RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 NBPF7P0C2Y1 421 aaPredicted RBP15.58■□□□□ 0.08
CCS-202ENST00000525435 GRAPQ13588 217 aa15.58■□□□□ 0.08
CCS-202ENST00000525435 FTSJ3Q8IY81 847 aaKnown RBP15.58■□□□□ 0.08
CCS-202ENST00000525435 GRAPLQ8TC17 118 aaPredicted RBP15.58■□□□□ 0.08
CCS-202ENST00000525435 TMX4Q9H1E5 349 aaPredicted RBP15.58■□□□□ 0.08
CCS-202ENST00000525435 ANKRD31Q8N7Z5 1873 aa15.57■□□□□ 0.08
CCS-202ENST00000525435 GNAI3P08754 354 aa15.57■□□□□ 0.08
CCS-202ENST00000525435 RPS8P62241 208 aaKnown RBP15.57■□□□□ 0.08
CCS-202ENST00000525435 FOXO4P98177 505 aa15.57■□□□□ 0.08
CCS-202ENST00000525435 PDE3AQ14432 1141 aa15.57■□□□□ 0.08
CCS-202ENST00000525435 CDC5LQ99459 802 aaKnown RBP15.57■□□□□ 0.08
CCS-202ENST00000525435 KIAA1551Q9HCM1 1747 aa15.57■□□□□ 0.08
CCS-202ENST00000525435 CHD4Q14839 1912 aa15.56■□□□□ 0.08
CCS-202ENST00000525435 SP8Q8IXZ3 490 aa15.56■□□□□ 0.08
CCS-202ENST00000525435 RTKN2Q8IZC4 609 aa15.56■□□□□ 0.08
CCS-202ENST00000525435 CLUAP1Q96AJ1 413 aa15.56■□□□□ 0.08
CCS-202ENST00000525435 ATP6V0A2Q9Y487 856 aa15.56■□□□□ 0.08
CCS-202ENST00000525435 C21orf2O43822 256 aa15.55■□□□□ 0.08
CCS-202ENST00000525435 UBTFL1P0CB47 393 aaPredicted RBP15.55■□□□□ 0.08
CCS-202ENST00000525435 RABL6Q3YEC7 729 aaPredicted RBP15.55■□□□□ 0.08
CCS-202ENST00000525435 ARHGAP27Q6ZUM4 889 aa15.55■□□□□ 0.08
CCS-202ENST00000525435 TMEM57Q8N5G2 664 aa15.55■□□□□ 0.08
CCS-202ENST00000525435 WWC3Q9ULE0 1092 aa15.55■□□□□ 0.08
CCS-202ENST00000525435 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
CCS-202ENST00000525435 CCDC93Q567U6 631 aa15.54■□□□□ 0.08
CCS-202ENST00000525435 LMBR1LQ6UX01 489 aa15.54■□□□□ 0.08
CCS-202ENST00000525435 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
CCS-202ENST00000525435 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
CCS-202ENST00000525435 GREM2Q9H772 168 aa15.54■□□□□ 0.08
CCS-202ENST00000525435 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
CCS-202ENST00000525435 UTRNP46939 3433 aa15.53■□□□□ 0.08
CCS-202ENST00000525435 LTBP3Q9NS15 1303 aa15.53■□□□□ 0.08
CCS-202ENST00000525435 IFIT5Q13325 482 aaKnown RBP15.53■□□□□ 0.08
CCS-202ENST00000525435 EPHA10Q5JZY3 1008 aa15.53■□□□□ 0.08
CCS-202ENST00000525435 ANKRD18AQ8IVF6 992 aa15.53■□□□□ 0.08
CCS-202ENST00000525435 CELF1Q92879 486 aaKnown RBP15.53■□□□□ 0.08
CCS-202ENST00000525435 SUCLG2Q96I99 432 aa15.53■□□□□ 0.08
CCS-202ENST00000525435 SEC31BQ9NQW1 1179 aa15.53■□□□□ 0.08
CCS-202ENST00000525435 TNNQ9UQP3 1299 aa15.53■□□□□ 0.08
CCS-202ENST00000525435 GOLGB1Q14789 3259 aaKnown RBP15.53■□□□□ 0.08
CCS-202ENST00000525435 ANKRD18BA2A2Z9 1011 aa15.52■□□□□ 0.08
CCS-202ENST00000525435 ZBTB7BO15156 539 aaPredicted RBP15.52■□□□□ 0.08
CCS-202ENST00000525435 RLBP1P12271 317 aa15.52■□□□□ 0.08
CCS-202ENST00000525435 ITGA6P23229 1130 aa15.52■□□□□ 0.08
CCS-202ENST00000525435 CCDC57Q2TAC2 916 aa15.52■□□□□ 0.08
CCS-202ENST00000525435 MEIS3Q99687 375 aa15.52■□□□□ 0.08
CCS-202ENST00000525435 BICC1Q9H694 974 aaKnown RBP15.52■□□□□ 0.08
CCS-202ENST00000525435 BSDC1Q9NW68 430 aaPredicted RBP15.52■□□□□ 0.08
CCS-202ENST00000525435 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
CCS-202ENST00000525435 GNAI2P04899 355 aa15.51■□□□□ 0.07
CCS-202ENST00000525435 YY1P25490 414 aa15.51■□□□□ 0.07
CCS-202ENST00000525435 IGHMBP2P38935 993 aaKnown RBP15.51■□□□□ 0.07
CCS-202ENST00000525435 FAM161AQ3B820 660 aa15.51■□□□□ 0.07
CCS-202ENST00000525435 ITPRIPQ8IWB1 547 aa15.51■□□□□ 0.07
CCS-202ENST00000525435 PSMD1Q99460 953 aa15.51■□□□□ 0.07
CCS-202ENST00000525435 VPS33BQ9H267 617 aa15.51■□□□□ 0.07
CCS-202ENST00000525435 DLEC1Q9Y238 1755 aa15.51■□□□□ 0.07
CCS-202ENST00000525435 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
CCS-202ENST00000525435 PLIN1O60240 522 aa15.5■□□□□ 0.07
CCS-202ENST00000525435 ANKRD44Q8N8A2 993 aa15.5■□□□□ 0.07
CCS-202ENST00000525435 PANK1Q8TE04 598 aa15.5■□□□□ 0.07
CCS-202ENST00000525435 CCDC85AQ96PX6 553 aaPredicted RBP15.5■□□□□ 0.07
CCS-202ENST00000525435 TAOK3Q9H2K8 898 aa15.5■□□□□ 0.07
CCS-202ENST00000525435 ZNF219Q9P2Y4 722 aaPredicted RBP15.5■□□□□ 0.07
CCS-202ENST00000525435 DDX19BQ9UMR2 479 aa15.5■□□□□ 0.07
CCS-202ENST00000525435 COL11A2P13942 1736 aaPredicted RBP15.49■□□□□ 0.07
CCS-202ENST00000525435 DDX60Q8IY21 1712 aaKnown RBP15.49■□□□□ 0.07
CCS-202ENST00000525435 FKBP4Q02790 459 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCS-202ENST00000525435 MVPQ14764 893 aaKnown RBP15.49■□□□□ 0.07
CCS-202ENST00000525435 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
CCS-202ENST00000525435 MPHOSPH8Q99549 860 aa15.49■□□□□ 0.07
CCS-202ENST00000525435 RTFDC1Q9BY42 306 aaPredicted RBP15.49■□□□□ 0.07
CCS-202ENST00000525435 PODXL2Q9NZ53 605 aa15.49■□□□□ 0.07
CCS-202ENST00000525435 CHMP3Q9Y3E7 222 aa15.49■□□□□ 0.07
CCS-202ENST00000525435 LRRFIP2Q9Y608 721 aaKnown RBP15.49■□□□□ 0.07
CCS-202ENST00000525435 SLX4Q8IY92 1834 aa15.48■□□□□ 0.07
CCS-202ENST00000525435 NFKBIEO00221 500 aa15.48■□□□□ 0.07
CCS-202ENST00000525435 LMNB1P20700 586 aa15.48■□□□□ 0.07
CCS-202ENST00000525435 RRP1P56182 461 aaKnown RBP15.48■□□□□ 0.07
CCS-202ENST00000525435 MTX1Q13505 466 aa15.48■□□□□ 0.07
CCS-202ENST00000525435 MPNDQ8N594 471 aa15.48■□□□□ 0.07
CCS-202ENST00000525435 ARFGEF1Q9Y6D6 1849 aa15.47■□□□□ 0.07
CCS-202ENST00000525435 LAMB2P55268 1798 aa15.47■□□□□ 0.07
CCS-202ENST00000525435 TAF7LQ5H9L4 462 aa15.47■□□□□ 0.07
CCS-202ENST00000525435 DPP8Q6V1X1 898 aaPredicted RBP15.47■□□□□ 0.07
CCS-202ENST00000525435 ANKRD2Q9GZV1 360 aa15.47■□□□□ 0.07
CCS-202ENST00000525435 FBXO3Q9UK99 471 aa15.47■□□□□ 0.07
CCS-202ENST00000525435 MINPP1Q9UNW1 487 aa15.47■□□□□ 0.07
CCS-202ENST00000525435 SNED1Q8TER0 1413 aa15.46■□□□□ 0.07
CCS-202ENST00000525435 OLFM4Q6UX06 510 aa15.46■□□□□ 0.07
CCS-202ENST00000525435 LDHAL6AQ6ZMR3 332 aa15.46■□□□□ 0.07
CCS-202ENST00000525435 NSFL1CQ9UNZ2 370 aaKnown RBP15.46■□□□□ 0.07
CCS-202ENST00000525435 COG6Q9Y2V7 657 aa15.46■□□□□ 0.07
CCS-202ENST00000525435 ZC3H4Q9UPT8 1303 aaKnown RBP15.45■□□□□ 0.06
CCS-202ENST00000525435 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
CCS-202ENST00000525435 ANKIB1Q9P2G1 1089 aa15.45■□□□□ 0.06
CCS-202ENST00000525435 XDHP47989 1333 aa15.44■□□□□ 0.06
CCS-202ENST00000525435 ATP2B4P23634 1241 aa15.44■□□□□ 0.06
CCS-202ENST00000525435 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
CCS-202ENST00000525435 GPSM2P81274 684 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms