RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 PSMD1Q99460 953 aa18.32■□□□□ 0.52
LRRK1-204ENST00000525617 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
LRRK1-204ENST00000525617 F6X3S4 739 aa18.31■□□□□ 0.52
LRRK1-204ENST00000525617 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
LRRK1-204ENST00000525617 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
LRRK1-204ENST00000525617 GCKRQ14397 625 aa18.31■□□□□ 0.52
LRRK1-204ENST00000525617 CCDC152Q4G0S7 254 aa18.31■□□□□ 0.52
LRRK1-204ENST00000525617 ZNF277Q9NRM2 450 aaPredicted RBP18.31■□□□□ 0.52
LRRK1-204ENST00000525617 GLTPD2A6NH11 291 aa18.3■□□□□ 0.52
LRRK1-204ENST00000525617 UBE3BQ7Z3V4 1068 aa18.3■□□□□ 0.52
LRRK1-204ENST00000525617 H7C1W4 665 aa18.29■□□□□ 0.52
LRRK1-204ENST00000525617 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
LRRK1-204ENST00000525617 ALDH1L2Q3SY69 923 aa18.29■□□□□ 0.52
LRRK1-204ENST00000525617 MRPL50Q8N5N7 158 aaKnown RBP18.29■□□□□ 0.52
LRRK1-204ENST00000525617 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
LRRK1-204ENST00000525617 SSH1Q8WYL5 1049 aa18.29■□□□□ 0.52
LRRK1-204ENST00000525617 RPS8P62241 208 aaKnown RBP18.28■□□□□ 0.52
LRRK1-204ENST00000525617 BEND3Q5T5X7 828 aa18.28■□□□□ 0.52
LRRK1-204ENST00000525617 SLC4A10Q6U841 1118 aa18.28■□□□□ 0.52
LRRK1-204ENST00000525617 DPP8Q6V1X1 898 aaPredicted RBP18.28■□□□□ 0.52
LRRK1-204ENST00000525617 MPNDQ8N594 471 aa18.28■□□□□ 0.52
LRRK1-204ENST00000525617 JDP2Q8WYK2 163 aa18.28■□□□□ 0.52
LRRK1-204ENST00000525617 CELF1Q92879 486 aaKnown RBP18.28■□□□□ 0.52
LRRK1-204ENST00000525617 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
LRRK1-204ENST00000525617 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
LRRK1-204ENST00000525617 TAF1P21675 1872 aa18.28■□□□□ 0.52
LRRK1-204ENST00000525617 PTPRCP08575 1304 aa18.27■□□□□ 0.52
LRRK1-204ENST00000525617 CTSWP56202 376 aa18.27■□□□□ 0.52
LRRK1-204ENST00000525617 C1QTNF8P60827 252 aa18.27■□□□□ 0.52
LRRK1-204ENST00000525617 C16orf71Q8IYS4 520 aaPredicted RBP18.27■□□□□ 0.52
LRRK1-204ENST00000525617 KIF3CO14782 793 aa18.26■□□□□ 0.51
LRRK1-204ENST00000525617 LARGE2Q8N3Y3 721 aa18.26■□□□□ 0.51
LRRK1-204ENST00000525617 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
LRRK1-204ENST00000525617 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
LRRK1-204ENST00000525617 SRCIN1Q9C0H9 1055 aa18.26■□□□□ 0.51
LRRK1-204ENST00000525617 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
LRRK1-204ENST00000525617 RRAGCQ9HB90 399 aa18.26■□□□□ 0.51
LRRK1-204ENST00000525617 SMC4Q9NTJ3 1288 aa18.26■□□□□ 0.51
LRRK1-204ENST00000525617 MYH3P11055 1940 aa18.25■□□□□ 0.51
LRRK1-204ENST00000525617 ALDH1L1O75891 902 aa18.25■□□□□ 0.51
LRRK1-204ENST00000525617 TTLL11Q8NHH1 800 aa18.25■□□□□ 0.51
LRRK1-204ENST00000525617 CDC5LQ99459 802 aaKnown RBP18.25■□□□□ 0.51
LRRK1-204ENST00000525617 SEC31BQ9NQW1 1179 aa18.25■□□□□ 0.51
LRRK1-204ENST00000525617 C9orf78Q9NZ63 289 aaPredicted RBP18.25■□□□□ 0.51
LRRK1-204ENST00000525617 PPIP5K2O43314 1243 aa18.24■□□□□ 0.51
LRRK1-204ENST00000525617 SLC51AQ86UW1 340 aa18.24■□□□□ 0.51
LRRK1-204ENST00000525617 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
LRRK1-204ENST00000525617 PLA2G12BQ9BX93 195 aa18.24■□□□□ 0.51
LRRK1-204ENST00000525617 RTFDC1Q9BY42 306 aaPredicted RBP18.24■□□□□ 0.51
LRRK1-204ENST00000525617 NSFL1CQ9UNZ2 370 aaKnown RBP18.24■□□□□ 0.51
LRRK1-204ENST00000525617 GRM8O00222 908 aa18.23■□□□□ 0.51
LRRK1-204ENST00000525617 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
LRRK1-204ENST00000525617 NIM1KQ8IY84 436 aa18.23■□□□□ 0.51
LRRK1-204ENST00000525617 FZD9O00144 591 aa18.22■□□□□ 0.51
LRRK1-204ENST00000525617 TOMM70O94826 608 aa18.22■□□□□ 0.51
LRRK1-204ENST00000525617 DDNO94850 711 aaPredicted RBP18.22■□□□□ 0.51
LRRK1-204ENST00000525617 CASP7P55210 303 aa18.22■□□□□ 0.51
LRRK1-204ENST00000525617 EIF6P56537 245 aaKnown RBP18.22■□□□□ 0.51
LRRK1-204ENST00000525617 AOC3Q16853 763 aa18.22■□□□□ 0.51
LRRK1-204ENST00000525617 LRRC37AA6NMS7 1700 aa18.22■□□□□ 0.51
LRRK1-204ENST00000525617 RTL9Q8NET4 1388 aa18.21■□□□□ 0.51
LRRK1-204ENST00000525617 GREM2Q9H772 168 aa18.21■□□□□ 0.51
LRRK1-204ENST00000525617 C6orf229H3BNL8 230 aa18.2■□□□□ 0.5
LRRK1-204ENST00000525617 EYA3Q99504 573 aa18.2■□□□□ 0.5
LRRK1-204ENST00000525617 ANKIB1Q9P2G1 1089 aa18.2■□□□□ 0.5
LRRK1-204ENST00000525617 CSF1RP07333 972 aa18.19■□□□□ 0.5
LRRK1-204ENST00000525617 IGHMBP2P38935 993 aaKnown RBP18.19■□□□□ 0.5
LRRK1-204ENST00000525617 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
LRRK1-204ENST00000525617 BRPF1P55201 1214 aaPredicted RBP18.19■□□□□ 0.5
LRRK1-204ENST00000525617 GPSM2P81274 684 aa18.19■□□□□ 0.5
LRRK1-204ENST00000525617 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
LRRK1-204ENST00000525617 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
LRRK1-204ENST00000525617 WDR90Q96KV7 1748 aa18.19■□□□□ 0.5
LRRK1-204ENST00000525617 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
LRRK1-204ENST00000525617 ZNF541Q9H0D2 1346 aa18.19■□□□□ 0.5
LRRK1-204ENST00000525617 IQCA1LA6NCM1 817 aa18.18■□□□□ 0.5
LRRK1-204ENST00000525617 ITGA6P23229 1130 aa18.18■□□□□ 0.5
LRRK1-204ENST00000525617 GPC2Q8N158 579 aa18.18■□□□□ 0.5
LRRK1-204ENST00000525617 API5Q9BZZ5 524 aaKnown RBP18.18■□□□□ 0.5
LRRK1-204ENST00000525617 BSDC1Q9NW68 430 aaPredicted RBP18.18■□□□□ 0.5
LRRK1-204ENST00000525617 PODXL2Q9NZ53 605 aa18.18■□□□□ 0.5
LRRK1-204ENST00000525617 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
LRRK1-204ENST00000525617 CHMP3Q9Y3E7 222 aa18.18■□□□□ 0.5
LRRK1-204ENST00000525617 COL4A1P02462 1669 aa18.18■□□□□ 0.5
LRRK1-204ENST00000525617 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
LRRK1-204ENST00000525617 ANKRD18BA2A2Z9 1011 aa18.17■□□□□ 0.5
LRRK1-204ENST00000525617 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
LRRK1-204ENST00000525617 FAM161AQ3B820 660 aa18.17■□□□□ 0.5
LRRK1-204ENST00000525617 RBM46Q8TBY0 533 aaKnown RBP18.17■□□□□ 0.5
LRRK1-204ENST00000525617 MPHOSPH8Q99549 860 aa18.17■□□□□ 0.5
LRRK1-204ENST00000525617 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
LRRK1-204ENST00000525617 FOXO4P98177 505 aa18.16■□□□□ 0.5
LRRK1-204ENST00000525617 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
LRRK1-204ENST00000525617 L3MBTL3Q96JM7 780 aaPredicted RBP18.16■□□□□ 0.5
LRRK1-204ENST00000525617 ZC3H12CQ9C0D7 883 aaKnown RBP18.16■□□□□ 0.5
LRRK1-204ENST00000525617 POLLQ9UGP5 575 aa18.16■□□□□ 0.5
LRRK1-204ENST00000525617 GGA1Q9UJY5 639 aa18.16■□□□□ 0.5
LRRK1-204ENST00000525617 GJA3Q9Y6H8 435 aa18.16■□□□□ 0.5
LRRK1-204ENST00000525617 XDHP47989 1333 aa18.16■□□□□ 0.5
LRRK1-204ENST00000525617 COL4A5P29400 1685 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms