RNA–Protein interactions for RNA: ENST00000525852.3

CTTN-210, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,470 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-210ENST00000525852 KIF16BQ96L93 1317 aa15.61■□□□□ 0.09
CTTN-210ENST00000525852 PDE8AO60658 829 aa15.61■□□□□ 0.09
CTTN-210ENST00000525852 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
CTTN-210ENST00000525852 HSP90B1P14625 803 aaKnown RBP15.6■□□□□ 0.09
CTTN-210ENST00000525852 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
CTTN-210ENST00000525852 CELF1Q92879 486 aaKnown RBP15.6■□□□□ 0.09
CTTN-210ENST00000525852 GRM8O00222 908 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 CTSWP56202 376 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 GRAPQ13588 217 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 C9orf131Q5VYM1 1079 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 GRAPLQ8TC17 118 aaPredicted RBP15.59■□□□□ 0.09
CTTN-210ENST00000525852 ARHGAP45Q92619 1136 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 FRAT1Q92837 279 aaPredicted RBP15.59■□□□□ 0.09
CTTN-210ENST00000525852 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
CTTN-210ENST00000525852 SEC31BQ9NQW1 1179 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 SPEF2Q9C093 1822 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 CCDC93Q567U6 631 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 PLA2G12BQ9BX93 195 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 TAOK3Q9H2K8 898 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 C9orf78Q9NZ63 289 aaPredicted RBP15.59■□□□□ 0.09
CTTN-210ENST00000525852 TNNQ9UQP3 1299 aa15.59■□□□□ 0.09
CTTN-210ENST00000525852 LRRC37AA6NMS7 1700 aa15.58■□□□□ 0.09
CTTN-210ENST00000525852 TIAM2Q8IVF5 1701 aa15.58■□□□□ 0.09
CTTN-210ENST00000525852 DICER1Q9UPY3 1922 aaKnown RBP15.58■□□□□ 0.08
CTTN-210ENST00000525852 TRIM27P14373 513 aa15.58■□□□□ 0.08
CTTN-210ENST00000525852 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.08
CTTN-210ENST00000525852 SOGA3Q5TF21 947 aa15.58■□□□□ 0.08
CTTN-210ENST00000525852 RNF181Q9P0P0 153 aa15.58■□□□□ 0.08
CTTN-210ENST00000525852 IPO8O15397 1037 aaKnown RBP15.57■□□□□ 0.08
CTTN-210ENST00000525852 BBOX1O75936 387 aa15.57■□□□□ 0.08
CTTN-210ENST00000525852 NBPF7P0C2Y1 421 aaPredicted RBP15.57■□□□□ 0.08
CTTN-210ENST00000525852 EPHA10Q5JZY3 1008 aa15.57■□□□□ 0.08
CTTN-210ENST00000525852 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
CTTN-210ENST00000525852 GREM2Q9H772 168 aa15.57■□□□□ 0.08
CTTN-210ENST00000525852 ATP6V0A2Q9Y487 856 aa15.57■□□□□ 0.08
CTTN-210ENST00000525852 UTYO14607 1347 aa15.56■□□□□ 0.08
CTTN-210ENST00000525852 LTBP3Q9NS15 1303 aa15.56■□□□□ 0.08
CTTN-210ENST00000525852 LMNB1P20700 586 aa15.56■□□□□ 0.08
CTTN-210ENST00000525852 CCT4P50991 539 aaKnown RBP15.56■□□□□ 0.08
CTTN-210ENST00000525852 FOXO4P98177 505 aa15.56■□□□□ 0.08
CTTN-210ENST00000525852 ZNF784Q8NCA9 323 aaPredicted RBP15.56■□□□□ 0.08
CTTN-210ENST00000525852 USP44Q9H0E7 712 aa15.56■□□□□ 0.08
CTTN-210ENST00000525852 CSF1RP07333 972 aa15.55■□□□□ 0.08
CTTN-210ENST00000525852 FKBP4Q02790 459 aaKnown RBP eCLIP15.55■□□□□ 0.08
CTTN-210ENST00000525852 FAM161AQ3B820 660 aa15.55■□□□□ 0.08
CTTN-210ENST00000525852 RTKN2Q8IZC4 609 aa15.55■□□□□ 0.08
CTTN-210ENST00000525852 KAZALD1Q96I82 304 aa15.55■□□□□ 0.08
CTTN-210ENST00000525852 SUCLG2Q96I99 432 aa15.55■□□□□ 0.08
CTTN-210ENST00000525852 ZNF277Q9NRM2 450 aaPredicted RBP15.55■□□□□ 0.08
CTTN-210ENST00000525852 DUOX1Q9NRD9 1551 aa15.55■□□□□ 0.08
CTTN-210ENST00000525852 LTBP1Q14766 1721 aa15.54■□□□□ 0.08
CTTN-210ENST00000525852 RPS8P62241 208 aaKnown RBP15.54■□□□□ 0.08
CTTN-210ENST00000525852 ZKSCAN2Q63HK3 967 aa15.54■□□□□ 0.08
CTTN-210ENST00000525852 INTS3Q68E01 1043 aaKnown RBP15.54■□□□□ 0.08
CTTN-210ENST00000525852 CC2D2BQ6DHV5 1058 aa15.54■□□□□ 0.08
CTTN-210ENST00000525852 SP8Q8IXZ3 490 aa15.54■□□□□ 0.08
CTTN-210ENST00000525852 CLUAP1Q96AJ1 413 aa15.54■□□□□ 0.08
CTTN-210ENST00000525852 RTL9Q8NET4 1388 aa15.54■□□□□ 0.08
CTTN-210ENST00000525852 COL4A5P29400 1685 aa15.54■□□□□ 0.08
CTTN-210ENST00000525852 RCAN3Q9UKA8 241 aa15.53■□□□□ 0.08
CTTN-210ENST00000525852 ITGA6P23229 1130 aa15.52■□□□□ 0.08
CTTN-210ENST00000525852 LMBR1LQ6UX01 489 aa15.52■□□□□ 0.08
CTTN-210ENST00000525852 TMC4Q7Z404 712 aa15.52■□□□□ 0.08
CTTN-210ENST00000525852 ZNF526Q8TF50 670 aaPredicted RBP15.52■□□□□ 0.08
CTTN-210ENST00000525852 PSMD1Q99460 953 aa15.52■□□□□ 0.08
CTTN-210ENST00000525852 ANKRD18AQ8IVF6 992 aa15.52■□□□□ 0.07
CTTN-210ENST00000525852 RLBP1P12271 317 aa15.51■□□□□ 0.07
CTTN-210ENST00000525852 GRIPAP1Q4V328 841 aa15.51■□□□□ 0.07
CTTN-210ENST00000525852 TMEM57Q8N5G2 664 aa15.51■□□□□ 0.07
CTTN-210ENST00000525852 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
CTTN-210ENST00000525852 CDC5LQ99459 802 aaKnown RBP15.51■□□□□ 0.07
CTTN-210ENST00000525852 MEIS3Q99687 375 aa15.51■□□□□ 0.07
CTTN-210ENST00000525852 TMX4Q9H1E5 349 aaPredicted RBP15.51■□□□□ 0.07
CTTN-210ENST00000525852 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
CTTN-210ENST00000525852 CHMP3Q9Y3E7 222 aa15.51■□□□□ 0.07
CTTN-210ENST00000525852 IARSP41252 1262 aaKnown RBP15.5■□□□□ 0.07
CTTN-210ENST00000525852 GPSM2P81274 684 aa15.5■□□□□ 0.07
CTTN-210ENST00000525852 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
CTTN-210ENST00000525852 MPNDQ8N594 471 aa15.5■□□□□ 0.07
CTTN-210ENST00000525852 RABL6Q3YEC7 729 aaPredicted RBP15.49■□□□□ 0.07
CTTN-210ENST00000525852 DZIP1LQ8IYY4 767 aaKnown RBP15.49■□□□□ 0.07
CTTN-210ENST00000525852 RTFDC1Q9BY42 306 aaPredicted RBP15.49■□□□□ 0.07
CTTN-210ENST00000525852 BSDC1Q9NW68 430 aaPredicted RBP15.49■□□□□ 0.07
CTTN-210ENST00000525852 NSFL1CQ9UNZ2 370 aaKnown RBP15.49■□□□□ 0.07
CTTN-210ENST00000525852 A0A1B0GUL6 1792 aa15.49■□□□□ 0.07
CTTN-210ENST00000525852 ANKRD18BA2A2Z9 1011 aa15.48■□□□□ 0.07
CTTN-210ENST00000525852 PLIN1O60240 522 aa15.48■□□□□ 0.07
CTTN-210ENST00000525852 UBTFL1P0CB47 393 aaPredicted RBP15.48■□□□□ 0.07
CTTN-210ENST00000525852 IFIT5Q13325 482 aaKnown RBP15.48■□□□□ 0.07
CTTN-210ENST00000525852 FTSJ3Q8IY81 847 aaKnown RBP15.48■□□□□ 0.07
CTTN-210ENST00000525852 GPR101Q96P66 508 aaPredicted RBP15.48■□□□□ 0.07
CTTN-210ENST00000525852 POLLQ9UGP5 575 aa15.48■□□□□ 0.07
CTTN-210ENST00000525852 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
CTTN-210ENST00000525852 IGHMBP2P38935 993 aaKnown RBP15.47■□□□□ 0.07
CTTN-210ENST00000525852 AOC3Q16853 763 aa15.47■□□□□ 0.07
CTTN-210ENST00000525852 PANK1Q8TE04 598 aa15.47■□□□□ 0.07
CTTN-210ENST00000525852 ZNF594Q96JF6 807 aaPredicted RBP15.47■□□□□ 0.07
CTTN-210ENST00000525852 ZC3H4Q9UPT8 1303 aaKnown RBP15.47■□□□□ 0.07
CTTN-210ENST00000525852 PPIP5K2O43314 1243 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms