RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 DNAAF4Q8WXU2 420 aa33.67■■■□□ 2.98
TSPAN4-217ENST00000527644 NEURL1BA8MQ27 555 aa33.66■■■□□ 2.98
TSPAN4-217ENST00000527644 TOMM70O94826 608 aa33.66■■■□□ 2.98
TSPAN4-217ENST00000527644 PDE8AO60658 829 aa33.65■■■□□ 2.98
TSPAN4-217ENST00000527644 CWF19L2Q2TBE0 894 aaKnown RBP33.65■■■□□ 2.98
TSPAN4-217ENST00000527644 SLC51AQ86UW1 340 aa33.65■■■□□ 2.98
TSPAN4-217ENST00000527644 MIER1Q8N108 512 aa33.65■■■□□ 2.98
TSPAN4-217ENST00000527644 CDHR2Q9BYE9 1310 aa33.64■■■□□ 2.98
TSPAN4-217ENST00000527644 C16orf71Q8IYS4 520 aaPredicted RBP33.64■■■□□ 2.98
TSPAN4-217ENST00000527644 JARID2Q92833 1246 aaPredicted RBP33.64■■■□□ 2.98
TSPAN4-217ENST00000527644 VEGFAP15692 232 aaPredicted RBP33.62■■■□□ 2.97
TSPAN4-217ENST00000527644 CCDC152Q4G0S7 254 aa33.61■■■□□ 2.97
TSPAN4-217ENST00000527644 LINS1Q8NG48 757 aa33.61■■■□□ 2.97
TSPAN4-217ENST00000527644 JDP2Q8WYK2 163 aa33.61■■■□□ 2.97
TSPAN4-217ENST00000527644 CELF1Q92879 486 aaKnown RBP33.61■■■□□ 2.97
TSPAN4-217ENST00000527644 MPNDQ8N594 471 aa33.6■■■□□ 2.97
TSPAN4-217ENST00000527644 SUPT20HQ8NEM7 779 aa33.6■■■□□ 2.97
TSPAN4-217ENST00000527644 RTFDC1Q9BY42 306 aaPredicted RBP33.6■■■□□ 2.97
TSPAN4-217ENST00000527644 VPS33BQ9H267 617 aa33.6■■■□□ 2.97
TSPAN4-217ENST00000527644 TAF1P21675 1872 aa33.6■■■□□ 2.97
TSPAN4-217ENST00000527644 H7C1W4 665 aa33.59■■■□□ 2.97
TSPAN4-217ENST00000527644 FZD9O00144 591 aa33.59■■■□□ 2.97
TSPAN4-217ENST00000527644 GCKRQ14397 625 aa33.59■■■□□ 2.97
TSPAN4-217ENST00000527644 DPP8Q6V1X1 898 aaPredicted RBP33.59■■■□□ 2.97
TSPAN4-217ENST00000527644 CDCA7LQ96GN5 454 aa33.59■■■□□ 2.97
TSPAN4-217ENST00000527644 DDNO94850 711 aaPredicted RBP33.58■■■□□ 2.97
TSPAN4-217ENST00000527644 RPS8P62241 208 aaKnown RBP33.58■■■□□ 2.97
TSPAN4-217ENST00000527644 RBM46Q8TBY0 533 aaKnown RBP33.58■■■□□ 2.97
TSPAN4-217ENST00000527644 WDR90Q96KV7 1748 aa33.58■■■□□ 2.97
TSPAN4-217ENST00000527644 TRMT2AQ8IZ69 625 aaKnown RBP33.57■■■□□ 2.96
TSPAN4-217ENST00000527644 LARGE2Q8N3Y3 721 aa33.57■■■□□ 2.96
TSPAN4-217ENST00000527644 POTECB2RU33 542 aa33.56■■■□□ 2.96
TSPAN4-217ENST00000527644 F6X3S4 739 aa33.55■■■□□ 2.96
TSPAN4-217ENST00000527644 UBE3BQ7Z3V4 1068 aa33.55■■■□□ 2.96
TSPAN4-217ENST00000527644 SEC31BQ9NQW1 1179 aa33.55■■■□□ 2.96
TSPAN4-217ENST00000527644 PPIP5K2O43314 1243 aa33.54■■■□□ 2.96
TSPAN4-217ENST00000527644 CTSWP56202 376 aa33.54■■■□□ 2.96
TSPAN4-217ENST00000527644 ZNF541Q9H0D2 1346 aa33.53■■■□□ 2.96
TSPAN4-217ENST00000527644 BEND3Q5T5X7 828 aa33.53■■■□□ 2.96
TSPAN4-217ENST00000527644 L3MBTL3Q96JM7 780 aaPredicted RBP33.52■■■□□ 2.96
TSPAN4-217ENST00000527644 CCDC85AQ96PX6 553 aaPredicted RBP33.52■■■□□ 2.96
TSPAN4-217ENST00000527644 LRRC37AA6NMS7 1700 aa33.52■■■□□ 2.96
TSPAN4-217ENST00000527644 EIF6P56537 245 aaKnown RBP33.51■■■□□ 2.95
TSPAN4-217ENST00000527644 AOC3Q16853 763 aa33.51■■■□□ 2.95
TSPAN4-217ENST00000527644 NIM1KQ8IY84 436 aa33.51■■■□□ 2.95
TSPAN4-217ENST00000527644 MRPL50Q8N5N7 158 aaKnown RBP33.51■■■□□ 2.95
TSPAN4-217ENST00000527644 TTLL11Q8NHH1 800 aa33.51■■■□□ 2.95
TSPAN4-217ENST00000527644 COL4A5P29400 1685 aa33.51■■■□□ 2.95
TSPAN4-217ENST00000527644 COL4A1P02462 1669 aa33.5■■■□□ 2.95
TSPAN4-217ENST00000527644 CASP7P55210 303 aa33.5■■■□□ 2.95
TSPAN4-217ENST00000527644 PLA2G12BQ9BX93 195 aa33.5■■■□□ 2.95
TSPAN4-217ENST00000527644 NSFL1CQ9UNZ2 370 aaKnown RBP33.5■■■□□ 2.95
TSPAN4-217ENST00000527644 HSPA6P17066 643 aa33.49■■■□□ 2.95
TSPAN4-217ENST00000527644 FSTL1Q12841 308 aa33.49■■■□□ 2.95
TSPAN4-217ENST00000527644 GPC2Q8N158 579 aa33.49■■■□□ 2.95
TSPAN4-217ENST00000527644 IQCA1LA6NCM1 817 aa33.48■■■□□ 2.95
TSPAN4-217ENST00000527644 KIAA2012Q0VF49 1180 aa33.48■■■□□ 2.95
TSPAN4-217ENST00000527644 ANKRD18AQ8IVF6 992 aa33.48■■■□□ 2.95
TSPAN4-217ENST00000527644 SSH1Q8WYL5 1049 aa33.48■■■□□ 2.95
TSPAN4-217ENST00000527644 CDC5LQ99459 802 aaKnown RBP33.47■■■□□ 2.95
TSPAN4-217ENST00000527644 MYH3P11055 1940 aa33.47■■■□□ 2.95
TSPAN4-217ENST00000527644 RTL9Q8NET4 1388 aa33.47■■■□□ 2.95
TSPAN4-217ENST00000527644 CT47B1P0C2W7 299 aaPredicted RBP33.46■■■□□ 2.95
TSPAN4-217ENST00000527644 GPSM2P81274 684 aa33.46■■■□□ 2.95
TSPAN4-217ENST00000527644 ALDH1L2Q3SY69 923 aa33.46■■■□□ 2.95
TSPAN4-217ENST00000527644 SMC1BQ8NDV3 1235 aa33.46■■■□□ 2.95
TSPAN4-217ENST00000527644 SLC4A10Q6U841 1118 aa33.45■■■□□ 2.95
TSPAN4-217ENST00000527644 GREM2Q9H772 168 aa33.45■■■□□ 2.95
TSPAN4-217ENST00000527644 PTPRCP08575 1304 aa33.45■■■□□ 2.95
TSPAN4-217ENST00000527644 DUOX1Q9NRD9 1551 aa33.44■■■□□ 2.94
TSPAN4-217ENST00000527644 ALDH1L1O75891 902 aa33.44■■■□□ 2.94
TSPAN4-217ENST00000527644 ZNRF3Q9ULT6 936 aa33.44■■■□□ 2.94
TSPAN4-217ENST00000527644 SRCIN1Q9C0H9 1055 aa33.43■■■□□ 2.94
TSPAN4-217ENST00000527644 PODXL2Q9NZ53 605 aa33.43■■■□□ 2.94
TSPAN4-217ENST00000527644 POLLQ9UGP5 575 aa33.43■■■□□ 2.94
TSPAN4-217ENST00000527644 SCN4AP35499 1836 aa33.43■■■□□ 2.94
TSPAN4-217ENST00000527644 C6orf229H3BNL8 230 aa33.42■■■□□ 2.94
TSPAN4-217ENST00000527644 CSF1RP07333 972 aa33.42■■■□□ 2.94
TSPAN4-217ENST00000527644 WASHC4Q2M389 1173 aa33.42■■■□□ 2.94
TSPAN4-217ENST00000527644 GJA3Q9Y6H8 435 aa33.42■■■□□ 2.94
TSPAN4-217ENST00000527644 EYA3Q99504 573 aa33.41■■■□□ 2.94
TSPAN4-217ENST00000527644 HACL1Q9UJ83 578 aa33.41■■■□□ 2.94
TSPAN4-217ENST00000527644 GRM8O00222 908 aa33.4■■■□□ 2.94
TSPAN4-217ENST00000527644 TBC1D16Q8TBP0 767 aa33.4■■■□□ 2.94
TSPAN4-217ENST00000527644 BCL2L13Q9BXK5 485 aa33.4■■■□□ 2.94
TSPAN4-217ENST00000527644 TAF1DQ9H5J8 278 aaPredicted RBP33.4■■■□□ 2.94
TSPAN4-217ENST00000527644 BSDC1Q9NW68 430 aaPredicted RBP33.4■■■□□ 2.94
TSPAN4-217ENST00000527644 ANKIB1Q9P2G1 1089 aa33.4■■■□□ 2.94
TSPAN4-217ENST00000527644 SMC4Q9NTJ3 1288 aa33.39■■■□□ 2.94
TSPAN4-217ENST00000527644 C9orf78Q9NZ63 289 aaPredicted RBP33.39■■■□□ 2.94
TSPAN4-217ENST00000527644 LTBP1Q14766 1721 aa33.39■■■□□ 2.94
TSPAN4-217ENST00000527644 ITGA6P23229 1130 aa33.37■■■□□ 2.93
TSPAN4-217ENST00000527644 CXCL9Q07325 125 aa33.37■■■□□ 2.93
TSPAN4-217ENST00000527644 GGA1Q9UJY5 639 aa33.37■■■□□ 2.93
TSPAN4-217ENST00000527644 IGHMBP2P38935 993 aaKnown RBP33.36■■■□□ 2.93
TSPAN4-217ENST00000527644 APLP1P51693 650 aa33.36■■■□□ 2.93
TSPAN4-217ENST00000527644 FOXO4P98177 505 aa33.36■■■□□ 2.93
TSPAN4-217ENST00000527644 FAM161AQ3B820 660 aa33.36■■■□□ 2.93
TSPAN4-217ENST00000527644 XDHP47989 1333 aa33.35■■■□□ 2.93
TSPAN4-217ENST00000527644 RIMBP2O15034 1052 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms