RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
HIF3A-212ENST00000529205 PGAP2Q9UHJ9 254 aa17.76■□□□□ 0.43
HIF3A-212ENST00000529205 TSPYL4Q9UJ04 414 aa17.76■□□□□ 0.43
HIF3A-212ENST00000529205 TSKSQ9UJT2 592 aa17.76■□□□□ 0.43
HIF3A-212ENST00000529205 KDM3BQ7LBC6 1761 aa17.76■□□□□ 0.43
HIF3A-212ENST00000529205 TRPM7Q96QT4 1865 aa17.75■□□□□ 0.43
HIF3A-212ENST00000529205 RGS19P49795 217 aa17.75■□□□□ 0.43
HIF3A-212ENST00000529205 KIAA2012Q0VF49 1180 aa17.75■□□□□ 0.43
HIF3A-212ENST00000529205 GLIS2Q9BZE0 524 aaPredicted RBP17.75■□□□□ 0.43
HIF3A-212ENST00000529205 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
HIF3A-212ENST00000529205 PLEKHF1Q96S99 279 aa17.74■□□□□ 0.43
HIF3A-212ENST00000529205 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
HIF3A-212ENST00000529205 RAD17O75943 681 aa17.73■□□□□ 0.43
HIF3A-212ENST00000529205 NOGQ13253 232 aa17.73■□□□□ 0.43
HIF3A-212ENST00000529205 CNOT7Q9UIV1 285 aaKnown RBP17.73■□□□□ 0.43
HIF3A-212ENST00000529205 GRAPQ13588 217 aa17.72■□□□□ 0.43
HIF3A-212ENST00000529205 SLC51AQ86UW1 340 aa17.72■□□□□ 0.43
HIF3A-212ENST00000529205 GRAPLQ8TC17 118 aaPredicted RBP17.72■□□□□ 0.43
HIF3A-212ENST00000529205 MCOLN1Q9GZU1 580 aa17.72■□□□□ 0.43
HIF3A-212ENST00000529205 BABAM1Q9NWV8 329 aa17.72■□□□□ 0.43
HIF3A-212ENST00000529205 TRMT112Q9UI30 125 aaKnown RBP17.72■□□□□ 0.43
HIF3A-212ENST00000529205 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.43
HIF3A-212ENST00000529205 DGKZQ13574 1117 aa17.71■□□□□ 0.43
HIF3A-212ENST00000529205 SH3TC1Q8TE82 1336 aa17.71■□□□□ 0.42
HIF3A-212ENST00000529205 HCLS1P14317 486 aaPredicted RBP17.7■□□□□ 0.42
HIF3A-212ENST00000529205 HIRAP54198 1017 aaPredicted RBP17.7■□□□□ 0.42
HIF3A-212ENST00000529205 PDIA6Q15084 440 aa17.7■□□□□ 0.42
HIF3A-212ENST00000529205 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
HIF3A-212ENST00000529205 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
HIF3A-212ENST00000529205 DLG5Q8TDM6 1919 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 HUNKP57058 714 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 LMOD3Q0VAK6 560 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 TCIRG1Q13488 830 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 WASHC4Q2M389 1173 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 USP48Q86UV5 1035 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 MICALL2Q8IY33 904 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 DPF2Q92785 391 aa17.69■□□□□ 0.42
HIF3A-212ENST00000529205 RIPK4P57078 832 aa17.68■□□□□ 0.42
HIF3A-212ENST00000529205 LRP10Q7Z4F1 713 aa17.68■□□□□ 0.42
HIF3A-212ENST00000529205 C2orf69Q8N8R5 385 aa17.68■□□□□ 0.42
HIF3A-212ENST00000529205 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
HIF3A-212ENST00000529205 DCPSQ96C86 337 aaKnown RBP17.68■□□□□ 0.42
HIF3A-212ENST00000529205 ANXA1P04083 346 aa17.67■□□□□ 0.42
HIF3A-212ENST00000529205 XAGE3Q8WTP9 111 aa17.67■□□□□ 0.42
HIF3A-212ENST00000529205 CCDC102AQ96A19 550 aa17.67■□□□□ 0.42
HIF3A-212ENST00000529205 NSFL1CQ9UNZ2 370 aaKnown RBP17.67■□□□□ 0.42
HIF3A-212ENST00000529205 RPS12P25398 132 aaKnown RBP17.66■□□□□ 0.42
HIF3A-212ENST00000529205 PROSER3Q2NL68 480 aa17.66■□□□□ 0.42
HIF3A-212ENST00000529205 RGMBQ6NW40 437 aa17.66■□□□□ 0.42
HIF3A-212ENST00000529205 NECTIN2Q92692 538 aa17.66■□□□□ 0.42
HIF3A-212ENST00000529205 EYA3Q99504 573 aa17.66■□□□□ 0.42
HIF3A-212ENST00000529205 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
HIF3A-212ENST00000529205 YDJCA8MPS7 323 aa17.65■□□□□ 0.42
HIF3A-212ENST00000529205 C6orf229H3BNL8 230 aa17.65■□□□□ 0.42
HIF3A-212ENST00000529205 KRT26Q7Z3Y9 468 aa17.65■□□□□ 0.42
HIF3A-212ENST00000529205 PSMD14O00487 310 aa17.64■□□□□ 0.41
HIF3A-212ENST00000529205 TBC1D10BQ4KMP7 808 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-212ENST00000529205 SAMD7Q7Z3H4 446 aa17.64■□□□□ 0.41
HIF3A-212ENST00000529205 GBA2Q9HCG7 927 aaPredicted RBP17.64■□□□□ 0.41
HIF3A-212ENST00000529205 SAGE1Q9NXZ1 904 aa17.64■□□□□ 0.41
HIF3A-212ENST00000529205 ANKRD36CQ5JPF3 1778 aa17.63■□□□□ 0.41
HIF3A-212ENST00000529205 G3V3G9 751 aa17.63■□□□□ 0.41
HIF3A-212ENST00000529205 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
HIF3A-212ENST00000529205 ZNF157P51786 506 aaPredicted RBP17.63■□□□□ 0.41
HIF3A-212ENST00000529205 RBM26Q5T8P6 1007 aaKnown RBP17.63■□□□□ 0.41
HIF3A-212ENST00000529205 DCAF8Q5TAQ9 597 aa17.63■□□□□ 0.41
HIF3A-212ENST00000529205 DBNDD1Q9H9R9 158 aa17.63■□□□□ 0.41
HIF3A-212ENST00000529205 PCDH10Q9P2E7 1040 aa17.63■□□□□ 0.41
HIF3A-212ENST00000529205 SHTN1A0MZ66 631 aa17.62■□□□□ 0.41
HIF3A-212ENST00000529205 SULF1Q8IWU6 871 aa17.62■□□□□ 0.41
HIF3A-212ENST00000529205 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
HIF3A-212ENST00000529205 KIF23Q02241 960 aaPredicted RBP17.61■□□□□ 0.41
HIF3A-212ENST00000529205 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
HIF3A-212ENST00000529205 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
HIF3A-212ENST00000529205 ZC3H12CQ9C0D7 883 aaKnown RBP17.61■□□□□ 0.41
HIF3A-212ENST00000529205 ECE2O60344 883 aa17.6■□□□□ 0.41
HIF3A-212ENST00000529205 HSP90B1P14625 803 aaKnown RBP17.6■□□□□ 0.41
HIF3A-212ENST00000529205 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
HIF3A-212ENST00000529205 REM2Q8IYK8 340 aaPredicted RBP17.6■□□□□ 0.41
HIF3A-212ENST00000529205 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
HIF3A-212ENST00000529205 FAM89AQ96GI7 184 aa17.6■□□□□ 0.41
HIF3A-212ENST00000529205 ZIC5Q96T25 663 aa17.6■□□□□ 0.41
HIF3A-212ENST00000529205 LAS1LQ9Y4W2 734 aaKnown RBP17.6■□□□□ 0.41
HIF3A-212ENST00000529205 LAMB2P55268 1798 aa17.6■□□□□ 0.41
HIF3A-212ENST00000529205 FAM155AB1AL88 458 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-212ENST00000529205 GPSM2P81274 684 aa17.59■□□□□ 0.41
HIF3A-212ENST00000529205 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
HIF3A-212ENST00000529205 KIF4BQ2VIQ3 1234 aa17.59■□□□□ 0.41
HIF3A-212ENST00000529205 CHPF2Q9P2E5 772 aa17.59■□□□□ 0.41
HIF3A-212ENST00000529205 DBF4Q9UBU7 674 aaPredicted RBP17.59■□□□□ 0.41
HIF3A-212ENST00000529205 ADM5C9JUS6 153 aa17.58■□□□□ 0.4
HIF3A-212ENST00000529205 TRPA1O75762 1119 aa17.58■□□□□ 0.4
HIF3A-212ENST00000529205 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
HIF3A-212ENST00000529205 HDGFL1Q5TGJ6 251 aa17.58■□□□□ 0.4
HIF3A-212ENST00000529205 POLLQ9UGP5 575 aa17.58■□□□□ 0.4
HIF3A-212ENST00000529205 CASP8AP2Q9UKL3 1982 aa17.58■□□□□ 0.4
HIF3A-212ENST00000529205 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
HIF3A-212ENST00000529205 DLK2Q6UY11 383 aa17.57■□□□□ 0.4
HIF3A-212ENST00000529205 TBC1D16Q8TBP0 767 aa17.57■□□□□ 0.4
HIF3A-212ENST00000529205 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms