RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CTSWP56202 376 aa16.31■□□□□ 0.2
SMPD1-202ENST00000526280 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
SMPD1-202ENST00000526280 TTLL11Q8NHH1 800 aa16.31■□□□□ 0.2
SMPD1-202ENST00000526280 SLX4Q8IY92 1834 aa16.31■□□□□ 0.2
SMPD1-202ENST00000526280 UTRNP46939 3433 aa16.31■□□□□ 0.2
SMPD1-202ENST00000526280 ARFGEF1Q9Y6D6 1849 aa16.3■□□□□ 0.2
SMPD1-202ENST00000526280 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
SMPD1-202ENST00000526280 DZIP1LQ8IYY4 767 aaKnown RBP16.3■□□□□ 0.2
SMPD1-202ENST00000526280 C7orf43Q8WVR3 580 aa16.3■□□□□ 0.2
SMPD1-202ENST00000526280 CSF1RP07333 972 aa16.29■□□□□ 0.2
SMPD1-202ENST00000526280 FOXO4P98177 505 aa16.29■□□□□ 0.2
SMPD1-202ENST00000526280 FTSJ3Q8IY81 847 aaKnown RBP16.29■□□□□ 0.2
SMPD1-202ENST00000526280 TMEM57Q8N5G2 664 aa16.29■□□□□ 0.2
SMPD1-202ENST00000526280 MYH3P11055 1940 aa16.29■□□□□ 0.2
SMPD1-202ENST00000526280 C21orf2O43822 256 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 PLIN1O60240 522 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 BBOX1O75936 387 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 RLBP1P12271 317 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 GRAPQ13588 217 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 GRAPLQ8TC17 118 aaPredicted RBP16.28■□□□□ 0.2
SMPD1-202ENST00000526280 KAZALD1Q96I82 304 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 SUCLG2Q96I99 432 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 CCDC85AQ96PX6 553 aaPredicted RBP16.28■□□□□ 0.2
SMPD1-202ENST00000526280 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
SMPD1-202ENST00000526280 CACNA1SQ13698 1873 aa16.27■□□□□ 0.2
SMPD1-202ENST00000526280 MS4A1P11836 297 aa16.27■□□□□ 0.2
SMPD1-202ENST00000526280 GREM2Q9H772 168 aa16.27■□□□□ 0.2
SMPD1-202ENST00000526280 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.2
SMPD1-202ENST00000526280 ZNF219Q9P2Y4 722 aaPredicted RBP16.27■□□□□ 0.2
SMPD1-202ENST00000526280 TAF1P21675 1872 aa16.27■□□□□ 0.19
SMPD1-202ENST00000526280 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-202ENST00000526280 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
SMPD1-202ENST00000526280 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
SMPD1-202ENST00000526280 LMBR1LQ6UX01 489 aa16.26■□□□□ 0.19
SMPD1-202ENST00000526280 ARHGAP27Q6ZUM4 889 aa16.26■□□□□ 0.19
SMPD1-202ENST00000526280 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.26■□□□□ 0.19
SMPD1-202ENST00000526280 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
SMPD1-202ENST00000526280 CELF1Q92879 486 aaKnown RBP16.26■□□□□ 0.19
SMPD1-202ENST00000526280 MEIS3Q99687 375 aa16.26■□□□□ 0.19
SMPD1-202ENST00000526280 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
SMPD1-202ENST00000526280 UBTFL1P0CB47 393 aaPredicted RBP16.25■□□□□ 0.19
SMPD1-202ENST00000526280 OLFM4Q6UX06 510 aa16.25■□□□□ 0.19
SMPD1-202ENST00000526280 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
SMPD1-202ENST00000526280 HDAC5Q9UQL6 1122 aa16.25■□□□□ 0.19
SMPD1-202ENST00000526280 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
SMPD1-202ENST00000526280 GNAI3P08754 354 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 ITGA6P23229 1130 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 FAM161AQ3B820 660 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
SMPD1-202ENST00000526280 CC2D2BQ6DHV5 1058 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 TMC4Q7Z404 712 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 ANKRD44Q8N8A2 993 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 COL4A1P02462 1669 aa16.24■□□□□ 0.19
SMPD1-202ENST00000526280 PDE3AQ14432 1141 aa16.23■□□□□ 0.19
SMPD1-202ENST00000526280 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
SMPD1-202ENST00000526280 ITPRIPQ8IWB1 547 aa16.23■□□□□ 0.19
SMPD1-202ENST00000526280 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
SMPD1-202ENST00000526280 CDC5LQ99459 802 aaKnown RBP16.23■□□□□ 0.19
SMPD1-202ENST00000526280 ANKRD18BA2A2Z9 1011 aa16.22■□□□□ 0.19
SMPD1-202ENST00000526280 ZBTB7BO15156 539 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-202ENST00000526280 IFIT5Q13325 482 aaKnown RBP16.22■□□□□ 0.19
SMPD1-202ENST00000526280 GRIPAP1Q4V328 841 aa16.22■□□□□ 0.19
SMPD1-202ENST00000526280 SLC51AQ86UW1 340 aa16.22■□□□□ 0.19
SMPD1-202ENST00000526280 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
SMPD1-202ENST00000526280 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
SMPD1-202ENST00000526280 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
SMPD1-202ENST00000526280 SNED1Q8TER0 1413 aa16.22■□□□□ 0.19
SMPD1-202ENST00000526280 FER1L6Q2WGJ9 1857 aa16.21■□□□□ 0.19
SMPD1-202ENST00000526280 NFKBIEO00221 500 aa16.21■□□□□ 0.19
SMPD1-202ENST00000526280 CCDC57Q2TAC2 916 aa16.21■□□□□ 0.19
SMPD1-202ENST00000526280 C20orf194Q5TEA3 1177 aa16.21■□□□□ 0.19
SMPD1-202ENST00000526280 LRRFIP2Q9Y608 721 aaKnown RBP16.21■□□□□ 0.19
SMPD1-202ENST00000526280 LTBP3Q9NS15 1303 aa16.21■□□□□ 0.19
SMPD1-202ENST00000526280 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
SMPD1-202ENST00000526280 RRP1P56182 461 aaKnown RBP16.2■□□□□ 0.18
SMPD1-202ENST00000526280 MVPQ14764 893 aaKnown RBP16.2■□□□□ 0.18
SMPD1-202ENST00000526280 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
SMPD1-202ENST00000526280 GNAI2P04899 355 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 FKBP4Q02790 459 aaKnown RBP eCLIP16.19■□□□□ 0.18
SMPD1-202ENST00000526280 RASSF7Q02833 373 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 PSMD1Q99460 953 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 TAOK3Q9H2K8 898 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 PRELPP51888 382 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 MPNDQ8N594 471 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 DDX19BQ9UMR2 479 aa16.19■□□□□ 0.18
SMPD1-202ENST00000526280 CHD4Q14839 1912 aa16.18■□□□□ 0.18
SMPD1-202ENST00000526280 LRRC37AA6NMS7 1700 aa16.18■□□□□ 0.18
SMPD1-202ENST00000526280 LMNB1P20700 586 aa16.18■□□□□ 0.18
SMPD1-202ENST00000526280 ZNF784Q8NCA9 323 aaPredicted RBP16.18■□□□□ 0.18
SMPD1-202ENST00000526280 ZNF594Q96JF6 807 aaPredicted RBP16.18■□□□□ 0.18
SMPD1-202ENST00000526280 MPHOSPH8Q99549 860 aa16.18■□□□□ 0.18
SMPD1-202ENST00000526280 RTFDC1Q9BY42 306 aaPredicted RBP16.18■□□□□ 0.18
SMPD1-202ENST00000526280 MINPP1Q9UNW1 487 aa16.18■□□□□ 0.18
SMPD1-202ENST00000526280 SBF1O95248 1867 aa16.18■□□□□ 0.18
SMPD1-202ENST00000526280 RFX5P48382 616 aaPredicted RBP16.17■□□□□ 0.18
SMPD1-202ENST00000526280 GPSM2P81274 684 aa16.17■□□□□ 0.18
SMPD1-202ENST00000526280 TAF7LQ5H9L4 462 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms