RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 PANK1Q8TE04 598 aa13.85□□□□□ -0.19
CAPN1-218ENST00000530442 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
CAPN1-218ENST00000530442 KAZALD1Q96I82 304 aa13.85□□□□□ -0.19
CAPN1-218ENST00000530442 SUCLG2Q96I99 432 aa13.85□□□□□ -0.19
CAPN1-218ENST00000530442 PIM2Q9P1W9 311 aa13.85□□□□□ -0.19
CAPN1-218ENST00000530442 HSP90B1P14625 803 aaKnown RBP13.84□□□□□ -0.19
CAPN1-218ENST00000530442 RRP1P56182 461 aaKnown RBP13.84□□□□□ -0.19
CAPN1-218ENST00000530442 EPHA10Q5JZY3 1008 aa13.84□□□□□ -0.19
CAPN1-218ENST00000530442 PRPF40BQ6NWY9 871 aaKnown RBP13.84□□□□□ -0.19
CAPN1-218ENST00000530442 CCDC85AQ96PX6 553 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-218ENST00000530442 MEIS3Q99687 375 aa13.84□□□□□ -0.19
CAPN1-218ENST00000530442 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
CAPN1-218ENST00000530442 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
CAPN1-218ENST00000530442 RTL9Q8NET4 1388 aa13.83□□□□□ -0.19
CAPN1-218ENST00000530442 SNED1Q8TER0 1413 aa13.83□□□□□ -0.2
CAPN1-218ENST00000530442 FOXO4P98177 505 aa13.83□□□□□ -0.2
CAPN1-218ENST00000530442 DALRD3Q5D0E6 543 aaKnown RBP13.83□□□□□ -0.2
CAPN1-218ENST00000530442 C20orf194Q5TEA3 1177 aa13.83□□□□□ -0.2
CAPN1-218ENST00000530442 SLC51AQ86UW1 340 aa13.83□□□□□ -0.2
CAPN1-218ENST00000530442 TTLL6Q8N841 843 aa13.83□□□□□ -0.2
CAPN1-218ENST00000530442 TTLL11Q8NHH1 800 aa13.83□□□□□ -0.2
CAPN1-218ENST00000530442 CNKSR1Q969H4 720 aa13.83□□□□□ -0.2
CAPN1-218ENST00000530442 GRAPQ13588 217 aa13.82□□□□□ -0.2
CAPN1-218ENST00000530442 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
CAPN1-218ENST00000530442 CCDC152Q4G0S7 254 aa13.82□□□□□ -0.2
CAPN1-218ENST00000530442 ITPRIPQ8IWB1 547 aa13.82□□□□□ -0.2
CAPN1-218ENST00000530442 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
CAPN1-218ENST00000530442 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-218ENST00000530442 GRAPLQ8TC17 118 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-218ENST00000530442 RBM17Q96I25 401 aaKnown RBP13.82□□□□□ -0.2
CAPN1-218ENST00000530442 CRAMP1Q96RY5 1269 aa13.82□□□□□ -0.2
CAPN1-218ENST00000530442 GREM2Q9H772 168 aa13.82□□□□□ -0.2
CAPN1-218ENST00000530442 DUOX1Q9NRD9 1551 aa13.81□□□□□ -0.2
CAPN1-218ENST00000530442 CSF1RP07333 972 aa13.81□□□□□ -0.2
CAPN1-218ENST00000530442 UBTFL1P0CB47 393 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-218ENST00000530442 MS4A1P11836 297 aa13.81□□□□□ -0.2
CAPN1-218ENST00000530442 RABL6Q3YEC7 729 aaPredicted RBP13.81□□□□□ -0.2
CAPN1-218ENST00000530442 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
CAPN1-218ENST00000530442 ANKRD44Q8N8A2 993 aa13.81□□□□□ -0.2
CAPN1-218ENST00000530442 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
CAPN1-218ENST00000530442 BICC1Q9H694 974 aaKnown RBP13.81□□□□□ -0.2
CAPN1-218ENST00000530442 SEC31BQ9NQW1 1179 aa13.81□□□□□ -0.2
CAPN1-218ENST00000530442 SBF1O95248 1867 aa13.8□□□□□ -0.2
CAPN1-218ENST00000530442 PPEF1O14829 653 aaPredicted RBP13.8□□□□□ -0.2
CAPN1-218ENST00000530442 ALDH1B1P30837 517 aa13.8□□□□□ -0.2
CAPN1-218ENST00000530442 PDE3AQ14432 1141 aa13.8□□□□□ -0.2
CAPN1-218ENST00000530442 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
CAPN1-218ENST00000530442 GPR162Q16538 588 aa13.8□□□□□ -0.2
CAPN1-218ENST00000530442 LMBR1LQ6UX01 489 aa13.8□□□□□ -0.2
CAPN1-218ENST00000530442 COG6Q9Y2V7 657 aa13.8□□□□□ -0.2
CAPN1-218ENST00000530442 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
CAPN1-218ENST00000530442 CCDC88AQ3V6T2 1871 aa13.8□□□□□ -0.2
CAPN1-218ENST00000530442 TIAM2Q8IVF5 1701 aa13.79□□□□□ -0.2
CAPN1-218ENST00000530442 C21orf2O43822 256 aa13.79□□□□□ -0.2
CAPN1-218ENST00000530442 GNAI3P08754 354 aa13.79□□□□□ -0.2
CAPN1-218ENST00000530442 OLFM4Q6UX06 510 aa13.79□□□□□ -0.2
CAPN1-218ENST00000530442 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
CAPN1-218ENST00000530442 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
CAPN1-218ENST00000530442 CHD4Q14839 1912 aa13.79□□□□□ -0.2
CAPN1-218ENST00000530442 ZBTB7BO15156 539 aaPredicted RBP13.78□□□□□ -0.2
CAPN1-218ENST00000530442 ITGA6P23229 1130 aa13.78□□□□□ -0.2
CAPN1-218ENST00000530442 CHMP3Q9Y3E7 222 aa13.78□□□□□ -0.2
CAPN1-218ENST00000530442 C1orf115Q9H7X2 142 aa13.77□□□□□ -0.21
CAPN1-218ENST00000530442 DDX19BQ9UMR2 479 aa13.77□□□□□ -0.21
CAPN1-218ENST00000530442 DICER1Q9UPY3 1922 aaKnown RBP13.77□□□□□ -0.21
CAPN1-218ENST00000530442 ANKRD18BA2A2Z9 1011 aa13.76□□□□□ -0.21
CAPN1-218ENST00000530442 BBOX1O75936 387 aa13.76□□□□□ -0.21
CAPN1-218ENST00000530442 GNAI2P04899 355 aa13.76□□□□□ -0.21
CAPN1-218ENST00000530442 IFIT5Q13325 482 aaKnown RBP13.76□□□□□ -0.21
CAPN1-218ENST00000530442 CCDC93Q567U6 631 aa13.76□□□□□ -0.21
CAPN1-218ENST00000530442 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
CAPN1-218ENST00000530442 CDC5LQ99459 802 aaKnown RBP13.76□□□□□ -0.21
CAPN1-218ENST00000530442 ATP6V0A2Q9Y487 856 aa13.76□□□□□ -0.21
CAPN1-218ENST00000530442 NFKBIEO00221 500 aa13.75□□□□□ -0.21
CAPN1-218ENST00000530442 GRIN3BO60391 1043 aa13.75□□□□□ -0.21
CAPN1-218ENST00000530442 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
CAPN1-218ENST00000530442 RASSF7Q02833 373 aa13.75□□□□□ -0.21
CAPN1-218ENST00000530442 SOGA3Q5TF21 947 aa13.75□□□□□ -0.21
CAPN1-218ENST00000530442 TMC4Q7Z404 712 aa13.75□□□□□ -0.21
CAPN1-218ENST00000530442 SUPT16HQ9Y5B9 1047 aaKnown RBP13.75□□□□□ -0.21
CAPN1-218ENST00000530442 IGHMBP2P38935 993 aaKnown RBP13.74□□□□□ -0.21
CAPN1-218ENST00000530442 RFX5P48382 616 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-218ENST00000530442 MTX1Q13505 466 aa13.74□□□□□ -0.21
CAPN1-218ENST00000530442 CCDC57Q2TAC2 916 aa13.74□□□□□ -0.21
CAPN1-218ENST00000530442 SP8Q8IXZ3 490 aa13.74□□□□□ -0.21
CAPN1-218ENST00000530442 ZNF594Q96JF6 807 aaPredicted RBP13.74□□□□□ -0.21
CAPN1-218ENST00000530442 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
CAPN1-218ENST00000530442 COL4A5P29400 1685 aa13.73□□□□□ -0.21
CAPN1-218ENST00000530442 LTBP3Q9NS15 1303 aa13.73□□□□□ -0.21
CAPN1-218ENST00000530442 PRELPP51888 382 aa13.73□□□□□ -0.21
CAPN1-218ENST00000530442 CC2D2BQ6DHV5 1058 aa13.73□□□□□ -0.21
CAPN1-218ENST00000530442 KLHDC4Q8TBB5 520 aa13.73□□□□□ -0.21
CAPN1-218ENST00000530442 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
CAPN1-218ENST00000530442 BSDC1Q9NW68 430 aaPredicted RBP13.73□□□□□ -0.21
CAPN1-218ENST00000530442 PNMA6EA0A0J9YXQ4 647 aa13.72□□□□□ -0.21
CAPN1-218ENST00000530442 DCAF8L1A6NGE4 600 aa13.72□□□□□ -0.21
CAPN1-218ENST00000530442 ARHGAP27Q6ZUM4 889 aa13.72□□□□□ -0.21
CAPN1-218ENST00000530442 CRBNQ96SW2 442 aa13.72□□□□□ -0.21
CAPN1-218ENST00000530442 TAOK3Q9H2K8 898 aa13.72□□□□□ -0.21
CAPN1-218ENST00000530442 ARAP2Q8WZ64 1704 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms