RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 C10orf71Q711Q0 1435 aa27.48■■□□□ 1.99
PACSIN3-205ENST00000528462 CCDC152Q4G0S7 254 aa27.48■■□□□ 1.99
PACSIN3-205ENST00000528462 SIRT2Q8IXJ6 389 aa27.48■■□□□ 1.99
PACSIN3-205ENST00000528462 PDE6BP35913 854 aa27.46■■□□□ 1.99
PACSIN3-205ENST00000528462 POLA2Q14181 598 aa27.46■■□□□ 1.99
PACSIN3-205ENST00000528462 C3orf67Q6ZVT6 689 aa27.46■■□□□ 1.99
PACSIN3-205ENST00000528462 SSH3Q8TE77 659 aa27.46■■□□□ 1.99
PACSIN3-205ENST00000528462 PNMA6EA0A0J9YXQ4 647 aa27.45■■□□□ 1.99
PACSIN3-205ENST00000528462 SRGAP3O43295 1099 aa27.45■■□□□ 1.99
PACSIN3-205ENST00000528462 PDZRN3Q9UPQ7 1066 aa27.45■■□□□ 1.99
PACSIN3-205ENST00000528462 TNRC6CQ9HCJ0 1690 aaKnown RBP27.45■■□□□ 1.98
PACSIN3-205ENST00000528462 HMMRO75330 724 aa27.44■■□□□ 1.98
PACSIN3-205ENST00000528462 HDAC1Q13547 482 aaPredicted RBP27.44■■□□□ 1.98
PACSIN3-205ENST00000528462 ANKRD31Q8N7Z5 1873 aa27.44■■□□□ 1.98
PACSIN3-205ENST00000528462 FAM161AQ3B820 660 aa27.43■■□□□ 1.98
PACSIN3-205ENST00000528462 GREM2Q9H772 168 aa27.43■■□□□ 1.98
PACSIN3-205ENST00000528462 ITGA6P23229 1130 aa27.41■■□□□ 1.98
PACSIN3-205ENST00000528462 HOXA10P31260 410 aaPredicted RBP27.41■■□□□ 1.98
PACSIN3-205ENST00000528462 RFX5P48382 616 aaPredicted RBP27.41■■□□□ 1.98
PACSIN3-205ENST00000528462 IFIT5Q13325 482 aaKnown RBP27.41■■□□□ 1.98
PACSIN3-205ENST00000528462 CCDC57Q2TAC2 916 aa27.41■■□□□ 1.98
PACSIN3-205ENST00000528462 PPP4R2Q9NY27 417 aa27.41■■□□□ 1.98
PACSIN3-205ENST00000528462 KIF13BQ9NQT8 1826 aa27.41■■□□□ 1.98
PACSIN3-205ENST00000528462 SRGNP10124 158 aa27.4■■□□□ 1.98
PACSIN3-205ENST00000528462 CHMP3Q9Y3E7 222 aa27.4■■□□□ 1.98
PACSIN3-205ENST00000528462 RWDD1Q9H446 243 aaPredicted RBP27.39■■□□□ 1.98
PACSIN3-205ENST00000528462 COPRSQ9NQ92 184 aa27.39■■□□□ 1.98
PACSIN3-205ENST00000528462 ANKRD18BA2A2Z9 1011 aa27.39■■□□□ 1.97
PACSIN3-205ENST00000528462 CD2APQ9Y5K6 639 aa27.39■■□□□ 1.97
PACSIN3-205ENST00000528462 PTPN12Q05209 780 aaKnown RBP27.38■■□□□ 1.97
PACSIN3-205ENST00000528462 CCDC85AQ96PX6 553 aaPredicted RBP27.38■■□□□ 1.97
PACSIN3-205ENST00000528462 NPR1P16066 1061 aa27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 TGFB2P61812 414 aa27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 DDX46Q7L014 1031 aaKnown RBP27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 RPGRQ92834 1020 aaKnown RBP27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 CRAMP1Q96RY5 1269 aa27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 CDC5LQ99459 802 aaKnown RBP27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 FBXO3Q9UK99 471 aa27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 NOP58Q9Y2X3 529 aaKnown RBP27.37■■□□□ 1.97
PACSIN3-205ENST00000528462 SEC31BQ9NQW1 1179 aa27.36■■□□□ 1.97
PACSIN3-205ENST00000528462 SRCAPQ6ZRS2 3230 aa27.36■■□□□ 1.97
PACSIN3-205ENST00000528462 H0YIN7 160 aa27.35■■□□□ 1.97
PACSIN3-205ENST00000528462 MASTLQ96GX5 879 aa27.35■■□□□ 1.97
PACSIN3-205ENST00000528462 RBM17Q96I25 401 aaKnown RBP27.35■■□□□ 1.97
PACSIN3-205ENST00000528462 GTF3C3Q9Y5Q9 886 aa27.35■■□□□ 1.97
PACSIN3-205ENST00000528462 DCTPP1Q9H773 170 aa27.35■■□□□ 1.97
PACSIN3-205ENST00000528462 IGHDP01880 384 aa27.34■■□□□ 1.97
PACSIN3-205ENST00000528462 STYK1Q6J9G0 422 aa27.34■■□□□ 1.97
PACSIN3-205ENST00000528462 C2CD5Q86YS7 1000 aa27.34■■□□□ 1.97
PACSIN3-205ENST00000528462 CCDC136Q96JN2 1154 aa27.34■■□□□ 1.97
PACSIN3-205ENST00000528462 GRAPQ13588 217 aa27.33■■□□□ 1.97
PACSIN3-205ENST00000528462 GRAPLQ8TC17 118 aaPredicted RBP27.33■■□□□ 1.97
PACSIN3-205ENST00000528462 CIAO1O76071 339 aa27.32■■□□□ 1.96
PACSIN3-205ENST00000528462 ALDH1B1P30837 517 aa27.32■■□□□ 1.96
PACSIN3-205ENST00000528462 RPS8P62241 208 aaKnown RBP27.32■■□□□ 1.96
PACSIN3-205ENST00000528462 COL11A2P13942 1736 aaPredicted RBP27.32■■□□□ 1.96
PACSIN3-205ENST00000528462 LRP5O75197 1615 aa27.32■■□□□ 1.96
PACSIN3-205ENST00000528462 HSP90AB4PQ58FF6 505 aa27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 TAF7LQ5H9L4 462 aa27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 ANKRD18AQ8IVF6 992 aa27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 KLHDC4Q8TBB5 520 aa27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 PA2G4Q9UQ80 394 aaKnown RBP27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 BBOX1O75936 387 aa27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 IGHMBP2P38935 993 aaKnown RBP27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 SMC5Q8IY18 1101 aa27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 CELF1Q92879 486 aaKnown RBP27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 GCC1Q96CN9 775 aa27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 BSDC1Q9NW68 430 aaPredicted RBP27.31■■□□□ 1.96
PACSIN3-205ENST00000528462 SURF6O75683 361 aaKnown RBP27.3■■□□□ 1.96
PACSIN3-205ENST00000528462 ZNF594Q96JF6 807 aaPredicted RBP27.3■■□□□ 1.96
PACSIN3-205ENST00000528462 EYA2O00167 538 aa27.29■■□□□ 1.96
PACSIN3-205ENST00000528462 CHRNA5P30532 468 aa27.29■■□□□ 1.96
PACSIN3-205ENST00000528462 LDHAL6AQ6ZMR3 332 aa27.29■■□□□ 1.96
PACSIN3-205ENST00000528462 TMC4Q7Z404 712 aa27.29■■□□□ 1.96
PACSIN3-205ENST00000528462 MPHOSPH8Q99549 860 aa27.29■■□□□ 1.96
PACSIN3-205ENST00000528462 KDM2BQ8NHM5 1336 aa27.29■■□□□ 1.96
PACSIN3-205ENST00000528462 KCNA3P22001 575 aa27.28■■□□□ 1.96
PACSIN3-205ENST00000528462 CNKSR1Q969H4 720 aa27.28■■□□□ 1.96
PACSIN3-205ENST00000528462 RIPOR2Q9Y4F9 1068 aa27.28■■□□□ 1.96
PACSIN3-205ENST00000528462 DLEC1Q9Y238 1755 aa27.28■■□□□ 1.96
PACSIN3-205ENST00000528462 RAB11FIP3O75154 756 aa27.27■■□□□ 1.96
PACSIN3-205ENST00000528462 ATG9AQ7Z3C6 839 aa27.27■■□□□ 1.96
PACSIN3-205ENST00000528462 KIAA1551Q9HCM1 1747 aa27.27■■□□□ 1.96
PACSIN3-205ENST00000528462 COL4A1P02462 1669 aa27.27■■□□□ 1.96
PACSIN3-205ENST00000528462 DPEP1P16444 411 aa27.26■■□□□ 1.96
PACSIN3-205ENST00000528462 IL15P40933 162 aaPredicted RBP27.26■■□□□ 1.96
PACSIN3-205ENST00000528462 G3BP1Q13283 466 aaKnown RBP eCLIP27.26■■□□□ 1.96
PACSIN3-205ENST00000528462 B4GALNT3Q6L9W6 998 aa27.26■■□□□ 1.96
PACSIN3-205ENST00000528462 CENPQQ7L2Z9 268 aaPredicted RBP27.26■■□□□ 1.96
PACSIN3-205ENST00000528462 EXOC6BQ9Y2D4 811 aa27.26■■□□□ 1.96
PACSIN3-205ENST00000528462 ERC1Q8IUD2 1116 aa27.26■■□□□ 1.95
PACSIN3-205ENST00000528462 ZNF622Q969S3 477 aaKnown RBP eCLIP27.26■■□□□ 1.95
PACSIN3-205ENST00000528462 SIL1Q9H173 461 aa27.26■■□□□ 1.95
PACSIN3-205ENST00000528462 A0A0G2JLW4 131 aa27.25■■□□□ 1.95
PACSIN3-205ENST00000528462 PUS3Q9BZE2 481 aaKnown RBP27.25■■□□□ 1.95
PACSIN3-205ENST00000528462 CNNM1Q9NRU3 951 aa27.25■■□□□ 1.95
PACSIN3-205ENST00000528462 PPP1R1BQ9UD71 204 aaPredicted RBP27.25■■□□□ 1.95
PACSIN3-205ENST00000528462 TAF1P21675 1872 aa27.24■■□□□ 1.95
PACSIN3-205ENST00000528462 LRRC24Q50LG9 513 aa27.24■■□□□ 1.95
PACSIN3-205ENST00000528462 MROH5Q6ZUA9 1318 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms