RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 NECTIN2Q92692 538 aa14.05□□□□□ -0.16
LDLRAD3-204ENST00000529759 RTFDC1Q9BY42 306 aaPredicted RBP14.05□□□□□ -0.16
LDLRAD3-204ENST00000529759 MCOLN1Q9GZU1 580 aa14.05□□□□□ -0.16
LDLRAD3-204ENST00000529759 KCNQ5Q9NR82 932 aa14.05□□□□□ -0.16
LDLRAD3-204ENST00000529759 ZNRF3Q9ULT6 936 aa14.05□□□□□ -0.16
LDLRAD3-204ENST00000529759 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
LDLRAD3-204ENST00000529759 CIAPIN1Q6FI81 312 aa14.04□□□□□ -0.16
LDLRAD3-204ENST00000529759 ZNF408Q9H9D4 720 aa14.04□□□□□ -0.16
LDLRAD3-204ENST00000529759 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
LDLRAD3-204ENST00000529759 ERBB4Q15303 1308 aa14.04□□□□□ -0.16
LDLRAD3-204ENST00000529759 ECE1P42892 770 aa14.03□□□□□ -0.16
LDLRAD3-204ENST00000529759 RALBP1Q15311 655 aa14.03□□□□□ -0.16
LDLRAD3-204ENST00000529759 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
LDLRAD3-204ENST00000529759 NLRP3Q96P20 1036 aa14.03□□□□□ -0.16
LDLRAD3-204ENST00000529759 UTP14AQ9BVJ6 771 aaKnown RBP14.03□□□□□ -0.16
LDLRAD3-204ENST00000529759 MAP2K2P36507 400 aa14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 AIMP1Q12904 312 aaKnown RBP14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 SAMD7Q7Z3H4 446 aa14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 PPP1R42Q7Z4L9 355 aa14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 NLRP10Q86W26 655 aa14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 SP8Q8IXZ3 490 aa14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 CNOT7Q9UIV1 285 aaKnown RBP14.02□□□□□ -0.17
LDLRAD3-204ENST00000529759 KIAA2012Q0VF49 1180 aa14.01□□□□□ -0.17
LDLRAD3-204ENST00000529759 DPP8Q6V1X1 898 aaPredicted RBP14.01□□□□□ -0.17
LDLRAD3-204ENST00000529759 COPS6Q7L5N1 327 aa14.01□□□□□ -0.17
LDLRAD3-204ENST00000529759 MPNDQ8N594 471 aa14.01□□□□□ -0.17
LDLRAD3-204ENST00000529759 BEGAINQ9BUH8 593 aa14.01□□□□□ -0.17
LDLRAD3-204ENST00000529759 TSPYL4Q9UJ04 414 aa14.01□□□□□ -0.17
LDLRAD3-204ENST00000529759 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
LDLRAD3-204ENST00000529759 GRIPAP1Q4V328 841 aa14□□□□□ -0.17
LDLRAD3-204ENST00000529759 PARP10Q53GL7 1025 aa14□□□□□ -0.17
LDLRAD3-204ENST00000529759 XAGE3Q8WTP9 111 aa14□□□□□ -0.17
LDLRAD3-204ENST00000529759 BABAM1Q9NWV8 329 aa14□□□□□ -0.17
LDLRAD3-204ENST00000529759 DDX60Q8IY21 1712 aaKnown RBP13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 ASTN2O75129 1339 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 MYBBP1AQ9BQG0 1328 aaKnown RBP13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 FAM155AB1AL88 458 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 PSMD14O00487 310 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 BBOX1O75936 387 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 RIPK4P57078 832 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 MICALL2Q8IY33 904 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 CFAP44Q96MT7 982 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 BCL2L13Q9BXK5 485 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 DBNDD1Q9H9R9 158 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 SCN9AQ15858 1988 aa13.99□□□□□ -0.17
LDLRAD3-204ENST00000529759 BRPF1P55201 1214 aaPredicted RBP13.98□□□□□ -0.17
LDLRAD3-204ENST00000529759 DGKZQ13574 1117 aa13.98□□□□□ -0.17
LDLRAD3-204ENST00000529759 CELF1Q92879 486 aaKnown RBP13.98□□□□□ -0.17
LDLRAD3-204ENST00000529759 VPS33BQ9H267 617 aa13.98□□□□□ -0.17
LDLRAD3-204ENST00000529759 POLLQ9UGP5 575 aa13.98□□□□□ -0.17
LDLRAD3-204ENST00000529759 PDE4DIPQ5VU43 2346 aa13.98□□□□□ -0.17
LDLRAD3-204ENST00000529759 ADM5C9JUS6 153 aa13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 TMPOP42166 694 aaKnown RBP13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 HUNKP57058 714 aa13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 TCIRG1Q13488 830 aa13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 GRAPQ13588 217 aa13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 RBM26Q5T8P6 1007 aaKnown RBP13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 CDC37L1Q7L3B6 337 aa13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 GRAPLQ8TC17 118 aaPredicted RBP13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 TRMT112Q9UI30 125 aaKnown RBP13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 LRRC37AA6NMS7 1700 aa13.97□□□□□ -0.17
LDLRAD3-204ENST00000529759 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 GPSM2P81274 684 aa13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 DOK7Q18PE1 504 aa13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 DDX46Q7L014 1031 aaKnown RBP13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 SUPT20HQ8NEM7 779 aa13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 ZC3H15Q8WU90 426 aaKnown RBP13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 FAM89AQ96GI7 184 aa13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 HHIPL1Q96JK4 782 aa13.96□□□□□ -0.17
LDLRAD3-204ENST00000529759 ATP5J2-PTCD1G3V325 749 aa13.95□□□□□ -0.18
LDLRAD3-204ENST00000529759 TNIP1Q15025 636 aa13.95□□□□□ -0.18
LDLRAD3-204ENST00000529759 SCAF8Q9UPN6 1271 aaKnown RBP13.95□□□□□ -0.18
LDLRAD3-204ENST00000529759 WTIPA6NIX2 430 aaPredicted RBP13.94□□□□□ -0.18
LDLRAD3-204ENST00000529759 KIF23Q02241 960 aaPredicted RBP13.94□□□□□ -0.18
LDLRAD3-204ENST00000529759 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
LDLRAD3-204ENST00000529759 CHPF2Q9P2E5 772 aa13.94□□□□□ -0.18
LDLRAD3-204ENST00000529759 NSFL1CQ9UNZ2 370 aaKnown RBP13.94□□□□□ -0.18
LDLRAD3-204ENST00000529759 SH3TC1Q8TE82 1336 aa13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 H7C1D1 291 aa13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 SOX10P56693 466 aa13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 WASHC4Q2M389 1173 aa13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 KRT26Q7Z3Y9 468 aa13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
LDLRAD3-204ENST00000529759 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 CA12O43570 354 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 TRPA1O75762 1119 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 NOGQ13253 232 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 RGMBQ6NW40 437 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 DPF2Q92785 391 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 JARID2Q92833 1246 aaPredicted RBP13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 RUNDC1Q96C34 613 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 CSRNP1Q96S65 589 aa13.92□□□□□ -0.18
LDLRAD3-204ENST00000529759 ISCA1Q9BUE6 129 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms