RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 HSP90B1P14625 803 aaKnown RBP21■□□□□ 0.95
SMCO4-204ENST00000527149 FOXO4P98177 505 aa21■□□□□ 0.95
SMCO4-204ENST00000527149 FTSJ3Q8IY81 847 aaKnown RBP21■□□□□ 0.95
SMCO4-204ENST00000527149 MEIS3Q99687 375 aa21■□□□□ 0.95
SMCO4-204ENST00000527149 LRRC37AA6NMS7 1700 aa21■□□□□ 0.95
SMCO4-204ENST00000527149 PRPF40BQ6NWY9 871 aaKnown RBP20.99■□□□□ 0.95
SMCO4-204ENST00000527149 TTLL6Q8N841 843 aa20.99■□□□□ 0.95
SMCO4-204ENST00000527149 TTLL11Q8NHH1 800 aa20.99■□□□□ 0.95
SMCO4-204ENST00000527149 ZNF622Q969S3 477 aaKnown RBP eCLIP20.99■□□□□ 0.95
SMCO4-204ENST00000527149 CRAMP1Q96RY5 1269 aa20.99■□□□□ 0.95
SMCO4-204ENST00000527149 SNED1Q8TER0 1413 aa20.98■□□□□ 0.95
SMCO4-204ENST00000527149 CSF1RP07333 972 aa20.98■□□□□ 0.95
SMCO4-204ENST00000527149 RRP1P56182 461 aaKnown RBP20.98■□□□□ 0.95
SMCO4-204ENST00000527149 DALRD3Q5D0E6 543 aaKnown RBP20.98■□□□□ 0.95
SMCO4-204ENST00000527149 C20orf194Q5TEA3 1177 aa20.98■□□□□ 0.95
SMCO4-204ENST00000527149 RPGRQ92834 1020 aaKnown RBP20.98■□□□□ 0.95
SMCO4-204ENST00000527149 SLC51AQ86UW1 340 aa20.97■□□□□ 0.95
SMCO4-204ENST00000527149 ANKRD44Q8N8A2 993 aa20.97■□□□□ 0.95
SMCO4-204ENST00000527149 CNKSR1Q969H4 720 aa20.97■□□□□ 0.95
SMCO4-204ENST00000527149 PDE3AQ14432 1141 aa20.96■□□□□ 0.95
SMCO4-204ENST00000527149 RABL6Q3YEC7 729 aaPredicted RBP20.96■□□□□ 0.95
SMCO4-204ENST00000527149 CCDC152Q4G0S7 254 aa20.96■□□□□ 0.95
SMCO4-204ENST00000527149 C7orf43Q8WVR3 580 aa20.96■□□□□ 0.95
SMCO4-204ENST00000527149 RBM17Q96I25 401 aaKnown RBP20.96■□□□□ 0.95
SMCO4-204ENST00000527149 GREM2Q9H772 168 aa20.96■□□□□ 0.95
SMCO4-204ENST00000527149 BCS1LQ9Y276 419 aa20.96■□□□□ 0.95
SMCO4-204ENST00000527149 SPEF2Q9C093 1822 aa20.95■□□□□ 0.94
SMCO4-204ENST00000527149 FER1L6Q2WGJ9 1857 aa20.95■□□□□ 0.94
SMCO4-204ENST00000527149 FAM161AQ3B820 660 aa20.95■□□□□ 0.94
SMCO4-204ENST00000527149 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-204ENST00000527149 CCDC85AQ96PX6 553 aaPredicted RBP20.95■□□□□ 0.94
SMCO4-204ENST00000527149 BICC1Q9H694 974 aaKnown RBP20.95■□□□□ 0.94
SMCO4-204ENST00000527149 SEC31BQ9NQW1 1179 aa20.95■□□□□ 0.94
SMCO4-204ENST00000527149 UBTFL1P0CB47 393 aaPredicted RBP20.94■□□□□ 0.94
SMCO4-204ENST00000527149 MS4A1P11836 297 aa20.94■□□□□ 0.94
SMCO4-204ENST00000527149 ALDH1B1P30837 517 aa20.94■□□□□ 0.94
SMCO4-204ENST00000527149 GRAPQ13588 217 aa20.94■□□□□ 0.94
SMCO4-204ENST00000527149 DDX46Q7L014 1031 aaKnown RBP20.94■□□□□ 0.94
SMCO4-204ENST00000527149 ITPRIPQ8IWB1 547 aa20.94■□□□□ 0.94
SMCO4-204ENST00000527149 GRAPLQ8TC17 118 aaPredicted RBP20.94■□□□□ 0.94
SMCO4-204ENST00000527149 CELF1Q92879 486 aaKnown RBP20.94■□□□□ 0.94
SMCO4-204ENST00000527149 LTBP1Q14766 1721 aa20.94■□□□□ 0.94
SMCO4-204ENST00000527149 MVPQ14764 893 aaKnown RBP20.93■□□□□ 0.94
SMCO4-204ENST00000527149 LMBR1LQ6UX01 489 aa20.93■□□□□ 0.94
SMCO4-204ENST00000527149 ZBTB7BO15156 539 aaPredicted RBP20.92■□□□□ 0.94
SMCO4-204ENST00000527149 GNAI3P08754 354 aa20.92■□□□□ 0.94
SMCO4-204ENST00000527149 LRRFIP2Q9Y608 721 aaKnown RBP20.92■□□□□ 0.94
SMCO4-204ENST00000527149 A0A1B0GUL6 1792 aa20.91■□□□□ 0.94
SMCO4-204ENST00000527149 PPEF1O14829 653 aaPredicted RBP20.91■□□□□ 0.94
SMCO4-204ENST00000527149 OLFM4Q6UX06 510 aa20.91■□□□□ 0.94
SMCO4-204ENST00000527149 PELP1Q8IZL8 1130 aaKnown RBP20.91■□□□□ 0.94
SMCO4-204ENST00000527149 COG6Q9Y2V7 657 aa20.91■□□□□ 0.94
SMCO4-204ENST00000527149 DUOX1Q9NRD9 1551 aa20.9■□□□□ 0.94
SMCO4-204ENST00000527149 C21orf2O43822 256 aa20.9■□□□□ 0.94
SMCO4-204ENST00000527149 ITGA6P23229 1130 aa20.9■□□□□ 0.94
SMCO4-204ENST00000527149 GPR162Q16538 588 aa20.9■□□□□ 0.94
SMCO4-204ENST00000527149 BBOX1O75936 387 aa20.89■□□□□ 0.93
SMCO4-204ENST00000527149 ATP6V0A2Q9Y487 856 aa20.89■□□□□ 0.93
SMCO4-204ENST00000527149 RPS8P62241 208 aaKnown RBP20.88■□□□□ 0.93
SMCO4-204ENST00000527149 DDX19BQ9UMR2 479 aa20.88■□□□□ 0.93
SMCO4-204ENST00000527149 NFKBIEO00221 500 aa20.87■□□□□ 0.93
SMCO4-204ENST00000527149 GNAI2P04899 355 aa20.87■□□□□ 0.93
SMCO4-204ENST00000527149 MTX1Q13505 466 aa20.87■□□□□ 0.93
SMCO4-204ENST00000527149 TMC4Q7Z404 712 aa20.87■□□□□ 0.93
SMCO4-204ENST00000527149 CDC5LQ99459 802 aaKnown RBP20.87■□□□□ 0.93
SMCO4-204ENST00000527149 ZNF219Q9P2Y4 722 aaPredicted RBP20.87■□□□□ 0.93
SMCO4-204ENST00000527149 SBF1O95248 1867 aa20.87■□□□□ 0.93
SMCO4-204ENST00000527149 GRIN3BO60391 1043 aa20.86■□□□□ 0.93
SMCO4-204ENST00000527149 RFX5P48382 616 aaPredicted RBP20.86■□□□□ 0.93
SMCO4-204ENST00000527149 CCDC93Q567U6 631 aa20.86■□□□□ 0.93
SMCO4-204ENST00000527149 ZBTB40Q9NUA8 1239 aa20.86■□□□□ 0.93
SMCO4-204ENST00000527149 ANKRD18BA2A2Z9 1011 aa20.85■□□□□ 0.93
SMCO4-204ENST00000527149 IFIT5Q13325 482 aaKnown RBP20.85■□□□□ 0.93
SMCO4-204ENST00000527149 SOGA3Q5TF21 947 aa20.85■□□□□ 0.93
SMCO4-204ENST00000527149 ANKRD18AQ8IVF6 992 aa20.85■□□□□ 0.93
SMCO4-204ENST00000527149 SP8Q8IXZ3 490 aa20.85■□□□□ 0.93
SMCO4-204ENST00000527149 C1orf115Q9H7X2 142 aa20.85■□□□□ 0.93
SMCO4-204ENST00000527149 HDAC5Q9UQL6 1122 aa20.85■□□□□ 0.93
SMCO4-204ENST00000527149 CHMP3Q9Y3E7 222 aa20.85■□□□□ 0.93
SMCO4-204ENST00000527149 SUPT16HQ9Y5B9 1047 aaKnown RBP20.85■□□□□ 0.93
SMCO4-204ENST00000527149 PRELPP51888 382 aa20.84■□□□□ 0.93
SMCO4-204ENST00000527149 CC2D2BQ6DHV5 1058 aa20.84■□□□□ 0.93
SMCO4-204ENST00000527149 BSDC1Q9NW68 430 aaPredicted RBP20.84■□□□□ 0.93
SMCO4-204ENST00000527149 CHD4Q14839 1912 aa20.84■□□□□ 0.93
SMCO4-204ENST00000527149 LTBP3Q9NS15 1303 aa20.83■□□□□ 0.93
SMCO4-204ENST00000527149 CCDC57Q2TAC2 916 aa20.83■□□□□ 0.93
SMCO4-204ENST00000527149 ZNF594Q96JF6 807 aaPredicted RBP20.83■□□□□ 0.93
SMCO4-204ENST00000527149 CCDC88AQ3V6T2 1871 aa20.82■□□□□ 0.92
SMCO4-204ENST00000527149 RASSF7Q02833 373 aa20.82■□□□□ 0.92
SMCO4-204ENST00000527149 DICER1Q9UPY3 1922 aaKnown RBP20.81■□□□□ 0.92
SMCO4-204ENST00000527149 PNMA6EA0A0J9YXQ4 647 aa20.81■□□□□ 0.92
SMCO4-204ENST00000527149 IGHMBP2P38935 993 aaKnown RBP20.81■□□□□ 0.92
SMCO4-204ENST00000527149 PTPN12Q05209 780 aaKnown RBP20.81■□□□□ 0.92
SMCO4-204ENST00000527149 ARHGAP27Q6ZUM4 889 aa20.81■□□□□ 0.92
SMCO4-204ENST00000527149 COL4A5P29400 1685 aa20.8■□□□□ 0.92
SMCO4-204ENST00000527149 GPSM2P81274 684 aa20.8■□□□□ 0.92
SMCO4-204ENST00000527149 FKBP4Q02790 459 aaKnown RBP eCLIP20.8■□□□□ 0.92
SMCO4-204ENST00000527149 CEP85Q6P2H3 762 aa20.8■□□□□ 0.92
SMCO4-204ENST00000527149 RTKN2Q8IZC4 609 aa20.8■□□□□ 0.92
SMCO4-204ENST00000527149 KLHDC4Q8TBB5 520 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms