RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 MEIS3Q99687 375 aa14.48□□□□□ -0.09
USF1-208ENST00000528768 SLC52A2Q9HAB3 445 aa14.48□□□□□ -0.09
USF1-208ENST00000528768 BCL2L12Q9HB09 334 aa14.48□□□□□ -0.09
USF1-208ENST00000528768 WDR33Q9C0J8 1336 aaKnown RBP14.47□□□□□ -0.09
USF1-208ENST00000528768 CCDC85CA6NKD9 419 aa14.47□□□□□ -0.09
USF1-208ENST00000528768 EIF4A1P60842 406 aaKnown RBP14.47□□□□□ -0.09
USF1-208ENST00000528768 STYK1Q6J9G0 422 aa14.47□□□□□ -0.09
USF1-208ENST00000528768 HACL1Q9UJ83 578 aa14.47□□□□□ -0.09
USF1-208ENST00000528768 CARMIL3Q8ND23 1372 aa14.47□□□□□ -0.09
USF1-208ENST00000528768 ECE1P42892 770 aa14.46□□□□□ -0.09
USF1-208ENST00000528768 CLEC11AQ9Y240 323 aa14.46□□□□□ -0.09
USF1-208ENST00000528768 ZBTB1Q9Y2K1 713 aa14.46□□□□□ -0.09
USF1-208ENST00000528768 SCN11AQ9UI33 1791 aa14.45□□□□□ -0.1
USF1-208ENST00000528768 F6X3S4 739 aa14.45□□□□□ -0.1
USF1-208ENST00000528768 STARD3NLO95772 234 aa14.45□□□□□ -0.1
USF1-208ENST00000528768 SLC4A3P48751 1232 aa14.45□□□□□ -0.1
USF1-208ENST00000528768 EAPPQ56P03 285 aaPredicted RBP14.45□□□□□ -0.1
USF1-208ENST00000528768 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
USF1-208ENST00000528768 SRCIN1Q9C0H9 1055 aa14.45□□□□□ -0.1
USF1-208ENST00000528768 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
USF1-208ENST00000528768 RBM25P49756 843 aaKnown RBP14.44□□□□□ -0.1
USF1-208ENST00000528768 EIF5P55010 431 aaKnown RBP14.44□□□□□ -0.1
USF1-208ENST00000528768 ATP8B2P98198 1209 aa14.44□□□□□ -0.1
USF1-208ENST00000528768 PRR5LQ6MZQ0 368 aa14.44□□□□□ -0.1
USF1-208ENST00000528768 BICDL1Q6ZP65 573 aa14.44□□□□□ -0.1
USF1-208ENST00000528768 PLEKHM2Q8IWE5 1019 aa14.44□□□□□ -0.1
USF1-208ENST00000528768 CNTROBQ8N137 903 aa14.44□□□□□ -0.1
USF1-208ENST00000528768 MASTLQ96GX5 879 aa14.44□□□□□ -0.1
USF1-208ENST00000528768 LGR6Q9HBX8 967 aa14.44□□□□□ -0.1
USF1-208ENST00000528768 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
USF1-208ENST00000528768 DBF4Q9UBU7 674 aaPredicted RBP14.44□□□□□ -0.1
USF1-208ENST00000528768 CA12O43570 354 aa14.43□□□□□ -0.1
USF1-208ENST00000528768 EIF2S2P20042 333 aaKnown RBP14.43□□□□□ -0.1
USF1-208ENST00000528768 EPHX2P34913 555 aa14.43□□□□□ -0.1
USF1-208ENST00000528768 ST5P78524 1137 aa14.43□□□□□ -0.1
USF1-208ENST00000528768 TTC22Q5TAA0 569 aa14.43□□□□□ -0.1
USF1-208ENST00000528768 PRPF40BQ6NWY9 871 aaKnown RBP14.43□□□□□ -0.1
USF1-208ENST00000528768 NECTIN2Q92692 538 aa14.43□□□□□ -0.1
USF1-208ENST00000528768 TEX13AQ9BXU3 409 aaPredicted RBP14.43□□□□□ -0.1
USF1-208ENST00000528768 ABT1Q9ULW3 272 aaKnown RBP14.43□□□□□ -0.1
USF1-208ENST00000528768 MRC1P22897 1456 aa14.43□□□□□ -0.1
USF1-208ENST00000528768 ANKRD31Q8N7Z5 1873 aa14.42□□□□□ -0.1
USF1-208ENST00000528768 NPHP1O15259 732 aa14.42□□□□□ -0.1
USF1-208ENST00000528768 DDX58O95786 925 aaKnown RBP14.42□□□□□ -0.1
USF1-208ENST00000528768 SRGNP10124 158 aa14.42□□□□□ -0.1
USF1-208ENST00000528768 CCDC93Q567U6 631 aa14.42□□□□□ -0.1
USF1-208ENST00000528768 CNBD1Q8NA66 436 aa14.42□□□□□ -0.1
USF1-208ENST00000528768 KDM3BQ7LBC6 1761 aa14.42□□□□□ -0.1
USF1-208ENST00000528768 ADAMTSL1Q8N6G6 1762 aa14.42□□□□□ -0.1
USF1-208ENST00000528768 RAB11FIP3O75154 756 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 FKBP4Q02790 459 aaKnown RBP eCLIP14.41□□□□□ -0.1
USF1-208ENST00000528768 HSP90AB4PQ58FF6 505 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 TBC1D9BQ66K14 1250 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 DNAAF4Q8WXU2 420 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 SETDB2Q96T68 719 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 LRRCC1Q9C099 1032 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 HYPKQ9NX55 129 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 ARFGEF2Q9Y6D5 1785 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 THSD7BQ9C0I4 1608 aa14.41□□□□□ -0.1
USF1-208ENST00000528768 MAP2K2P36507 400 aa14.4□□□□□ -0.1
USF1-208ENST00000528768 TBC1D9Q6ZT07 1266 aa14.4□□□□□ -0.1
USF1-208ENST00000528768 RTKN2Q8IZC4 609 aa14.4□□□□□ -0.1
USF1-208ENST00000528768 SNX21Q969T3 373 aa14.4□□□□□ -0.1
USF1-208ENST00000528768 TBC1D2Q9BYX2 928 aa14.4□□□□□ -0.1
USF1-208ENST00000528768 COL11A2P13942 1736 aaPredicted RBP14.4□□□□□ -0.1
USF1-208ENST00000528768 ALDH1L1O75891 902 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 IL6STP40189 918 aaPredicted RBP14.39□□□□□ -0.11
USF1-208ENST00000528768 SLC39A6Q13433 755 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 NFKBIBQ15653 356 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 TTC5Q8N0Z6 440 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 GPC2Q8N158 579 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 CAPNS2Q96L46 248 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 GPR101Q96P66 508 aaPredicted RBP14.39□□□□□ -0.11
USF1-208ENST00000528768 OSBPL3Q9H4L5 887 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 DDX21Q9NR30 783 aaKnown RBP eCLIP14.39□□□□□ -0.11
USF1-208ENST00000528768 CHPF2Q9P2E5 772 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 SCN7AQ01118 1682 aa14.39□□□□□ -0.11
USF1-208ENST00000528768 REC8O95072 547 aa14.38□□□□□ -0.11
USF1-208ENST00000528768 MAP1SQ66K74 1059 aaPredicted RBP14.38□□□□□ -0.11
USF1-208ENST00000528768 C7orf43Q8WVR3 580 aa14.38□□□□□ -0.11
USF1-208ENST00000528768 SLX4Q8IY92 1834 aa14.38□□□□□ -0.11
USF1-208ENST00000528768 FZD9O00144 591 aa14.37□□□□□ -0.11
USF1-208ENST00000528768 APBB1O00213 710 aa14.37□□□□□ -0.11
USF1-208ENST00000528768 NPR1P16066 1061 aa14.37□□□□□ -0.11
USF1-208ENST00000528768 USP44Q9H0E7 712 aa14.37□□□□□ -0.11
USF1-208ENST00000528768 PHAXQ9H814 394 aaKnown RBP14.37□□□□□ -0.11
USF1-208ENST00000528768 LRRFIP2Q9Y608 721 aaKnown RBP14.37□□□□□ -0.11
USF1-208ENST00000528768 AOX1Q06278 1338 aa14.37□□□□□ -0.11
USF1-208ENST00000528768 ZNF541Q9H0D2 1346 aa14.37□□□□□ -0.11
USF1-208ENST00000528768 LMOD1P29536 600 aaPredicted RBP14.36□□□□□ -0.11
USF1-208ENST00000528768 DEKP35659 375 aaKnown RBP14.36□□□□□ -0.11
USF1-208ENST00000528768 KSR2Q6VAB6 950 aa14.36□□□□□ -0.11
USF1-208ENST00000528768 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
USF1-208ENST00000528768 JDP2Q8WYK2 163 aa14.36□□□□□ -0.11
USF1-208ENST00000528768 PDE4DIPQ5VU43 2346 aa14.36□□□□□ -0.11
USF1-208ENST00000528768 IBTKQ9P2D0 1353 aaPredicted RBP14.35□□□□□ -0.11
USF1-208ENST00000528768 HEG1Q9ULI3 1381 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 UBR2Q8IWV8 1755 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 PI4KAP2A4QPH2 592 aa14.35□□□□□ -0.11
USF1-208ENST00000528768 GSPT1P15170 499 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms