RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ZFATQ9P243 1243 aa8.48□□□□□ -1.05
C11orf88-204ENST00000529661 TRIP4Q15650 581 aaPredicted RBP8.47□□□□□ -1.05
C11orf88-204ENST00000529661 ATCAYQ86WG3 371 aa8.47□□□□□ -1.05
C11orf88-204ENST00000529661 C11orf16Q9NQ32 467 aa8.47□□□□□ -1.05
C11orf88-204ENST00000529661 SLC6A14Q9UN76 642 aa8.47□□□□□ -1.05
C11orf88-204ENST00000529661 KCNMB2Q9Y691 235 aa8.47□□□□□ -1.05
C11orf88-204ENST00000529661 UBAP1LF5GYI3 381 aa8.46□□□□□ -1.06
C11orf88-204ENST00000529661 MPSTP25325 297 aa8.46□□□□□ -1.06
C11orf88-204ENST00000529661 LINC00114Q6XXX2 140 aa8.46□□□□□ -1.06
C11orf88-204ENST00000529661 DHX32Q7L7V1 743 aaKnown RBP8.46□□□□□ -1.06
C11orf88-204ENST00000529661 DCAF5Q96JK2 942 aa8.46□□□□□ -1.06
C11orf88-204ENST00000529661 ANO2Q9NQ90 1003 aa8.46□□□□□ -1.06
C11orf88-204ENST00000529661 M0R082 166 aa8.45□□□□□ -1.06
C11orf88-204ENST00000529661 GNB5O14775 395 aa8.45□□□□□ -1.06
C11orf88-204ENST00000529661 MAP3K6O95382 1288 aa8.45□□□□□ -1.06
C11orf88-204ENST00000529661 EGFRP00533 1210 aa8.45□□□□□ -1.06
C11orf88-204ENST00000529661 ALBP02768 609 aa8.45□□□□□ -1.06
C11orf88-204ENST00000529661 MLLT1Q03111 559 aaPredicted RBP8.45□□□□□ -1.06
C11orf88-204ENST00000529661 ZNF211Q13398 564 aaPredicted RBP8.45□□□□□ -1.06
C11orf88-204ENST00000529661 ZNF417Q8TAU3 575 aa8.45□□□□□ -1.06
C11orf88-204ENST00000529661 ZNF587Q96SQ5 575 aaPredicted RBP8.45□□□□□ -1.06
C11orf88-204ENST00000529661 STARD13Q9Y3M8 1113 aa8.45□□□□□ -1.06
C11orf88-204ENST00000529661 PIK3R2O00459 728 aa8.44□□□□□ -1.06
C11orf88-204ENST00000529661 ITGB2P05107 769 aa8.44□□□□□ -1.06
C11orf88-204ENST00000529661 PDE4CQ08493 712 aa8.44□□□□□ -1.06
C11orf88-204ENST00000529661 AAMPQ13685 434 aa8.44□□□□□ -1.06
C11orf88-204ENST00000529661 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
C11orf88-204ENST00000529661 CPB1P15086 417 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 COL8A1P27658 744 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 ARID4AP29374 1257 aaPredicted RBP8.43□□□□□ -1.06
C11orf88-204ENST00000529661 EIF1AXP47813 144 aaKnown RBP8.43□□□□□ -1.06
C11orf88-204ENST00000529661 DNM1Q05193 864 aaKnown RBP8.43□□□□□ -1.06
C11orf88-204ENST00000529661 GPAT2Q6NUI2 795 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 C8orf86Q6ZUL3 223 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 FAM35AQ86V20 835 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 NUDT8Q8WV74 236 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 SUV39H2Q9H5I1 410 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 NAGPAQ9UK23 515 aa8.43□□□□□ -1.06
C11orf88-204ENST00000529661 FNDC3AQ9Y2H6 1198 aaKnown RBP8.43□□□□□ -1.06
C11orf88-204ENST00000529661 MMP20O60882 483 aa8.42□□□□□ -1.06
C11orf88-204ENST00000529661 SERPINB4P48594 390 aa8.42□□□□□ -1.06
C11orf88-204ENST00000529661 PCSK7Q16549 785 aa8.42□□□□□ -1.06
C11orf88-204ENST00000529661 PSAPL1Q6NUJ1 521 aa8.42□□□□□ -1.06
C11orf88-204ENST00000529661 NLRP13Q86W25 1043 aa8.42□□□□□ -1.06
C11orf88-204ENST00000529661 MICALL1Q8N3F8 863 aa8.42□□□□□ -1.06
C11orf88-204ENST00000529661 EDEM1Q92611 657 aa8.42□□□□□ -1.06
C11orf88-204ENST00000529661 NUDT16Q96DE0 195 aaKnown RBP8.42□□□□□ -1.06
C11orf88-204ENST00000529661 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
C11orf88-204ENST00000529661 PSAPP07602 524 aa8.41□□□□□ -1.06
C11orf88-204ENST00000529661 PDIA4P13667 645 aaKnown RBP8.41□□□□□ -1.06
C11orf88-204ENST00000529661 PCSK2P16519 638 aa8.41□□□□□ -1.06
C11orf88-204ENST00000529661 GPLD1P80108 840 aa8.41□□□□□ -1.06
C11orf88-204ENST00000529661 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
C11orf88-204ENST00000529661 PLA2G4EQ3MJ16 856 aa8.41□□□□□ -1.06
C11orf88-204ENST00000529661 HFE2Q6ZVN8 426 aa8.41□□□□□ -1.06
C11orf88-204ENST00000529661 TRPM4Q8TD43 1214 aa8.41□□□□□ -1.06
C11orf88-204ENST00000529661 TRIM11Q96F44 468 aa8.41□□□□□ -1.06
C11orf88-204ENST00000529661 NSUN5Q96P11 429 aaKnown RBP8.41□□□□□ -1.06
C11orf88-204ENST00000529661 JPH1Q9HDC5 661 aaPredicted RBP8.41□□□□□ -1.06
C11orf88-204ENST00000529661 NOP53Q9NZM5 478 aaKnown RBP8.41□□□□□ -1.06
C11orf88-204ENST00000529661 ZBTB42B2RXF5 422 aa8.4□□□□□ -1.06
C11orf88-204ENST00000529661 LILRB5O75023 590 aa8.4□□□□□ -1.06
C11orf88-204ENST00000529661 FAM13AO94988 1023 aa8.4□□□□□ -1.06
C11orf88-204ENST00000529661 FKBP4Q02790 459 aaKnown RBP eCLIP8.4□□□□□ -1.06
C11orf88-204ENST00000529661 ALKBH2Q6NS38 261 aa8.4□□□□□ -1.06
C11orf88-204ENST00000529661 C20orf204Q6ZNR8 217 aa8.4□□□□□ -1.06
C11orf88-204ENST00000529661 TTC16Q8NEE8 873 aa8.4□□□□□ -1.06
C11orf88-204ENST00000529661 PLVAPQ9BX97 442 aa8.4□□□□□ -1.06
C11orf88-204ENST00000529661 RGS9O75916 674 aaPredicted RBP8.39□□□□□ -1.07
C11orf88-204ENST00000529661 PDGFAP04085 211 aa8.39□□□□□ -1.07
C11orf88-204ENST00000529661 EIF2AK2P19525 551 aaKnown RBP8.39□□□□□ -1.07
C11orf88-204ENST00000529661 NRLP54845 237 aa8.39□□□□□ -1.07
C11orf88-204ENST00000529661 PLAURQ03405 335 aa8.39□□□□□ -1.07
C11orf88-204ENST00000529661 TRIM26Q12899 539 aaPredicted RBP8.39□□□□□ -1.07
C11orf88-204ENST00000529661 C8orf34Q49A92 452 aa8.39□□□□□ -1.07
C11orf88-204ENST00000529661 KRBA1A5PL33 1030 aa8.38□□□□□ -1.07
C11orf88-204ENST00000529661 H3BRB1 525 aa8.38□□□□□ -1.07
C11orf88-204ENST00000529661 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
C11orf88-204ENST00000529661 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
C11orf88-204ENST00000529661 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
C11orf88-204ENST00000529661 ELMSAN1Q6PJG2 1045 aa8.38□□□□□ -1.07
C11orf88-204ENST00000529661 ZNF438Q7Z4V0 828 aa8.38□□□□□ -1.07
C11orf88-204ENST00000529661 GLYCTKQ8IVS8 523 aa8.38□□□□□ -1.07
C11orf88-204ENST00000529661 TUT1Q9H6E5 874 aaKnown RBP8.38□□□□□ -1.07
C11orf88-204ENST00000529661 PRDM6Q9NQX0 595 aa8.38□□□□□ -1.07
C11orf88-204ENST00000529661 J3QW42 95 aa8.37□□□□□ -1.07
C11orf88-204ENST00000529661 IGHA1P01876 353 aa8.37□□□□□ -1.07
C11orf88-204ENST00000529661 NPR3P17342 541 aa8.37□□□□□ -1.07
C11orf88-204ENST00000529661 ELP3Q9H9T3 547 aa8.37□□□□□ -1.07
C11orf88-204ENST00000529661 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
C11orf88-204ENST00000529661 POLIQ9UNA4 740 aa8.37□□□□□ -1.07
C11orf88-204ENST00000529661 LOC102724428A0A0B4J2F2 783 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 A6NHS1 94 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 ICMTO60725 284 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 RPLP1P05386 114 aaKnown RBP8.36□□□□□ -1.07
C11orf88-204ENST00000529661 SOX18P35713 384 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 SIK1P57059 783 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 PDE12Q6L8Q7 609 aaKnown RBP8.36□□□□□ -1.07
C11orf88-204ENST00000529661 LPIN3Q9BQK8 851 aa8.36□□□□□ -1.07
C11orf88-204ENST00000529661 TRAIPQ9BWF2 469 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms