RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 RTL5Q5HYW3 569 aaPredicted RBP21.87■■□□□ 1.09
LMX1B-203ENST00000526117 GRAPLQ8TC17 118 aaPredicted RBP21.87■■□□□ 1.09
LMX1B-203ENST00000526117 NOB1Q9ULX3 412 aaKnown RBP21.87■■□□□ 1.09
LMX1B-203ENST00000526117 LRRC37AA6NMS7 1700 aa21.86■■□□□ 1.09
LMX1B-203ENST00000526117 GRM8O00222 908 aa21.86■■□□□ 1.09
LMX1B-203ENST00000526117 CTSWP56202 376 aa21.86■■□□□ 1.09
LMX1B-203ENST00000526117 CCDC152Q4G0S7 254 aa21.86■■□□□ 1.09
LMX1B-203ENST00000526117 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
LMX1B-203ENST00000526117 RTKN2Q8IZC4 609 aa21.86■■□□□ 1.09
LMX1B-203ENST00000526117 NFKBIEO00221 500 aa21.85■■□□□ 1.09
LMX1B-203ENST00000526117 PPEF1O14829 653 aaPredicted RBP21.85■■□□□ 1.09
LMX1B-203ENST00000526117 IPO8O15397 1037 aaKnown RBP21.85■■□□□ 1.09
LMX1B-203ENST00000526117 SBF1O95248 1867 aa21.84■■□□□ 1.09
LMX1B-203ENST00000526117 CCT4P50991 539 aaKnown RBP21.84■■□□□ 1.09
LMX1B-203ENST00000526117 TTLL11Q8NHH1 800 aa21.84■■□□□ 1.09
LMX1B-203ENST00000526117 ATP6V0A2Q9Y487 856 aa21.84■■□□□ 1.09
LMX1B-203ENST00000526117 ZC3H4Q9UPT8 1303 aaKnown RBP21.83■■□□□ 1.09
LMX1B-203ENST00000526117 CSF1RP07333 972 aa21.83■■□□□ 1.09
LMX1B-203ENST00000526117 PSMD1Q99460 953 aa21.83■■□□□ 1.09
LMX1B-203ENST00000526117 BCAR3O75815 825 aa21.82■■□□□ 1.08
LMX1B-203ENST00000526117 LMNB1P20700 586 aa21.82■■□□□ 1.08
LMX1B-203ENST00000526117 ATF7IPQ6VMQ6 1270 aa21.82■■□□□ 1.08
LMX1B-203ENST00000526117 SP8Q8IXZ3 490 aa21.82■■□□□ 1.08
LMX1B-203ENST00000526117 JARID2Q92833 1246 aaPredicted RBP21.82■■□□□ 1.08
LMX1B-203ENST00000526117 TAOK3Q9H2K8 898 aa21.82■■□□□ 1.08
LMX1B-203ENST00000526117 C9orf78Q9NZ63 289 aaPredicted RBP21.82■■□□□ 1.08
LMX1B-203ENST00000526117 FKBP4Q02790 459 aaKnown RBP eCLIP21.81■■□□□ 1.08
LMX1B-203ENST00000526117 INTS3Q68E01 1043 aaKnown RBP21.8■■□□□ 1.08
LMX1B-203ENST00000526117 COL4A1P02462 1669 aa21.79■■□□□ 1.08
LMX1B-203ENST00000526117 DICER1Q9UPY3 1922 aaKnown RBP21.79■■□□□ 1.08
LMX1B-203ENST00000526117 TRIM27P14373 513 aa21.79■■□□□ 1.08
LMX1B-203ENST00000526117 RPS8P62241 208 aaKnown RBP21.79■■□□□ 1.08
LMX1B-203ENST00000526117 FOXO4P98177 505 aa21.79■■□□□ 1.08
LMX1B-203ENST00000526117 RASSF7Q02833 373 aa21.79■■□□□ 1.08
LMX1B-203ENST00000526117 CELF1Q92879 486 aaKnown RBP21.79■■□□□ 1.08
LMX1B-203ENST00000526117 USP44Q9H0E7 712 aa21.79■■□□□ 1.08
LMX1B-203ENST00000526117 TMX4Q9H1E5 349 aaPredicted RBP21.79■■□□□ 1.08
LMX1B-203ENST00000526117 TAF1P21675 1872 aa21.78■■□□□ 1.08
LMX1B-203ENST00000526117 PRELPP51888 382 aa21.78■■□□□ 1.08
LMX1B-203ENST00000526117 C9orf131Q5VYM1 1079 aa21.78■■□□□ 1.08
LMX1B-203ENST00000526117 CDC5LQ99459 802 aaKnown RBP21.78■■□□□ 1.08
LMX1B-203ENST00000526117 RTFDC1Q9BY42 306 aaPredicted RBP21.78■■□□□ 1.08
LMX1B-203ENST00000526117 VPS33BQ9H267 617 aa21.78■■□□□ 1.08
LMX1B-203ENST00000526117 ZNF219Q9P2Y4 722 aaPredicted RBP21.78■■□□□ 1.08
LMX1B-203ENST00000526117 LTBP1Q14766 1721 aa21.77■■□□□ 1.08
LMX1B-203ENST00000526117 NBPF7P0C2Y1 421 aaPredicted RBP21.77■■□□□ 1.08
LMX1B-203ENST00000526117 ZKSCAN2Q63HK3 967 aa21.77■■□□□ 1.08
LMX1B-203ENST00000526117 OLFM4Q6UX06 510 aa21.77■■□□□ 1.08
LMX1B-203ENST00000526117 GREM2Q9H772 168 aa21.77■■□□□ 1.08
LMX1B-203ENST00000526117 SEC31BQ9NQW1 1179 aa21.77■■□□□ 1.08
LMX1B-203ENST00000526117 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
LMX1B-203ENST00000526117 RNF181Q9P0P0 153 aa21.76■■□□□ 1.07
LMX1B-203ENST00000526117 RABL6Q3YEC7 729 aaPredicted RBP21.75■■□□□ 1.07
LMX1B-203ENST00000526117 ANKRD18AQ8IVF6 992 aa21.75■■□□□ 1.07
LMX1B-203ENST00000526117 FRAT1Q92837 279 aaPredicted RBP21.75■■□□□ 1.07
LMX1B-203ENST00000526117 KAZALD1Q96I82 304 aa21.75■■□□□ 1.07
LMX1B-203ENST00000526117 DUOX1Q9NRD9 1551 aa21.74■■□□□ 1.07
LMX1B-203ENST00000526117 SUPT20HQ8NEM7 779 aa21.74■■□□□ 1.07
LMX1B-203ENST00000526117 SUCLG2Q96I99 432 aa21.74■■□□□ 1.07
LMX1B-203ENST00000526117 BSDC1Q9NW68 430 aaPredicted RBP21.74■■□□□ 1.07
LMX1B-203ENST00000526117 PODXL2Q9NZ53 605 aa21.74■■□□□ 1.07
LMX1B-203ENST00000526117 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
LMX1B-203ENST00000526117 CCDC88AQ3V6T2 1871 aa21.73■■□□□ 1.07
LMX1B-203ENST00000526117 ITGA6P23229 1130 aa21.73■■□□□ 1.07
LMX1B-203ENST00000526117 FAM161AQ3B820 660 aa21.73■■□□□ 1.07
LMX1B-203ENST00000526117 EPHA10Q5JZY3 1008 aa21.73■■□□□ 1.07
LMX1B-203ENST00000526117 RCAN3Q9UKA8 241 aa21.73■■□□□ 1.07
LMX1B-203ENST00000526117 LMBR1LQ6UX01 489 aa21.72■■□□□ 1.07
LMX1B-203ENST00000526117 MPNDQ8N594 471 aa21.72■■□□□ 1.07
LMX1B-203ENST00000526117 ANKRD18BA2A2Z9 1011 aa21.71■■□□□ 1.07
LMX1B-203ENST00000526117 IARSP41252 1262 aaKnown RBP21.71■■□□□ 1.07
LMX1B-203ENST00000526117 IFIT5Q13325 482 aaKnown RBP21.71■■□□□ 1.07
LMX1B-203ENST00000526117 DPP8Q6V1X1 898 aaPredicted RBP21.71■■□□□ 1.07
LMX1B-203ENST00000526117 ZNF784Q8NCA9 323 aaPredicted RBP21.71■■□□□ 1.07
LMX1B-203ENST00000526117 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
LMX1B-203ENST00000526117 IGHMBP2P38935 993 aaKnown RBP21.7■■□□□ 1.06
LMX1B-203ENST00000526117 SLC51AQ86UW1 340 aa21.7■■□□□ 1.06
LMX1B-203ENST00000526117 BICC1Q9H694 974 aaKnown RBP21.7■■□□□ 1.06
LMX1B-203ENST00000526117 ZNF277Q9NRM2 450 aaPredicted RBP21.7■■□□□ 1.06
LMX1B-203ENST00000526117 GNAI3P08754 354 aa21.69■■□□□ 1.06
LMX1B-203ENST00000526117 UBTFL1P0CB47 393 aaPredicted RBP21.69■■□□□ 1.06
LMX1B-203ENST00000526117 MS4A1P11836 297 aa21.69■■□□□ 1.06
LMX1B-203ENST00000526117 DZIP1LQ8IYY4 767 aaKnown RBP21.69■■□□□ 1.06
LMX1B-203ENST00000526117 ANKRD44Q8N8A2 993 aa21.69■■□□□ 1.06
LMX1B-203ENST00000526117 CCDC57Q2TAC2 916 aa21.68■■□□□ 1.06
LMX1B-203ENST00000526117 TNNQ9UQP3 1299 aa21.68■■□□□ 1.06
LMX1B-203ENST00000526117 SPEF2Q9C093 1822 aa21.67■■□□□ 1.06
LMX1B-203ENST00000526117 XDHP47989 1333 aa21.67■■□□□ 1.06
LMX1B-203ENST00000526117 GPSM2P81274 684 aa21.67■■□□□ 1.06
LMX1B-203ENST00000526117 KIAA2012Q0VF49 1180 aa21.67■■□□□ 1.06
LMX1B-203ENST00000526117 FTSJ3Q8IY81 847 aaKnown RBP21.67■■□□□ 1.06
LMX1B-203ENST00000526117 MINPP1Q9UNW1 487 aa21.67■■□□□ 1.06
LMX1B-203ENST00000526117 FZD9O00144 591 aa21.66■■□□□ 1.06
LMX1B-203ENST00000526117 TMEM57Q8N5G2 664 aa21.66■■□□□ 1.06
LMX1B-203ENST00000526117 CLUAP1Q96AJ1 413 aa21.66■■□□□ 1.06
LMX1B-203ENST00000526117 MPHOSPH8Q99549 860 aa21.66■■□□□ 1.06
LMX1B-203ENST00000526117 MEIS3Q99687 375 aa21.66■■□□□ 1.06
LMX1B-203ENST00000526117 NSFL1CQ9UNZ2 370 aaKnown RBP21.66■■□□□ 1.06
LMX1B-203ENST00000526117 COL4A5P29400 1685 aa21.66■■□□□ 1.06
LMX1B-203ENST00000526117 TBC1D16Q8TBP0 767 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms