RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
CHD7-208ENST00000528280 CNTNAP1P78357 1384 aa12.31□□□□□ -0.44
CHD7-208ENST00000528280 SLC4A2P04920 1241 aa12.31□□□□□ -0.44
CHD7-208ENST00000528280 GRAPQ13588 217 aa12.31□□□□□ -0.44
CHD7-208ENST00000528280 TSPYL6Q8N831 410 aa12.31□□□□□ -0.44
CHD7-208ENST00000528280 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
CHD7-208ENST00000528280 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
CHD7-208ENST00000528280 METTL22Q9BUU2 404 aaPredicted RBP12.31□□□□□ -0.44
CHD7-208ENST00000528280 WBP1LQ9NX94 342 aa12.31□□□□□ -0.44
CHD7-208ENST00000528280 CWC25Q9NXE8 425 aaPredicted RBP12.31□□□□□ -0.44
CHD7-208ENST00000528280 PDE4DIPQ5VU43 2346 aa12.31□□□□□ -0.44
CHD7-208ENST00000528280 FZD9O00144 591 aa12.3□□□□□ -0.44
CHD7-208ENST00000528280 IRS4O14654 1257 aaPredicted RBP12.3□□□□□ -0.44
CHD7-208ENST00000528280 EIF6P56537 245 aaKnown RBP12.3□□□□□ -0.44
CHD7-208ENST00000528280 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
CHD7-208ENST00000528280 MYD88Q99836 296 aa12.3□□□□□ -0.44
CHD7-208ENST00000528280 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
CHD7-208ENST00000528280 TCERG1O14776 1098 aaKnown RBP12.29□□□□□ -0.44
CHD7-208ENST00000528280 DDNO94850 711 aaPredicted RBP12.29□□□□□ -0.44
CHD7-208ENST00000528280 PCCAP05165 728 aaPredicted RBP12.29□□□□□ -0.44
CHD7-208ENST00000528280 OLFM4Q6UX06 510 aa12.29□□□□□ -0.44
CHD7-208ENST00000528280 DPP8Q6V1X1 898 aaPredicted RBP12.29□□□□□ -0.44
CHD7-208ENST00000528280 GPC2Q8N158 579 aa12.29□□□□□ -0.44
CHD7-208ENST00000528280 LARGE2Q8N3Y3 721 aa12.29□□□□□ -0.44
CHD7-208ENST00000528280 MPNDQ8N594 471 aa12.29□□□□□ -0.44
CHD7-208ENST00000528280 L3MBTL3Q96JM7 780 aaPredicted RBP12.29□□□□□ -0.44
CHD7-208ENST00000528280 RTFDC1Q9BY42 306 aaPredicted RBP12.29□□□□□ -0.44
CHD7-208ENST00000528280 MAP3K2Q9Y2U5 619 aa12.29□□□□□ -0.44
CHD7-208ENST00000528280 ABCC4O15439 1325 aa12.29□□□□□ -0.44
CHD7-208ENST00000528280 PI4KAP2A4QPH2 592 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 CCDC85CA6NKD9 419 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 PDE8AO60658 829 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 VAMP4O75379 141 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 VEGFBP49765 207 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 PNMA8AQ86V59 439 aaPredicted RBP12.28□□□□□ -0.44
CHD7-208ENST00000528280 PI4KAP1Q8N8J0 262 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 ANKRD36CQ5JPF3 1778 aa12.28□□□□□ -0.44
CHD7-208ENST00000528280 HSPA8P11142 646 aaKnown RBP12.27□□□□□ -0.45
CHD7-208ENST00000528280 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
CHD7-208ENST00000528280 CCDC152Q4G0S7 254 aa12.27□□□□□ -0.45
CHD7-208ENST00000528280 NIM1KQ8IY84 436 aa12.27□□□□□ -0.45
CHD7-208ENST00000528280 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.45
CHD7-208ENST00000528280 CACNA1SQ13698 1873 aa12.27□□□□□ -0.45
CHD7-208ENST00000528280 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
CHD7-208ENST00000528280 PPIP5K2O43314 1243 aa12.26□□□□□ -0.45
CHD7-208ENST00000528280 EXOSC9Q06265 439 aaKnown RBP12.26□□□□□ -0.45
CHD7-208ENST00000528280 RTL5Q5HYW3 569 aaPredicted RBP12.26□□□□□ -0.45
CHD7-208ENST00000528280 HACL1Q9UJ83 578 aa12.26□□□□□ -0.45
CHD7-208ENST00000528280 ZNRF3Q9ULT6 936 aa12.26□□□□□ -0.45
CHD7-208ENST00000528280 LMOD1P29536 600 aaPredicted RBP12.25□□□□□ -0.45
CHD7-208ENST00000528280 FLIIQ13045 1269 aa12.25□□□□□ -0.45
CHD7-208ENST00000528280 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
CHD7-208ENST00000528280 TNIP1Q15025 636 aa12.25□□□□□ -0.45
CHD7-208ENST00000528280 EYA3Q99504 573 aa12.25□□□□□ -0.45
CHD7-208ENST00000528280 TAF1DQ9H5J8 278 aaPredicted RBP12.25□□□□□ -0.45
CHD7-208ENST00000528280 PASKQ96RG2 1323 aa12.25□□□□□ -0.45
CHD7-208ENST00000528280 CDHR2Q9BYE9 1310 aa12.25□□□□□ -0.45
CHD7-208ENST00000528280 SCN4AP35499 1836 aa12.24□□□□□ -0.45
CHD7-208ENST00000528280 KIAA2012Q0VF49 1180 aa12.24□□□□□ -0.45
CHD7-208ENST00000528280 LDHDQ86WU2 507 aa12.24□□□□□ -0.45
CHD7-208ENST00000528280 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
CHD7-208ENST00000528280 SNED1Q8TER0 1413 aa12.24□□□□□ -0.45
CHD7-208ENST00000528280 NSFL1CQ9UNZ2 370 aaKnown RBP12.24□□□□□ -0.45
CHD7-208ENST00000528280 NEURL1BA8MQ27 555 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 E9PSI1 815 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 H7C1W4 665 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 IGKV5-2P06315 115 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 EPHX2P34913 555 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 AOC3Q16853 763 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 WASHC4Q2M389 1173 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 ANKRD18AQ8IVF6 992 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 DNAAF4Q8WXU2 420 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 CELF1Q92879 486 aaKnown RBP12.23□□□□□ -0.45
CHD7-208ENST00000528280 ZNF428Q96B54 188 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
CHD7-208ENST00000528280 GJA3Q9Y6H8 435 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
CHD7-208ENST00000528280 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
CHD7-208ENST00000528280 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
CHD7-208ENST00000528280 GCKRQ14397 625 aa12.22□□□□□ -0.45
CHD7-208ENST00000528280 G2E3Q7L622 706 aa12.22□□□□□ -0.45
CHD7-208ENST00000528280 ZC3H12CQ9C0D7 883 aaKnown RBP12.22□□□□□ -0.45
CHD7-208ENST00000528280 PODXL2Q9NZ53 605 aa12.22□□□□□ -0.45
CHD7-208ENST00000528280 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
CHD7-208ENST00000528280 TMEM88BA6NKF7 163 aa12.21□□□□□ -0.45
CHD7-208ENST00000528280 G3V3G9 751 aa12.21□□□□□ -0.45
CHD7-208ENST00000528280 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
CHD7-208ENST00000528280 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
CHD7-208ENST00000528280 CIAPIN1Q6FI81 312 aa12.21□□□□□ -0.45
CHD7-208ENST00000528280 USP50Q70EL3 339 aaPredicted RBP12.21□□□□□ -0.45
CHD7-208ENST00000528280 TTLL11Q8NHH1 800 aa12.21□□□□□ -0.45
CHD7-208ENST00000528280 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
CHD7-208ENST00000528280 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
CHD7-208ENST00000528280 CASP8AP2Q9UKL3 1982 aa12.2□□□□□ -0.46
CHD7-208ENST00000528280 ITGBL1O95965 494 aaPredicted RBP12.2□□□□□ -0.46
CHD7-208ENST00000528280 CTSWP56202 376 aa12.2□□□□□ -0.46
CHD7-208ENST00000528280 CXCL9Q07325 125 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms