RNA–Protein interactions for RNA: ENST00000527008.1

ZNF408-203, Transcript of zinc finger protein 408, humanhuman

TSL 2

Gene ZNF408, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408-203ENST00000527008 PDE8AO60658 829 aa12.92□□□□□ -0.34
ZNF408-203ENST00000527008 TMC4Q7Z404 712 aa12.92□□□□□ -0.34
ZNF408-203ENST00000527008 TRMT2AQ8IZ69 625 aaKnown RBP12.92□□□□□ -0.34
ZNF408-203ENST00000527008 LINS1Q8NG48 757 aa12.92□□□□□ -0.34
ZNF408-203ENST00000527008 JARID2Q92833 1246 aaPredicted RBP12.92□□□□□ -0.34
ZNF408-203ENST00000527008 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
ZNF408-203ENST00000527008 F6X3S4 739 aa12.91□□□□□ -0.34
ZNF408-203ENST00000527008 GCKRQ14397 625 aa12.91□□□□□ -0.34
ZNF408-203ENST00000527008 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
ZNF408-203ENST00000527008 NMRK2Q9NPI5 230 aa12.91□□□□□ -0.34
ZNF408-203ENST00000527008 H7C1W4 665 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 KIF3CO14782 793 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 CT47B1P0C2W7 299 aaPredicted RBP12.9□□□□□ -0.34
ZNF408-203ENST00000527008 IARSP41252 1262 aaKnown RBP12.9□□□□□ -0.34
ZNF408-203ENST00000527008 CCDC152Q4G0S7 254 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 DPY19L2Q6NUT2 758 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 UBE3BQ7Z3V4 1068 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
ZNF408-203ENST00000527008 CELF1Q92879 486 aaKnown RBP12.9□□□□□ -0.34
ZNF408-203ENST00000527008 TAF1P21675 1872 aa12.9□□□□□ -0.34
ZNF408-203ENST00000527008 CTSWP56202 376 aa12.89□□□□□ -0.35
ZNF408-203ENST00000527008 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
ZNF408-203ENST00000527008 ALDH1L2Q3SY69 923 aa12.89□□□□□ -0.35
ZNF408-203ENST00000527008 BEND3Q5T5X7 828 aa12.89□□□□□ -0.35
ZNF408-203ENST00000527008 DPP8Q6V1X1 898 aaPredicted RBP12.89□□□□□ -0.35
ZNF408-203ENST00000527008 MPNDQ8N594 471 aa12.89□□□□□ -0.35
ZNF408-203ENST00000527008 SUPT20HQ8NEM7 779 aa12.89□□□□□ -0.35
ZNF408-203ENST00000527008 SSH1Q8WYL5 1049 aa12.89□□□□□ -0.35
ZNF408-203ENST00000527008 RPS8P62241 208 aaKnown RBP12.88□□□□□ -0.35
ZNF408-203ENST00000527008 JDP2Q8WYK2 163 aa12.88□□□□□ -0.35
ZNF408-203ENST00000527008 CCDC85AQ96PX6 553 aaPredicted RBP12.88□□□□□ -0.35
ZNF408-203ENST00000527008 BCL2L13Q9BXK5 485 aa12.88□□□□□ -0.35
ZNF408-203ENST00000527008 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
ZNF408-203ENST00000527008 MYH3P11055 1940 aa12.88□□□□□ -0.35
ZNF408-203ENST00000527008 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
ZNF408-203ENST00000527008 PTPRCP08575 1304 aa12.88□□□□□ -0.35
ZNF408-203ENST00000527008 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 HSPA6P17066 643 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 CASP7P55210 303 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 LARGE2Q8N3Y3 721 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 TTLL11Q8NHH1 800 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 PLA2G12BQ9BX93 195 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 SEC31BQ9NQW1 1179 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 SMC4Q9NTJ3 1288 aa12.87□□□□□ -0.35
ZNF408-203ENST00000527008 PPIP5K2O43314 1243 aa12.86□□□□□ -0.35
ZNF408-203ENST00000527008 ANKRD18AQ8IVF6 992 aa12.86□□□□□ -0.35
ZNF408-203ENST00000527008 NIM1KQ8IY84 436 aa12.86□□□□□ -0.35
ZNF408-203ENST00000527008 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
ZNF408-203ENST00000527008 CDC5LQ99459 802 aaKnown RBP12.86□□□□□ -0.35
ZNF408-203ENST00000527008 SRCIN1Q9C0H9 1055 aa12.86□□□□□ -0.35
ZNF408-203ENST00000527008 COL4A1P02462 1669 aa12.86□□□□□ -0.35
ZNF408-203ENST00000527008 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
ZNF408-203ENST00000527008 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
ZNF408-203ENST00000527008 FZD9O00144 591 aa12.85□□□□□ -0.35
ZNF408-203ENST00000527008 GRM8O00222 908 aa12.85□□□□□ -0.35
ZNF408-203ENST00000527008 TOMM70O94826 608 aa12.85□□□□□ -0.35
ZNF408-203ENST00000527008 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
ZNF408-203ENST00000527008 VEGFAP15692 232 aaPredicted RBP12.85□□□□□ -0.35
ZNF408-203ENST00000527008 AOC3Q16853 763 aa12.85□□□□□ -0.35
ZNF408-203ENST00000527008 GREM2Q9H772 168 aa12.85□□□□□ -0.35
ZNF408-203ENST00000527008 C9orf78Q9NZ63 289 aaPredicted RBP12.85□□□□□ -0.35
ZNF408-203ENST00000527008 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
ZNF408-203ENST00000527008 COL4A5P29400 1685 aa12.84□□□□□ -0.35
ZNF408-203ENST00000527008 EIF6P56537 245 aaKnown RBP12.84□□□□□ -0.35
ZNF408-203ENST00000527008 GPSM2P81274 684 aa12.84□□□□□ -0.35
ZNF408-203ENST00000527008 DUOX1Q9NRD9 1551 aa12.84□□□□□ -0.35
ZNF408-203ENST00000527008 C6orf229H3BNL8 230 aa12.83□□□□□ -0.36
ZNF408-203ENST00000527008 CSF1RP07333 972 aa12.83□□□□□ -0.36
ZNF408-203ENST00000527008 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
ZNF408-203ENST00000527008 KIAA2012Q0VF49 1180 aa12.83□□□□□ -0.36
ZNF408-203ENST00000527008 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
ZNF408-203ENST00000527008 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
ZNF408-203ENST00000527008 L3MBTL3Q96JM7 780 aaPredicted RBP12.83□□□□□ -0.36
ZNF408-203ENST00000527008 IQCA1LA6NCM1 817 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 POTECB2RU33 542 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 ITGA6P23229 1130 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 IGHMBP2P38935 993 aaKnown RBP12.82□□□□□ -0.36
ZNF408-203ENST00000527008 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
ZNF408-203ENST00000527008 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 GPC2Q8N158 579 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 EYA3Q99504 573 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 ZNRF3Q9ULT6 936 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 ZBED9Q6R2W3 1325 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 LTBP1Q14766 1721 aa12.82□□□□□ -0.36
ZNF408-203ENST00000527008 UFL1O94874 794 aa12.81□□□□□ -0.36
ZNF408-203ENST00000527008 APLP1P51693 650 aa12.81□□□□□ -0.36
ZNF408-203ENST00000527008 FOXO4P98177 505 aa12.81□□□□□ -0.36
ZNF408-203ENST00000527008 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
ZNF408-203ENST00000527008 API5Q9BZZ5 524 aaKnown RBP12.81□□□□□ -0.36
ZNF408-203ENST00000527008 BSDC1Q9NW68 430 aaPredicted RBP12.81□□□□□ -0.36
ZNF408-203ENST00000527008 POLLQ9UGP5 575 aa12.81□□□□□ -0.36
ZNF408-203ENST00000527008 GGA1Q9UJY5 639 aa12.81□□□□□ -0.36
ZNF408-203ENST00000527008 NOB1Q9ULX3 412 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms