108 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 NOS3P29474 1203 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 IREB2P48200 963 aaKnown RBP6.18□□□□□ -1.42
NUP98-218ENST00000530516 ELOAQ14241 798 aaKnown RBP6.18□□□□□ -1.42
NUP98-218ENST00000530516 PRR23CQ6ZRP0 262 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 KRT25Q7Z3Z0 450 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 FAM200AQ8TCP9 573 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 SMG9Q9H0W8 520 aaKnown RBP6.18□□□□□ -1.42
NUP98-218ENST00000530516 AKTIPQ9H8T0 292 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 FAM13BQ9NYF5 915 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 TIMELESSQ9UNS1 1208 aa6.18□□□□□ -1.42
NUP98-218ENST00000530516 RTCBQ9Y3I0 505 aaKnown RBP6.18□□□□□ -1.42
NUP98-218ENST00000530516 GSC2O15499 205 aa6.17□□□□□ -1.42
NUP98-218ENST00000530516 XYLBO75191 536 aa6.17□□□□□ -1.42
NUP98-218ENST00000530516 ATG7O95352 703 aa6.17□□□□□ -1.42
NUP98-218ENST00000530516 SWI5Q1ZZU3 235 aa6.17□□□□□ -1.42
NUP98-218ENST00000530516 DZIP1LQ8IYY4 767 aaKnown RBP6.17□□□□□ -1.42
NUP98-218ENST00000530516 PBXIP1Q96AQ6 731 aa6.17□□□□□ -1.42
NUP98-218ENST00000530516 LOC102724428A0A0B4J2F2 783 aa6.16□□□□□ -1.42
NUP98-218ENST00000530516 SIK1P57059 783 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms