RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 FBLN7Q53RD9 439 aa9.37□□□□□ -0.91
C11orf54-203ENST00000526335 BTLAQ7Z6A9 289 aa9.37□□□□□ -0.91
C11orf54-203ENST00000526335 CCER1Q8TC90 406 aaPredicted RBP9.37□□□□□ -0.91
C11orf54-203ENST00000526335 DEPDC4Q8N2C3 294 aa9.37□□□□□ -0.91
C11orf54-203ENST00000526335 UBL7Q96S82 380 aaPredicted RBP9.37□□□□□ -0.91
C11orf54-203ENST00000526335 USP17L5A8MUK1 530 aa9.36□□□□□ -0.91
C11orf54-203ENST00000526335 TTC9Q92623 222 aa9.36□□□□□ -0.91
C11orf54-203ENST00000526335 CHMP3Q9Y3E7 222 aa9.36□□□□□ -0.91
C11orf54-203ENST00000526335 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
C11orf54-203ENST00000526335 TRIM50Q86XT4 487 aa9.35□□□□□ -0.91
C11orf54-203ENST00000526335 RNF43Q68DV7 783 aa9.34□□□□□ -0.91
C11orf54-203ENST00000526335 TRIM42Q8IWZ5 723 aa9.34□□□□□ -0.91
C11orf54-203ENST00000526335 DBNDD2Q9BQY9 259 aa9.34□□□□□ -0.91
C11orf54-203ENST00000526335 SMG9Q9H0W8 520 aaKnown RBP9.34□□□□□ -0.91
C11orf54-203ENST00000526335 C7orf69Q9H7B7 122 aa9.34□□□□□ -0.91
C11orf54-203ENST00000526335 ZBTB42B2RXF5 422 aa9.33□□□□□ -0.92
C11orf54-203ENST00000526335 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
C11orf54-203ENST00000526335 ARMC10Q8N2F6 343 aa9.32□□□□□ -0.92
C11orf54-203ENST00000526335 TPCN2Q8NHX9 752 aa9.32□□□□□ -0.92
C11orf54-203ENST00000526335 HMX2A2RU54 273 aa9.31□□□□□ -0.92
C11orf54-203ENST00000526335 RAD21O60216 631 aa9.31□□□□□ -0.92
C11orf54-203ENST00000526335 ATP1A2P50993 1020 aa9.31□□□□□ -0.92
C11orf54-203ENST00000526335 HIRAP54198 1017 aaPredicted RBP9.3□□□□□ -0.92
C11orf54-203ENST00000526335 CCDC102BQ68D86 513 aa9.3□□□□□ -0.92
C11orf54-203ENST00000526335 DHX32Q7L7V1 743 aaKnown RBP9.3□□□□□ -0.92
C11orf54-203ENST00000526335 TRPM4Q8TD43 1214 aa9.3□□□□□ -0.92
C11orf54-203ENST00000526335 UTP4Q969X6 686 aaKnown RBP9.3□□□□□ -0.92
C11orf54-203ENST00000526335 POM121Q96HA1 1249 aa9.3□□□□□ -0.92
C11orf54-203ENST00000526335 MAP3K6O95382 1288 aa9.29□□□□□ -0.92
C11orf54-203ENST00000526335 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.29□□□□□ -0.92
C11orf54-203ENST00000526335 DCAF11Q8TEB1 546 aa9.29□□□□□ -0.92
C11orf54-203ENST00000526335 ANGEL1Q9UNK9 670 aaKnown RBP9.29□□□□□ -0.92
C11orf54-203ENST00000526335 HFE2Q6ZVN8 426 aa9.28□□□□□ -0.92
C11orf54-203ENST00000526335 KRT25Q7Z3Z0 450 aa9.28□□□□□ -0.92
C11orf54-203ENST00000526335 PLEKHM2Q8IWE5 1019 aa9.28□□□□□ -0.92
C11orf54-203ENST00000526335 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
C11orf54-203ENST00000526335 TSPAN10Q9H1Z9 355 aaPredicted RBP9.28□□□□□ -0.92
C11orf54-203ENST00000526335 KIAA1024Q9UPX6 916 aa9.28□□□□□ -0.92
C11orf54-203ENST00000526335 USP17L3A6NCW0 530 aa9.27□□□□□ -0.93
C11orf54-203ENST00000526335 USP17L4A6NCW7 530 aa9.27□□□□□ -0.93
C11orf54-203ENST00000526335 ZBTB7BO15156 539 aaPredicted RBP9.27□□□□□ -0.93
C11orf54-203ENST00000526335 USP17L2Q6R6M4 530 aa9.27□□□□□ -0.93
C11orf54-203ENST00000526335 SPOCD1Q6ZMY3 1216 aa9.27□□□□□ -0.93
C11orf54-203ENST00000526335 USP17L1Q7RTZ2 530 aa9.27□□□□□ -0.93
C11orf54-203ENST00000526335 CEP41Q9BYV8 373 aa9.27□□□□□ -0.93
C11orf54-203ENST00000526335 EIF2AK2P19525 551 aaKnown RBP9.26□□□□□ -0.93
C11orf54-203ENST00000526335 SETDB1Q15047 1291 aa9.26□□□□□ -0.93
C11orf54-203ENST00000526335 HIF1AQ16665 826 aa9.26□□□□□ -0.93
C11orf54-203ENST00000526335 GDF6Q6KF10 455 aaPredicted RBP9.26□□□□□ -0.93
C11orf54-203ENST00000526335 IL22RA1Q8N6P7 574 aa9.26□□□□□ -0.93
C11orf54-203ENST00000526335 SRA1Q9HD15 236 aaKnown RBP9.26□□□□□ -0.93
C11orf54-203ENST00000526335 POM121CA8CG34 1229 aa9.25□□□□□ -0.93
C11orf54-203ENST00000526335 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
C11orf54-203ENST00000526335 CLDN10P78369 228 aa9.25□□□□□ -0.93
C11orf54-203ENST00000526335 GPLD1P80108 840 aa9.25□□□□□ -0.93
C11orf54-203ENST00000526335 ZNF124Q15973 351 aa9.25□□□□□ -0.93
C11orf54-203ENST00000526335 ZNF648Q5T619 568 aaPredicted RBP9.25□□□□□ -0.93
C11orf54-203ENST00000526335 ZFATQ9P243 1243 aa9.25□□□□□ -0.93
C11orf54-203ENST00000526335 KRTAP9-7A8MTY7 169 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 CBLL1Q75N03 491 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 MAP4K3Q8IVH8 894 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 ALDH16A1Q8IZ83 802 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 LARGE2Q8N3Y3 721 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 OGFOD1Q8N543 542 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 ADAMTS19Q8TE59 1207 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 RBM19Q9Y4C8 960 aaKnown RBP9.24□□□□□ -0.93
C11orf54-203ENST00000526335 PALM3A6NDB9 673 aaPredicted RBP9.24□□□□□ -0.93
C11orf54-203ENST00000526335 DBX1A6NMT0 343 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 M0R2N6 131 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 ATP9BO43861 1147 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 JUNBP17275 347 aaPredicted RBP9.24□□□□□ -0.93
C11orf54-203ENST00000526335 UBTFP17480 764 aaKnown RBP9.24□□□□□ -0.93
C11orf54-203ENST00000526335 UVSSAQ2YD98 709 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 LCE5AQ5TCM9 118 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 POTEAQ6S8J7 498 aa9.24□□□□□ -0.93
C11orf54-203ENST00000526335 PPP1R12BO60237 982 aaPredicted RBP9.23□□□□□ -0.93
C11orf54-203ENST00000526335 TARSP26639 723 aaKnown RBP9.23□□□□□ -0.93
C11orf54-203ENST00000526335 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
C11orf54-203ENST00000526335 MKRN1Q9UHC7 482 aaKnown RBP9.23□□□□□ -0.93
C11orf54-203ENST00000526335 WDR64B1ANS9 1081 aa9.22□□□□□ -0.93
C11orf54-203ENST00000526335 ITGB5P18084 799 aa9.22□□□□□ -0.93
C11orf54-203ENST00000526335 PLD4Q96BZ4 506 aa9.22□□□□□ -0.93
C11orf54-203ENST00000526335 UCN2Q96RP3 112 aa9.22□□□□□ -0.93
C11orf54-203ENST00000526335 RARAP10276 462 aa9.21□□□□□ -0.94
C11orf54-203ENST00000526335 EPB42P16452 691 aa9.21□□□□□ -0.94
C11orf54-203ENST00000526335 FLIIQ13045 1269 aa9.21□□□□□ -0.94
C11orf54-203ENST00000526335 ACAD11Q709F0 780 aa9.21□□□□□ -0.94
C11orf54-203ENST00000526335 CLEC10AQ8IUN9 316 aa9.21□□□□□ -0.94
C11orf54-203ENST00000526335 TSEN2Q8NCE0 465 aaKnown RBP9.21□□□□□ -0.94
C11orf54-203ENST00000526335 NGLY1Q96IV0 654 aa9.21□□□□□ -0.94
C11orf54-203ENST00000526335 ZNF594Q96JF6 807 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-203ENST00000526335 ARID4AP29374 1257 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-203ENST00000526335 TP53INP2Q8IXH6 220 aa9.2□□□□□ -0.94
C11orf54-203ENST00000526335 SIX5Q8N196 739 aa9.2□□□□□ -0.94
C11orf54-203ENST00000526335 IFT43Q96FT9 208 aa9.2□□□□□ -0.94
C11orf54-203ENST00000526335 FAM46AQ96IP4 442 aaKnown RBP9.2□□□□□ -0.94
C11orf54-203ENST00000526335 MYRFLQ96LU7 910 aa9.2□□□□□ -0.94
C11orf54-203ENST00000526335 WISP1O95388 367 aa9.19□□□□□ -0.94
C11orf54-203ENST00000526335 IER5Q5VY09 327 aa9.19□□□□□ -0.94
C11orf54-203ENST00000526335 FAM83CQ9BQN1 747 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms