RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 NUCB1Q02818 461 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
SORL1-205ENST00000527649 ANKRD45Q5TZF3 282 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 NLGN1Q8N2Q7 840 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 GREM2Q9H772 168 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 LAMB2P55268 1798 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 SERPINB2P05120 415 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 CNBD1Q8NA66 436 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 SIL1Q9H173 461 aa16.82■□□□□ 0.28
SORL1-205ENST00000527649 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
SORL1-205ENST00000527649 SMARCA5O60264 1052 aaPredicted RBP16.81■□□□□ 0.28
SORL1-205ENST00000527649 PRR5LQ6MZQ0 368 aa16.81■□□□□ 0.28
SORL1-205ENST00000527649 ZNF594Q96JF6 807 aaPredicted RBP16.81■□□□□ 0.28
SORL1-205ENST00000527649 BCL11AQ9H165 835 aa16.81■□□□□ 0.28
SORL1-205ENST00000527649 NOP58Q9Y2X3 529 aaKnown RBP16.81■□□□□ 0.28
SORL1-205ENST00000527649 NPHP1O15259 732 aa16.8■□□□□ 0.28
SORL1-205ENST00000527649 MMP10P09238 476 aa16.8■□□□□ 0.28
SORL1-205ENST00000527649 SLC10A5Q5PT55 438 aa16.8■□□□□ 0.28
SORL1-205ENST00000527649 CHD1LQ86WJ1 897 aa16.8■□□□□ 0.28
SORL1-205ENST00000527649 LNPKQ9C0E8 428 aa16.8■□□□□ 0.28
SORL1-205ENST00000527649 ITGA6P23229 1130 aa16.79■□□□□ 0.28
SORL1-205ENST00000527649 COPRSQ9NQ92 184 aa16.79■□□□□ 0.28
SORL1-205ENST00000527649 TNRC6CQ9HCJ0 1690 aaKnown RBP16.79■□□□□ 0.28
SORL1-205ENST00000527649 CASZ1Q86V15 1759 aa16.79■□□□□ 0.28
SORL1-205ENST00000527649 PDE4AP27815 886 aa16.79■□□□□ 0.28
SORL1-205ENST00000527649 CCDC57Q2TAC2 916 aa16.79■□□□□ 0.28
SORL1-205ENST00000527649 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
SORL1-205ENST00000527649 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
SORL1-205ENST00000527649 IFIT5Q13325 482 aaKnown RBP16.78■□□□□ 0.28
SORL1-205ENST00000527649 SEC31BQ9NQW1 1179 aa16.78■□□□□ 0.28
SORL1-205ENST00000527649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.78■□□□□ 0.28
SORL1-205ENST00000527649 COL4A1P02462 1669 aa16.78■□□□□ 0.28
SORL1-205ENST00000527649 RGS3P49796 1198 aa16.77■□□□□ 0.28
SORL1-205ENST00000527649 OS9Q13438 667 aaPredicted RBP16.77■□□□□ 0.28
SORL1-205ENST00000527649 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
SORL1-205ENST00000527649 LRRCC1Q9C099 1032 aa16.77■□□□□ 0.28
SORL1-205ENST00000527649 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.27
SORL1-205ENST00000527649 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.27
SORL1-205ENST00000527649 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.27
SORL1-205ENST00000527649 NRXN2Q9P2S2 1712 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 ANKRD18BA2A2Z9 1011 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 RAB11FIP3O75154 756 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 SASH1O94885 1247 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 G3BP1Q13283 466 aaKnown RBP eCLIP16.76■□□□□ 0.27
SORL1-205ENST00000527649 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
SORL1-205ENST00000527649 LRRC24Q50LG9 513 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 ATG9AQ7Z3C6 839 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 RHPN1Q8TCX5 695 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
SORL1-205ENST00000527649 NLRP3Q96P20 1036 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
SORL1-205ENST00000527649 ST5P78524 1137 aa16.75■□□□□ 0.27
SORL1-205ENST00000527649 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
SORL1-205ENST00000527649 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
SORL1-205ENST00000527649 TAF1P21675 1872 aa16.74■□□□□ 0.27
SORL1-205ENST00000527649 TAF7LQ5H9L4 462 aa16.74■□□□□ 0.27
SORL1-205ENST00000527649 KIF1BPQ96EK5 621 aa16.74■□□□□ 0.27
SORL1-205ENST00000527649 EYA2O00167 538 aa16.74■□□□□ 0.27
SORL1-205ENST00000527649 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
SORL1-205ENST00000527649 ZBTB7AO95365 584 aa16.73■□□□□ 0.27
SORL1-205ENST00000527649 TFCP2Q12800 502 aa16.73■□□□□ 0.27
SORL1-205ENST00000527649 RIC1Q4ADV7 1423 aa16.73■□□□□ 0.27
SORL1-205ENST00000527649 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
SORL1-205ENST00000527649 LDHAL6AQ6ZMR3 332 aa16.72■□□□□ 0.27
SORL1-205ENST00000527649 ERC1Q8IUD2 1116 aa16.72■□□□□ 0.27
SORL1-205ENST00000527649 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
SORL1-205ENST00000527649 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
SORL1-205ENST00000527649 LRP5O75197 1615 aa16.72■□□□□ 0.27
SORL1-205ENST00000527649 CIAO1O76071 339 aa16.72■□□□□ 0.27
SORL1-205ENST00000527649 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
SORL1-205ENST00000527649 SPEF2Q9C093 1822 aa16.71■□□□□ 0.27
SORL1-205ENST00000527649 IL15P40933 162 aaPredicted RBP16.71■□□□□ 0.27
SORL1-205ENST00000527649 CRY2Q49AN0 593 aa16.71■□□□□ 0.27
SORL1-205ENST00000527649 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
SORL1-205ENST00000527649 CNNM1Q9NRU3 951 aa16.7■□□□□ 0.26
SORL1-205ENST00000527649 KLRG2A4D1S0 409 aaPredicted RBP16.69■□□□□ 0.26
SORL1-205ENST00000527649 PLEKHM2Q8IWE5 1019 aa16.69■□□□□ 0.26
SORL1-205ENST00000527649 EAF2Q96CJ1 260 aaPredicted RBP16.69■□□□□ 0.26
SORL1-205ENST00000527649 CDC5LQ99459 802 aaKnown RBP16.69■□□□□ 0.26
SORL1-205ENST00000527649 BRIP1Q9BX63 1249 aa16.69■□□□□ 0.26
SORL1-205ENST00000527649 FBXO3Q9UK99 471 aa16.69■□□□□ 0.26
SORL1-205ENST00000527649 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
SORL1-205ENST00000527649 IGHMBP2P38935 993 aaKnown RBP16.69■□□□□ 0.26
SORL1-205ENST00000527649 TSHZ3Q63HK5 1081 aa16.69■□□□□ 0.26
SORL1-205ENST00000527649 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
SORL1-205ENST00000527649 SLC51AQ86UW1 340 aa16.69■□□□□ 0.26
SORL1-205ENST00000527649 MPHOSPH8Q99549 860 aa16.69■□□□□ 0.26
SORL1-205ENST00000527649 SALL3Q9BXA9 1300 aa16.69■□□□□ 0.26
SORL1-205ENST00000527649 AACSQ86V21 672 aa16.68■□□□□ 0.26
SORL1-205ENST00000527649 ANKRD18AQ8IVF6 992 aa16.68■□□□□ 0.26
SORL1-205ENST00000527649 CLASRPQ8N2M8 674 aaKnown RBP16.68■□□□□ 0.26
SORL1-205ENST00000527649 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
SORL1-205ENST00000527649 TNNI3KQ59H18 835 aa16.67■□□□□ 0.26
SORL1-205ENST00000527649 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
SORL1-205ENST00000527649 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
SORL1-205ENST00000527649 FPGT-TNNI3KV9GXZ4 949 aa16.67■□□□□ 0.26
SORL1-205ENST00000527649 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
SORL1-205ENST00000527649 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
SORL1-205ENST00000527649 METTL24Q5JXM2 366 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms