RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 NPHP1O15259 732 aa23.22■■□□□ 1.31
SMPD1-203ENST00000527275 CSF1RP07333 972 aa23.22■■□□□ 1.31
SMPD1-203ENST00000527275 CTSWP56202 376 aa23.22■■□□□ 1.31
SMPD1-203ENST00000527275 EXOC6BQ9Y2D4 811 aa23.22■■□□□ 1.31
SMPD1-203ENST00000527275 SERPINB2P05120 415 aa23.21■■□□□ 1.31
SMPD1-203ENST00000527275 KLHDC4Q8TBB5 520 aa23.21■■□□□ 1.31
SMPD1-203ENST00000527275 ABCC12Q96J65 1359 aa23.21■■□□□ 1.31
SMPD1-203ENST00000527275 POLRMTO00411 1230 aaKnown RBP23.21■■□□□ 1.31
SMPD1-203ENST00000527275 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
SMPD1-203ENST00000527275 PA2G4Q9UQ80 394 aaKnown RBP23.21■■□□□ 1.31
SMPD1-203ENST00000527275 SURF6O75683 361 aaKnown RBP23.2■■□□□ 1.3
SMPD1-203ENST00000527275 MYH3P11055 1940 aa23.2■■□□□ 1.3
SMPD1-203ENST00000527275 DDX60Q8IY21 1712 aaKnown RBP23.2■■□□□ 1.3
SMPD1-203ENST00000527275 APBB1O00213 710 aa23.2■■□□□ 1.3
SMPD1-203ENST00000527275 HSP90B1P14625 803 aaKnown RBP23.2■■□□□ 1.3
SMPD1-203ENST00000527275 RFX5P48382 616 aaPredicted RBP23.2■■□□□ 1.3
SMPD1-203ENST00000527275 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
SMPD1-203ENST00000527275 MMP10P09238 476 aa23.19■■□□□ 1.3
SMPD1-203ENST00000527275 PRR5LQ6MZQ0 368 aa23.19■■□□□ 1.3
SMPD1-203ENST00000527275 GREM2Q9H772 168 aa23.19■■□□□ 1.3
SMPD1-203ENST00000527275 PTPN12Q05209 780 aaKnown RBP23.18■■□□□ 1.3
SMPD1-203ENST00000527275 C3orf67Q6ZVT6 689 aa23.18■■□□□ 1.3
SMPD1-203ENST00000527275 CCDC57Q2TAC2 916 aa23.17■■□□□ 1.3
SMPD1-203ENST00000527275 SIL1Q9H173 461 aa23.17■■□□□ 1.3
SMPD1-203ENST00000527275 COPRSQ9NQ92 184 aa23.17■■□□□ 1.3
SMPD1-203ENST00000527275 NOP58Q9Y2X3 529 aaKnown RBP23.17■■□□□ 1.3
SMPD1-203ENST00000527275 SEC24BO95487 1268 aa23.16■■□□□ 1.3
SMPD1-203ENST00000527275 ITGA6P23229 1130 aa23.16■■□□□ 1.3
SMPD1-203ENST00000527275 IFIT5Q13325 482 aaKnown RBP23.16■■□□□ 1.3
SMPD1-203ENST00000527275 R3HDM1Q15032 1099 aaKnown RBP23.16■■□□□ 1.3
SMPD1-203ENST00000527275 LAMB2P55268 1798 aa23.16■■□□□ 1.3
SMPD1-203ENST00000527275 ZNF594Q96JF6 807 aaPredicted RBP23.15■■□□□ 1.3
SMPD1-203ENST00000527275 NLRP3Q96P20 1036 aa23.15■■□□□ 1.3
SMPD1-203ENST00000527275 CCDC152Q4G0S7 254 aa23.14■■□□□ 1.3
SMPD1-203ENST00000527275 BCL11AQ9H165 835 aa23.14■■□□□ 1.3
SMPD1-203ENST00000527275 PARP3Q9Y6F1 533 aa23.14■■□□□ 1.3
SMPD1-203ENST00000527275 ZBTB47Q9UFB7 747 aaPredicted RBP23.14■■□□□ 1.29
SMPD1-203ENST00000527275 ST5P78524 1137 aa23.13■■□□□ 1.29
SMPD1-203ENST00000527275 SF3B3Q15393 1217 aaKnown RBP23.13■■□□□ 1.29
SMPD1-203ENST00000527275 SLC16A10Q8TF71 515 aa23.13■■□□□ 1.29
SMPD1-203ENST00000527275 SMARCA5O60264 1052 aaPredicted RBP23.13■■□□□ 1.29
SMPD1-203ENST00000527275 OS9Q13438 667 aaPredicted RBP23.13■■□□□ 1.29
SMPD1-203ENST00000527275 ANKRD18BA2A2Z9 1011 aa23.12■■□□□ 1.29
SMPD1-203ENST00000527275 G3BP1Q13283 466 aaKnown RBP eCLIP23.12■■□□□ 1.29
SMPD1-203ENST00000527275 HSP90AB4PQ58FF6 505 aa23.12■■□□□ 1.29
SMPD1-203ENST00000527275 SEC31BQ9NQW1 1179 aa23.12■■□□□ 1.29
SMPD1-203ENST00000527275 LRRCC1Q9C099 1032 aa23.11■■□□□ 1.29
SMPD1-203ENST00000527275 RAB11FIP3O75154 756 aa23.11■■□□□ 1.29
SMPD1-203ENST00000527275 TAF7LQ5H9L4 462 aa23.11■■□□□ 1.29
SMPD1-203ENST00000527275 ERICH6Q7L0X2 663 aa23.1■■□□□ 1.29
SMPD1-203ENST00000527275 RHPN1Q8TCX5 695 aa23.1■■□□□ 1.29
SMPD1-203ENST00000527275 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
SMPD1-203ENST00000527275 TNRC6CQ9HCJ0 1690 aaKnown RBP23.1■■□□□ 1.29
SMPD1-203ENST00000527275 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
SMPD1-203ENST00000527275 RTL9Q8NET4 1388 aa23.09■■□□□ 1.29
SMPD1-203ENST00000527275 PSDA5PKW4 1024 aaPredicted RBP23.09■■□□□ 1.29
SMPD1-203ENST00000527275 SASH1O94885 1247 aa23.09■■□□□ 1.29
SMPD1-203ENST00000527275 BMP2KLQ5H9B9 411 aa23.09■■□□□ 1.29
SMPD1-203ENST00000527275 KIF1BPQ96EK5 621 aa23.09■■□□□ 1.29
SMPD1-203ENST00000527275 PUS3Q9BZE2 481 aaKnown RBP23.09■■□□□ 1.29
SMPD1-203ENST00000527275 IL1RAPL2Q9NP60 686 aa23.09■■□□□ 1.29
SMPD1-203ENST00000527275 NRXN2Q9P2S2 1712 aa23.09■■□□□ 1.29
SMPD1-203ENST00000527275 ZBTB7AO95365 584 aa23.08■■□□□ 1.29
SMPD1-203ENST00000527275 LRRC24Q50LG9 513 aa23.08■■□□□ 1.29
SMPD1-203ENST00000527275 EYA2O00167 538 aa23.08■■□□□ 1.29
SMPD1-203ENST00000527275 ATG9AQ7Z3C6 839 aa23.08■■□□□ 1.29
SMPD1-203ENST00000527275 ERC1Q8IUD2 1116 aa23.08■■□□□ 1.29
SMPD1-203ENST00000527275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.08■■□□□ 1.29
SMPD1-203ENST00000527275 LDHAL6AQ6ZMR3 332 aa23.07■■□□□ 1.28
SMPD1-203ENST00000527275 PLEKHM2Q8IWE5 1019 aa23.07■■□□□ 1.28
SMPD1-203ENST00000527275 UPF2Q9HAU5 1272 aaKnown RBP23.07■■□□□ 1.28
SMPD1-203ENST00000527275 RIC1Q4ADV7 1423 aa23.07■■□□□ 1.28
SMPD1-203ENST00000527275 GOLGB1Q14789 3259 aaKnown RBP23.07■■□□□ 1.28
SMPD1-203ENST00000527275 C16orf71Q8IYS4 520 aaPredicted RBP23.07■■□□□ 1.28
SMPD1-203ENST00000527275 BRIP1Q9BX63 1249 aa23.06■■□□□ 1.28
SMPD1-203ENST00000527275 TAF1P21675 1872 aa23.06■■□□□ 1.28
SMPD1-203ENST00000527275 CIAO1O76071 339 aa23.06■■□□□ 1.28
SMPD1-203ENST00000527275 CRY2Q49AN0 593 aa23.06■■□□□ 1.28
SMPD1-203ENST00000527275 IL15P40933 162 aaPredicted RBP23.05■■□□□ 1.28
SMPD1-203ENST00000527275 COL4A1P02462 1669 aa23.05■■□□□ 1.28
SMPD1-203ENST00000527275 CDC5LQ99459 802 aaKnown RBP23.04■■□□□ 1.28
SMPD1-203ENST00000527275 MTFR1LQ9H019 292 aa23.04■■□□□ 1.28
SMPD1-203ENST00000527275 FBXO3Q9UK99 471 aa23.04■■□□□ 1.28
SMPD1-203ENST00000527275 ATF5Q9Y2D1 282 aaPredicted RBP23.04■■□□□ 1.28
SMPD1-203ENST00000527275 KLRG2A4D1S0 409 aaPredicted RBP23.04■■□□□ 1.28
SMPD1-203ENST00000527275 TFCP2Q12800 502 aa23.04■■□□□ 1.28
SMPD1-203ENST00000527275 OTUD7AQ8TE49 926 aaPredicted RBP23.04■■□□□ 1.28
SMPD1-203ENST00000527275 CELF1Q92879 486 aaKnown RBP23.04■■□□□ 1.28
SMPD1-203ENST00000527275 MPHOSPH8Q99549 860 aa23.04■■□□□ 1.28
SMPD1-203ENST00000527275 CNNM1Q9NRU3 951 aa23.04■■□□□ 1.28
SMPD1-203ENST00000527275 RIPOR2Q9Y4F9 1068 aa23.04■■□□□ 1.28
SMPD1-203ENST00000527275 ANKRD31Q8N7Z5 1873 aa23.03■■□□□ 1.28
SMPD1-203ENST00000527275 DDX46Q7L014 1031 aaKnown RBP23.03■■□□□ 1.28
SMPD1-203ENST00000527275 IGHMBP2P38935 993 aaKnown RBP23.03■■□□□ 1.28
SMPD1-203ENST00000527275 ANKRD18AQ8IVF6 992 aa23.02■■□□□ 1.28
SMPD1-203ENST00000527275 CLASRPQ8N2M8 674 aaKnown RBP23.02■■□□□ 1.28
SMPD1-203ENST00000527275 RPGRQ92834 1020 aaKnown RBP23.02■■□□□ 1.28
SMPD1-203ENST00000527275 SRCAPQ6ZRS2 3230 aa23.01■■□□□ 1.27
SMPD1-203ENST00000527275 RPS8P62241 208 aaKnown RBP23.01■■□□□ 1.27
SMPD1-203ENST00000527275 PDE6BP35913 854 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms