RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
CCS-205ENST00000530384 TAF1P21675 1872 aa21.75■■□□□ 1.07
CCS-205ENST00000530384 C1QTNF8P60827 252 aa21.75■■□□□ 1.07
CCS-205ENST00000530384 SP8Q8IXZ3 490 aa21.75■■□□□ 1.07
CCS-205ENST00000530384 TRMT2AQ8IZ69 625 aaKnown RBP21.75■■□□□ 1.07
CCS-205ENST00000530384 LINS1Q8NG48 757 aa21.75■■□□□ 1.07
CCS-205ENST00000530384 KIF3CO14782 793 aa21.74■■□□□ 1.07
CCS-205ENST00000530384 IARSP41252 1262 aaKnown RBP21.74■■□□□ 1.07
CCS-205ENST00000530384 NMRK2Q9NPI5 230 aa21.74■■□□□ 1.07
CCS-205ENST00000530384 MYH3P11055 1940 aa21.73■■□□□ 1.07
CCS-205ENST00000530384 GCKRQ14397 625 aa21.73■■□□□ 1.07
CCS-205ENST00000530384 CCDC152Q4G0S7 254 aa21.73■■□□□ 1.07
CCS-205ENST00000530384 JARID2Q92833 1246 aaPredicted RBP21.73■■□□□ 1.07
CCS-205ENST00000530384 F6X3S4 739 aa21.71■■□□□ 1.07
CCS-205ENST00000530384 H7C1W4 665 aa21.71■■□□□ 1.07
CCS-205ENST00000530384 CT47B1P0C2W7 299 aaPredicted RBP21.71■■□□□ 1.07
CCS-205ENST00000530384 UBE3BQ7Z3V4 1068 aa21.71■■□□□ 1.07
CCS-205ENST00000530384 SUPT20HQ8NEM7 779 aa21.71■■□□□ 1.07
CCS-205ENST00000530384 CELF1Q92879 486 aaKnown RBP21.71■■□□□ 1.07
CCS-205ENST00000530384 LRRC37AA6NMS7 1700 aa21.71■■□□□ 1.07
CCS-205ENST00000530384 DPP8Q6V1X1 898 aaPredicted RBP21.7■■□□□ 1.06
CCS-205ENST00000530384 MPNDQ8N594 471 aa21.7■■□□□ 1.06
CCS-205ENST00000530384 MRPL50Q8N5N7 158 aaKnown RBP21.7■■□□□ 1.06
CCS-205ENST00000530384 JDP2Q8WYK2 163 aa21.7■■□□□ 1.06
CCS-205ENST00000530384 VPS33BQ9H267 617 aa21.7■■□□□ 1.06
CCS-205ENST00000530384 RRAGCQ9HB90 399 aa21.7■■□□□ 1.06
CCS-205ENST00000530384 CTSWP56202 376 aa21.69■■□□□ 1.06
CCS-205ENST00000530384 RPS8P62241 208 aaKnown RBP21.69■■□□□ 1.06
CCS-205ENST00000530384 ALDH1L2Q3SY69 923 aa21.69■■□□□ 1.06
CCS-205ENST00000530384 BEND3Q5T5X7 828 aa21.69■■□□□ 1.06
CCS-205ENST00000530384 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
CCS-205ENST00000530384 RTFDC1Q9BY42 306 aaPredicted RBP21.69■■□□□ 1.06
CCS-205ENST00000530384 WDR90Q96KV7 1748 aa21.69■■□□□ 1.06
CCS-205ENST00000530384 C16orf71Q8IYS4 520 aaPredicted RBP21.68■■□□□ 1.06
CCS-205ENST00000530384 LARGE2Q8N3Y3 721 aa21.68■■□□□ 1.06
CCS-205ENST00000530384 SSH1Q8WYL5 1049 aa21.68■■□□□ 1.06
CCS-205ENST00000530384 PLA2G12BQ9BX93 195 aa21.68■■□□□ 1.06
CCS-205ENST00000530384 PTPRCP08575 1304 aa21.68■■□□□ 1.06
CCS-205ENST00000530384 TOMM70O94826 608 aa21.67■■□□□ 1.06
CCS-205ENST00000530384 VEGFAP15692 232 aaPredicted RBP21.67■■□□□ 1.06
CCS-205ENST00000530384 SEC31BQ9NQW1 1179 aa21.67■■□□□ 1.06
CCS-205ENST00000530384 FZD9O00144 591 aa21.66■■□□□ 1.06
CCS-205ENST00000530384 PPIP5K2O43314 1243 aa21.66■■□□□ 1.06
CCS-205ENST00000530384 ALDH1L1O75891 902 aa21.66■■□□□ 1.06
CCS-205ENST00000530384 CASP7P55210 303 aa21.66■■□□□ 1.06
CCS-205ENST00000530384 HNRNPUQ00839 825 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCS-205ENST00000530384 SLC4A10Q6U841 1118 aa21.66■■□□□ 1.06
CCS-205ENST00000530384 TTLL11Q8NHH1 800 aa21.66■■□□□ 1.06
CCS-205ENST00000530384 CCDC85AQ96PX6 553 aaPredicted RBP21.66■■□□□ 1.06
CCS-205ENST00000530384 RTL9Q8NET4 1388 aa21.65■■□□□ 1.06
CCS-205ENST00000530384 CDC5LQ99459 802 aaKnown RBP21.65■■□□□ 1.06
CCS-205ENST00000530384 SRCIN1Q9C0H9 1055 aa21.65■■□□□ 1.06
CCS-205ENST00000530384 COL4A1P02462 1669 aa21.65■■□□□ 1.06
CCS-205ENST00000530384 DDNO94850 711 aaPredicted RBP21.64■■□□□ 1.05
CCS-205ENST00000530384 ANKRD18AQ8IVF6 992 aa21.64■■□□□ 1.05
CCS-205ENST00000530384 NIM1KQ8IY84 436 aa21.64■■□□□ 1.05
CCS-205ENST00000530384 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
CCS-205ENST00000530384 SMC4Q9NTJ3 1288 aa21.64■■□□□ 1.05
CCS-205ENST00000530384 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
CCS-205ENST00000530384 ZNF541Q9H0D2 1346 aa21.63■■□□□ 1.05
CCS-205ENST00000530384 EIF6P56537 245 aaKnown RBP21.63■■□□□ 1.05
CCS-205ENST00000530384 AOC3Q16853 763 aa21.63■■□□□ 1.05
CCS-205ENST00000530384 RBM46Q8TBY0 533 aaKnown RBP21.63■■□□□ 1.05
CCS-205ENST00000530384 COL4A5P29400 1685 aa21.63■■□□□ 1.05
CCS-205ENST00000530384 DUOX1Q9NRD9 1551 aa21.62■■□□□ 1.05
CCS-205ENST00000530384 GRM8O00222 908 aa21.62■■□□□ 1.05
CCS-205ENST00000530384 KIAA2012Q0VF49 1180 aa21.62■■□□□ 1.05
CCS-205ENST00000530384 L3MBTL3Q96JM7 780 aaPredicted RBP21.62■■□□□ 1.05
CCS-205ENST00000530384 GREM2Q9H772 168 aa21.62■■□□□ 1.05
CCS-205ENST00000530384 C9orf78Q9NZ63 289 aaPredicted RBP21.62■■□□□ 1.05
CCS-205ENST00000530384 SCN4AP35499 1836 aa21.62■■□□□ 1.05
CCS-205ENST00000530384 GPSM2P81274 684 aa21.61■■□□□ 1.05
CCS-205ENST00000530384 GPC2Q8N158 579 aa21.61■■□□□ 1.05
CCS-205ENST00000530384 LTBP1Q14766 1721 aa21.6■■□□□ 1.05
CCS-205ENST00000530384 IQCA1LA6NCM1 817 aa21.6■■□□□ 1.05
CCS-205ENST00000530384 POTECB2RU33 542 aa21.6■■□□□ 1.05
CCS-205ENST00000530384 CSF1RP07333 972 aa21.6■■□□□ 1.05
CCS-205ENST00000530384 PODXL2Q9NZ53 605 aa21.6■■□□□ 1.05
CCS-205ENST00000530384 C6orf229H3BNL8 230 aa21.59■■□□□ 1.05
CCS-205ENST00000530384 BRPF1P55201 1214 aaPredicted RBP21.59■■□□□ 1.05
CCS-205ENST00000530384 WASHC4Q2M389 1173 aa21.59■■□□□ 1.05
CCS-205ENST00000530384 EYA3Q99504 573 aa21.59■■□□□ 1.05
CCS-205ENST00000530384 BSDC1Q9NW68 430 aaPredicted RBP21.59■■□□□ 1.05
CCS-205ENST00000530384 ANKIB1Q9P2G1 1089 aa21.59■■□□□ 1.05
CCS-205ENST00000530384 ZNRF3Q9ULT6 936 aa21.59■■□□□ 1.05
CCS-205ENST00000530384 SPEF2Q9C093 1822 aa21.58■■□□□ 1.05
CCS-205ENST00000530384 ITGA6P23229 1130 aa21.58■■□□□ 1.05
CCS-205ENST00000530384 IGHMBP2P38935 993 aaKnown RBP21.58■■□□□ 1.05
CCS-205ENST00000530384 POLLQ9UGP5 575 aa21.58■■□□□ 1.05
CCS-205ENST00000530384 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
CCS-205ENST00000530384 FSTL1Q12841 308 aa21.57■■□□□ 1.04
CCS-205ENST00000530384 FAM161AQ3B820 660 aa21.57■■□□□ 1.04
CCS-205ENST00000530384 SMC1BQ8NDV3 1235 aa21.57■■□□□ 1.04
CCS-205ENST00000530384 TBC1D16Q8TBP0 767 aa21.57■■□□□ 1.04
CCS-205ENST00000530384 GGA1Q9UJY5 639 aa21.57■■□□□ 1.04
CCS-205ENST00000530384 XDHP47989 1333 aa21.56■■□□□ 1.04
CCS-205ENST00000530384 FOXO4P98177 505 aa21.56■■□□□ 1.04
CCS-205ENST00000530384 HACL1Q9UJ83 578 aa21.56■■□□□ 1.04
CCS-205ENST00000530384 GJA3Q9Y6H8 435 aa21.56■■□□□ 1.04
CCS-205ENST00000530384 UTYO14607 1347 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms