RNA–Protein interactions for RNA: ENST00000530164.5

RPS3-214, Transcript of ribosomal protein S3, humanhuman

TSL 1 (best) BASIC

Gene RPS3, Length 1,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-214ENST00000530164 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 GOLGA6L3A6NEY3 463 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 SLC34A2O95436 690 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 A1BGP04217 495 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
RPS3-214ENST00000530164 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 DEFB115Q30KQ5 88 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 CLEC4GQ6UXB4 293 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 CHD1LQ86WJ1 897 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 FMNL2Q96PY5 1086 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 HACL1Q9UJ83 578 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
RPS3-214ENST00000530164 GNAT3A8MTJ3 354 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
RPS3-214ENST00000530164 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
RPS3-214ENST00000530164 DZIP3Q86Y13 1208 aaKnown RBP11.74□□□□□ -0.53
RPS3-214ENST00000530164 IFT57Q9NWB7 429 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 UBR2Q8IWV8 1755 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 SCN4AP35499 1836 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 ABCC4O15439 1325 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 KLRG2A4D1S0 409 aaPredicted RBP11.74□□□□□ -0.53
RPS3-214ENST00000530164 NPR1P16066 1061 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 EPHX2P34913 555 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 GNAI1P63096 354 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 NBPF5PQ86XG9 351 aaPredicted RBP11.74□□□□□ -0.53
RPS3-214ENST00000530164 RTKN2Q8IZC4 609 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 CNTROBQ8N137 903 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 GAS2L2Q8NHY3 880 aa11.74□□□□□ -0.53
RPS3-214ENST00000530164 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
RPS3-214ENST00000530164 ZNF541Q9H0D2 1346 aa11.73□□□□□ -0.53
RPS3-214ENST00000530164 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
RPS3-214ENST00000530164 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
RPS3-214ENST00000530164 LMOD3Q0VAK6 560 aa11.73□□□□□ -0.53
RPS3-214ENST00000530164 MRPL50Q8N5N7 158 aaKnown RBP11.73□□□□□ -0.53
RPS3-214ENST00000530164 ABHD8Q96I13 439 aa11.73□□□□□ -0.53
RPS3-214ENST00000530164 FZD9O00144 591 aa11.72□□□□□ -0.53
RPS3-214ENST00000530164 MRE11P49959 708 aa11.72□□□□□ -0.53
RPS3-214ENST00000530164 TPTE2Q6XPS3 522 aa11.72□□□□□ -0.53
RPS3-214ENST00000530164 WDR33Q9C0J8 1336 aaKnown RBP11.72□□□□□ -0.53
RPS3-214ENST00000530164 SCN7AQ01118 1682 aa11.72□□□□□ -0.53
RPS3-214ENST00000530164 ZBTB7BO15156 539 aaPredicted RBP11.72□□□□□ -0.53
RPS3-214ENST00000530164 TRAK2O60296 914 aa11.72□□□□□ -0.53
RPS3-214ENST00000530164 HSPA8P11142 646 aaKnown RBP11.72□□□□□ -0.53
RPS3-214ENST00000530164 MAP1SQ66K74 1059 aaPredicted RBP11.72□□□□□ -0.53
RPS3-214ENST00000530164 GPC2Q8N158 579 aa11.72□□□□□ -0.53
RPS3-214ENST00000530164 ZNF652Q9Y2D9 606 aa11.72□□□□□ -0.53
RPS3-214ENST00000530164 VAMP4O75379 141 aa11.71□□□□□ -0.53
RPS3-214ENST00000530164 SKOR2Q2VWA4 1001 aaPredicted RBP11.71□□□□□ -0.53
RPS3-214ENST00000530164 ABT1Q9ULW3 272 aaKnown RBP11.71□□□□□ -0.53
RPS3-214ENST00000530164 USP16Q9Y5T5 823 aa11.71□□□□□ -0.53
RPS3-214ENST00000530164 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 BTBD11A6QL63 1104 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 RGL2O15211 777 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPS3-214ENST00000530164 ALDH1B1P30837 517 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 IARSP41252 1262 aaKnown RBP11.7□□□□□ -0.54
RPS3-214ENST00000530164 OLFM4Q6UX06 510 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 API5Q9BZZ5 524 aaKnown RBP11.7□□□□□ -0.54
RPS3-214ENST00000530164 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 KCNQ3O43525 872 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
RPS3-214ENST00000530164 DDX21Q9NR30 783 aaKnown RBP eCLIP11.7□□□□□ -0.545e-35■□□□□ 8.5
RPS3-214ENST00000530164 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
RPS3-214ENST00000530164 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
RPS3-214ENST00000530164 CLEC17AQ6ZS10 378 aa11.69□□□□□ -0.54
RPS3-214ENST00000530164 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
RPS3-214ENST00000530164 NIP7Q9Y221 180 aaKnown RBP eCLIP11.69□□□□□ -0.541e-39■■■■■ 33
RPS3-214ENST00000530164 PSMD1Q99460 953 aa11.68□□□□□ -0.54
RPS3-214ENST00000530164 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
RPS3-214ENST00000530164 LNPKQ9C0E8 428 aa11.68□□□□□ -0.54
RPS3-214ENST00000530164 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
RPS3-214ENST00000530164 SNRPA1P09661 255 aaKnown RBP11.68□□□□□ -0.54
RPS3-214ENST00000530164 ECE1P42892 770 aa11.68□□□□□ -0.54
RPS3-214ENST00000530164 ARFGEF2Q9Y6D5 1785 aa11.67□□□□□ -0.54
RPS3-214ENST00000530164 IBTKQ9P2D0 1353 aaPredicted RBP11.67□□□□□ -0.54
RPS3-214ENST00000530164 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
RPS3-214ENST00000530164 CDC45O75419 566 aa11.67□□□□□ -0.54
RPS3-214ENST00000530164 RGS19P49795 217 aa11.67□□□□□ -0.54
RPS3-214ENST00000530164 MLLT1Q03111 559 aaPredicted RBP11.67□□□□□ -0.54
RPS3-214ENST00000530164 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
RPS3-214ENST00000530164 KIF2CQ99661 725 aa11.67□□□□□ -0.54
RPS3-214ENST00000530164 CCDC85CA6NKD9 419 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 GTF2E1P29083 439 aaPredicted RBP11.66□□□□□ -0.54
RPS3-214ENST00000530164 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
RPS3-214ENST00000530164 CLCN1P35523 988 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 EIF6P56537 245 aaKnown RBP11.66□□□□□ -0.54
RPS3-214ENST00000530164 CAPNS2Q96L46 248 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 GPR101Q96P66 508 aaPredicted RBP11.66□□□□□ -0.54
RPS3-214ENST00000530164 CACNA1SQ13698 1873 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 FAM177BA6PVY3 158 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 K7ELQ4 463 aaPredicted RBP11.66□□□□□ -0.54
RPS3-214ENST00000530164 CRY2Q49AN0 593 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
RPS3-214ENST00000530164 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
RPS3-214ENST00000530164 RRAGDQ9NQL2 400 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms