RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 RABL6Q3YEC7 729 aaPredicted RBP21.95■■□□□ 1.1
CLP1-204ENST00000529773 TTLL11Q8NHH1 800 aa21.95■■□□□ 1.1
CLP1-204ENST00000529773 SUCLG2Q96I99 432 aa21.95■■□□□ 1.1
CLP1-204ENST00000529773 ITPRIPQ8IWB1 547 aa21.94■■□□□ 1.1
CLP1-204ENST00000529773 CRAMP1Q96RY5 1269 aa21.94■■□□□ 1.1
CLP1-204ENST00000529773 ARFGEF1Q9Y6D6 1849 aa21.94■■□□□ 1.1
CLP1-204ENST00000529773 ZBTB7BO15156 539 aaPredicted RBP21.93■■□□□ 1.1
CLP1-204ENST00000529773 COL4A1P02462 1669 aa21.93■■□□□ 1.1
CLP1-204ENST00000529773 UBTFL1P0CB47 393 aaPredicted RBP21.93■■□□□ 1.1
CLP1-204ENST00000529773 CCDC152Q4G0S7 254 aa21.93■■□□□ 1.1
CLP1-204ENST00000529773 EPHA10Q5JZY3 1008 aa21.93■■□□□ 1.1
CLP1-204ENST00000529773 RPGRQ92834 1020 aaKnown RBP21.93■■□□□ 1.1
CLP1-204ENST00000529773 HDAC5Q9UQL6 1122 aa21.93■■□□□ 1.1
CLP1-204ENST00000529773 LRRC37AA6NMS7 1700 aa21.92■■□□□ 1.1
CLP1-204ENST00000529773 ANKRD44Q8N8A2 993 aa21.92■■□□□ 1.1
CLP1-204ENST00000529773 CNKSR1Q969H4 720 aa21.92■■□□□ 1.1
CLP1-204ENST00000529773 PIM2Q9P1W9 311 aa21.92■■□□□ 1.1
CLP1-204ENST00000529773 DDX19BQ9UMR2 479 aa21.92■■□□□ 1.1
CLP1-204ENST00000529773 RBM17Q96I25 401 aaKnown RBP21.91■■□□□ 1.1
CLP1-204ENST00000529773 COG6Q9Y2V7 657 aa21.91■■□□□ 1.1
CLP1-204ENST00000529773 ALDH1B1P30837 517 aa21.9■■□□□ 1.1
CLP1-204ENST00000529773 TTLL6Q8N841 843 aa21.9■■□□□ 1.1
CLP1-204ENST00000529773 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
CLP1-204ENST00000529773 SLX4Q8IY92 1834 aa21.9■■□□□ 1.1
CLP1-204ENST00000529773 SNED1Q8TER0 1413 aa21.89■■□□□ 1.1
CLP1-204ENST00000529773 GRAPQ13588 217 aa21.89■■□□□ 1.09
CLP1-204ENST00000529773 GRAPLQ8TC17 118 aaPredicted RBP21.89■■□□□ 1.09
CLP1-204ENST00000529773 GREM2Q9H772 168 aa21.89■■□□□ 1.09
CLP1-204ENST00000529773 SUPT16HQ9Y5B9 1047 aaKnown RBP21.89■■□□□ 1.09
CLP1-204ENST00000529773 CACNA1SQ13698 1873 aa21.88■■□□□ 1.09
CLP1-204ENST00000529773 MTX1Q13505 466 aa21.88■■□□□ 1.09
CLP1-204ENST00000529773 FAM161AQ3B820 660 aa21.88■■□□□ 1.09
CLP1-204ENST00000529773 DALRD3Q5D0E6 543 aaKnown RBP21.88■■□□□ 1.09
CLP1-204ENST00000529773 PRPF40BQ6NWY9 871 aaKnown RBP21.88■■□□□ 1.09
CLP1-204ENST00000529773 LMBR1LQ6UX01 489 aa21.88■■□□□ 1.09
CLP1-204ENST00000529773 DDX46Q7L014 1031 aaKnown RBP21.88■■□□□ 1.09
CLP1-204ENST00000529773 ZNF622Q969S3 477 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLP1-204ENST00000529773 CHMP4BQ9H444 224 aaKnown RBP21.88■■□□□ 1.09
CLP1-204ENST00000529773 LRRFIP2Q9Y608 721 aaKnown RBP21.88■■□□□ 1.09
CLP1-204ENST00000529773 GNAI2P04899 355 aa21.87■■□□□ 1.09
CLP1-204ENST00000529773 C7orf43Q8WVR3 580 aa21.87■■□□□ 1.09
CLP1-204ENST00000529773 ZBTB40Q9NUA8 1239 aa21.87■■□□□ 1.09
CLP1-204ENST00000529773 TAF1P21675 1872 aa21.86■■□□□ 1.09
CLP1-204ENST00000529773 TMC4Q7Z404 712 aa21.86■■□□□ 1.09
CLP1-204ENST00000529773 BBOX1O75936 387 aa21.85■■□□□ 1.09
CLP1-204ENST00000529773 ITGA6P23229 1130 aa21.85■■□□□ 1.09
CLP1-204ENST00000529773 CELF1Q92879 486 aaKnown RBP21.85■■□□□ 1.09
CLP1-204ENST00000529773 CDC5LQ99459 802 aaKnown RBP21.85■■□□□ 1.09
CLP1-204ENST00000529773 SEC31BQ9NQW1 1179 aa21.85■■□□□ 1.09
CLP1-204ENST00000529773 LTBP1Q14766 1721 aa21.85■■□□□ 1.09
CLP1-204ENST00000529773 CENPBP07199 599 aaPredicted RBP21.84■■□□□ 1.09
CLP1-204ENST00000529773 GOLGB1Q14789 3259 aaKnown RBP21.83■■□□□ 1.09
CLP1-204ENST00000529773 PPEF1O14829 653 aaPredicted RBP21.83■■□□□ 1.09
CLP1-204ENST00000529773 YBX3P16989 372 aaKnown RBP eCLIP21.83■■□□□ 1.09
CLP1-204ENST00000529773 IFIT5Q13325 482 aaKnown RBP21.83■■□□□ 1.09
CLP1-204ENST00000529773 CCDC85AQ96PX6 553 aaPredicted RBP21.83■■□□□ 1.09
CLP1-204ENST00000529773 ANKRD18BA2A2Z9 1011 aa21.82■■□□□ 1.08
CLP1-204ENST00000529773 RFX5P48382 616 aaPredicted RBP21.82■■□□□ 1.08
CLP1-204ENST00000529773 RPS8P62241 208 aaKnown RBP21.82■■□□□ 1.08
CLP1-204ENST00000529773 SOGA3Q5TF21 947 aa21.82■■□□□ 1.08
CLP1-204ENST00000529773 BCS1LQ9Y276 419 aa21.82■■□□□ 1.08
CLP1-204ENST00000529773 ATP6V0A2Q9Y487 856 aa21.82■■□□□ 1.08
CLP1-204ENST00000529773 FER1L6Q2WGJ9 1857 aa21.81■■□□□ 1.08
CLP1-204ENST00000529773 SPEF2Q9C093 1822 aa21.81■■□□□ 1.08
CLP1-204ENST00000529773 CCDC57Q2TAC2 916 aa21.81■■□□□ 1.08
CLP1-204ENST00000529773 CC2D2BQ6DHV5 1058 aa21.81■■□□□ 1.08
CLP1-204ENST00000529773 ANKRD18AQ8IVF6 992 aa21.81■■□□□ 1.08
CLP1-204ENST00000529773 A0A1B0GUL6 1792 aa21.81■■□□□ 1.08
CLP1-204ENST00000529773 GRIPAP1Q4V328 841 aa21.8■■□□□ 1.08
CLP1-204ENST00000529773 SP8Q8IXZ3 490 aa21.8■■□□□ 1.08
CLP1-204ENST00000529773 CRBNQ96SW2 442 aa21.8■■□□□ 1.08
CLP1-204ENST00000529773 BSDC1Q9NW68 430 aaPredicted RBP21.8■■□□□ 1.08
CLP1-204ENST00000529773 DUOX1Q9NRD9 1551 aa21.79■■□□□ 1.08
CLP1-204ENST00000529773 AAMPQ13685 434 aa21.79■■□□□ 1.08
CLP1-204ENST00000529773 CEP85Q6P2H3 762 aa21.79■■□□□ 1.08
CLP1-204ENST00000529773 C1orf115Q9H7X2 142 aa21.79■■□□□ 1.08
CLP1-204ENST00000529773 CHMP3Q9Y3E7 222 aa21.79■■□□□ 1.08
CLP1-204ENST00000529773 POLA2Q14181 598 aa21.78■■□□□ 1.08
CLP1-204ENST00000529773 LTBP3Q9NS15 1303 aa21.78■■□□□ 1.08
CLP1-204ENST00000529773 C21orf2O43822 256 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 IGHMBP2P38935 993 aaKnown RBP21.77■■□□□ 1.08
CLP1-204ENST00000529773 ATP8B2P98198 1209 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 PTPN12Q05209 780 aaKnown RBP21.77■■□□□ 1.08
CLP1-204ENST00000529773 CCDC93Q567U6 631 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 SLC51AQ86UW1 340 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 SSH3Q8TE77 659 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 COPRSQ9NQ92 184 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 FBXO3Q9UK99 471 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 WWC3Q9ULE0 1092 aa21.77■■□□□ 1.08
CLP1-204ENST00000529773 PNMA6EA0A0J9YXQ4 647 aa21.76■■□□□ 1.07
CLP1-204ENST00000529773 SRGAP3O43295 1099 aa21.76■■□□□ 1.07
CLP1-204ENST00000529773 GRIN3BO60391 1043 aa21.76■■□□□ 1.07
CLP1-204ENST00000529773 RPAP2Q8IXW5 612 aaPredicted RBP21.76■■□□□ 1.07
CLP1-204ENST00000529773 GPR162Q16538 588 aa21.75■■□□□ 1.07
CLP1-204ENST00000529773 RTKN2Q8IZC4 609 aa21.75■■□□□ 1.07
CLP1-204ENST00000529773 PODXL2Q9NZ53 605 aa21.75■■□□□ 1.07
CLP1-204ENST00000529773 NFKBIEO00221 500 aa21.74■■□□□ 1.07
CLP1-204ENST00000529773 OLFM4Q6UX06 510 aa21.74■■□□□ 1.07
CLP1-204ENST00000529773 ZNF594Q96JF6 807 aaPredicted RBP21.74■■□□□ 1.07
CLP1-204ENST00000529773 PSMD1Q99460 953 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms