RNA–Protein interactions for RNA: ENST00000527821.2

SSH3-205, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-205ENST00000527821 GRAPLQ8TC17 118 aaPredicted RBP20.92■□□□□ 0.94
SSH3-205ENST00000527821 FRAT1Q92837 279 aaPredicted RBP20.92■□□□□ 0.94
SSH3-205ENST00000527821 TMX4Q9H1E5 349 aaPredicted RBP20.92■□□□□ 0.94
SSH3-205ENST00000527821 TAF1P21675 1872 aa20.92■□□□□ 0.94
SSH3-205ENST00000527821 MYH3P11055 1940 aa20.92■□□□□ 0.94
SSH3-205ENST00000527821 IPO8O15397 1037 aaKnown RBP20.91■□□□□ 0.94
SSH3-205ENST00000527821 BBOX1O75936 387 aa20.91■□□□□ 0.94
SSH3-205ENST00000527821 FER1L6Q2WGJ9 1857 aa20.91■□□□□ 0.94
SSH3-205ENST00000527821 OLFM4Q6UX06 510 aa20.91■□□□□ 0.94
SSH3-205ENST00000527821 CCDC85AQ96PX6 553 aaPredicted RBP20.91■□□□□ 0.94
SSH3-205ENST00000527821 NFKBIEO00221 500 aa20.9■□□□□ 0.94
SSH3-205ENST00000527821 CASP7P55210 303 aa20.9■□□□□ 0.94
SSH3-205ENST00000527821 ARHGAP45Q92619 1136 aa20.9■□□□□ 0.94
SSH3-205ENST00000527821 CC2D2BQ6DHV5 1058 aa20.89■□□□□ 0.93
SSH3-205ENST00000527821 RTKN2Q8IZC4 609 aa20.89■□□□□ 0.93
SSH3-205ENST00000527821 PLA2G12BQ9BX93 195 aa20.89■□□□□ 0.93
SSH3-205ENST00000527821 TAOK3Q9H2K8 898 aa20.89■□□□□ 0.93
SSH3-205ENST00000527821 SBF1O95248 1867 aa20.88■□□□□ 0.93
SSH3-205ENST00000527821 CCT4P50991 539 aaKnown RBP20.88■□□□□ 0.93
SSH3-205ENST00000527821 C9orf131Q5VYM1 1079 aa20.88■□□□□ 0.93
SSH3-205ENST00000527821 TTLL11Q8NHH1 800 aa20.88■□□□□ 0.93
SSH3-205ENST00000527821 CELF1Q92879 486 aaKnown RBP20.88■□□□□ 0.93
SSH3-205ENST00000527821 SEC31BQ9NQW1 1179 aa20.88■□□□□ 0.93
SSH3-205ENST00000527821 RNF181Q9P0P0 153 aa20.88■□□□□ 0.93
SSH3-205ENST00000527821 ATP6V0A2Q9Y487 856 aa20.88■□□□□ 0.93
SSH3-205ENST00000527821 LMNB1P20700 586 aa20.87■□□□□ 0.93
SSH3-205ENST00000527821 CCDC88AQ3V6T2 1871 aa20.87■□□□□ 0.93
SSH3-205ENST00000527821 LTBP3Q9NS15 1303 aa20.86■□□□□ 0.93
SSH3-205ENST00000527821 RPS8P62241 208 aaKnown RBP20.86■□□□□ 0.93
SSH3-205ENST00000527821 FKBP4Q02790 459 aaKnown RBP eCLIP20.86■□□□□ 0.93
SSH3-205ENST00000527821 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
SSH3-205ENST00000527821 ATF7IPQ6VMQ6 1270 aa20.86■□□□□ 0.93
SSH3-205ENST00000527821 TMC4Q7Z404 712 aa20.86■□□□□ 0.93
SSH3-205ENST00000527821 SLC51AQ86UW1 340 aa20.86■□□□□ 0.93
SSH3-205ENST00000527821 SP8Q8IXZ3 490 aa20.86■□□□□ 0.93
SSH3-205ENST00000527821 NBPF7P0C2Y1 421 aaPredicted RBP20.85■□□□□ 0.93
SSH3-205ENST00000527821 TRIM27P14373 513 aa20.85■□□□□ 0.93
SSH3-205ENST00000527821 PRELPP51888 382 aa20.85■□□□□ 0.93
SSH3-205ENST00000527821 ZKSCAN2Q63HK3 967 aa20.85■□□□□ 0.93
SSH3-205ENST00000527821 CDC5LQ99459 802 aaKnown RBP20.85■□□□□ 0.93
SSH3-205ENST00000527821 GREM2Q9H772 168 aa20.85■□□□□ 0.93
SSH3-205ENST00000527821 COL4A1P02462 1669 aa20.84■□□□□ 0.93
SSH3-205ENST00000527821 FOXO4P98177 505 aa20.84■□□□□ 0.93
SSH3-205ENST00000527821 ANKRD18AQ8IVF6 992 aa20.84■□□□□ 0.93
SSH3-205ENST00000527821 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
SSH3-205ENST00000527821 UTYO14607 1347 aa20.83■□□□□ 0.93
SSH3-205ENST00000527821 CSF1RP07333 972 aa20.83■□□□□ 0.93
SSH3-205ENST00000527821 CLUAP1Q96AJ1 413 aa20.83■□□□□ 0.93
SSH3-205ENST00000527821 SUCLG2Q96I99 432 aa20.83■□□□□ 0.93
SSH3-205ENST00000527821 USP44Q9H0E7 712 aa20.83■□□□□ 0.93
SSH3-205ENST00000527821 ZNF277Q9NRM2 450 aaPredicted RBP20.83■□□□□ 0.93
SSH3-205ENST00000527821 RTL9Q8NET4 1388 aa20.83■□□□□ 0.92
SSH3-205ENST00000527821 SNED1Q8TER0 1413 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 ITGA6P23229 1130 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 FAM161AQ3B820 660 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 EPHA10Q5JZY3 1008 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 LMBR1LQ6UX01 489 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 MPNDQ8N594 471 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 PSMD1Q99460 953 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 TNNQ9UQP3 1299 aa20.82■□□□□ 0.92
SSH3-205ENST00000527821 DPP8Q6V1X1 898 aaPredicted RBP20.81■□□□□ 0.92
SSH3-205ENST00000527821 RCAN3Q9UKA8 241 aa20.81■□□□□ 0.92
SSH3-205ENST00000527821 LRRC37AA6NMS7 1700 aa20.81■□□□□ 0.92
SSH3-205ENST00000527821 SPEF2Q9C093 1822 aa20.81■□□□□ 0.92
SSH3-205ENST00000527821 ANKRD18BA2A2Z9 1011 aa20.8■□□□□ 0.92
SSH3-205ENST00000527821 INTS3Q68E01 1043 aaKnown RBP20.8■□□□□ 0.92
SSH3-205ENST00000527821 TIAM2Q8IVF5 1701 aa20.8■□□□□ 0.92
SSH3-205ENST00000527821 DICER1Q9UPY3 1922 aaKnown RBP20.8■□□□□ 0.92
SSH3-205ENST00000527821 UBTFL1P0CB47 393 aaPredicted RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 IGHMBP2P38935 993 aaKnown RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 IARSP41252 1262 aaKnown RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 IFIT5Q13325 482 aaKnown RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 FTSJ3Q8IY81 847 aaKnown RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 ZNF784Q8NCA9 323 aaPredicted RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 SUPT20HQ8NEM7 779 aa20.79■□□□□ 0.92
SSH3-205ENST00000527821 KAZALD1Q96I82 304 aa20.79■□□□□ 0.92
SSH3-205ENST00000527821 BICC1Q9H694 974 aaKnown RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 NSFL1CQ9UNZ2 370 aaKnown RBP20.79■□□□□ 0.92
SSH3-205ENST00000527821 CCDC57Q2TAC2 916 aa20.78■□□□□ 0.92
SSH3-205ENST00000527821 ZNF526Q8TF50 670 aaPredicted RBP20.78■□□□□ 0.92
SSH3-205ENST00000527821 GPSM2P81274 684 aa20.77■□□□□ 0.92
SSH3-205ENST00000527821 MPHOSPH8Q99549 860 aa20.77■□□□□ 0.92
SSH3-205ENST00000527821 BSDC1Q9NW68 430 aaPredicted RBP20.77■□□□□ 0.92
SSH3-205ENST00000527821 ZC3H4Q9UPT8 1303 aaKnown RBP20.77■□□□□ 0.91
SSH3-205ENST00000527821 TAF7LQ5H9L4 462 aa20.76■□□□□ 0.91
SSH3-205ENST00000527821 DZIP1LQ8IYY4 767 aaKnown RBP20.76■□□□□ 0.91
SSH3-205ENST00000527821 TMEM57Q8N5G2 664 aa20.76■□□□□ 0.91
SSH3-205ENST00000527821 MEIS3Q99687 375 aa20.76■□□□□ 0.91
SSH3-205ENST00000527821 RTFDC1Q9BY42 306 aaPredicted RBP20.76■□□□□ 0.91
SSH3-205ENST00000527821 ANKIB1Q9P2G1 1089 aa20.76■□□□□ 0.91
SSH3-205ENST00000527821 HDAC5Q9UQL6 1122 aa20.76■□□□□ 0.91
SSH3-205ENST00000527821 PPIP5K2O43314 1243 aa20.75■□□□□ 0.91
SSH3-205ENST00000527821 RABL6Q3YEC7 729 aaPredicted RBP20.75■□□□□ 0.91
SSH3-205ENST00000527821 LARGE2Q8N3Y3 721 aa20.75■□□□□ 0.91
SSH3-205ENST00000527821 C6orf229H3BNL8 230 aa20.74■□□□□ 0.91
SSH3-205ENST00000527821 GNAI3P08754 354 aa20.74■□□□□ 0.91
SSH3-205ENST00000527821 AOC3Q16853 763 aa20.74■□□□□ 0.91
SSH3-205ENST00000527821 ANKRD44Q8N8A2 993 aa20.74■□□□□ 0.91
SSH3-205ENST00000527821 JDP2Q8WYK2 163 aa20.74■□□□□ 0.91
SSH3-205ENST00000527821 MINPP1Q9UNW1 487 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms