RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 BBOX1O75936 387 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 GMPSP49915 693 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 HSP90AB3PQ58FF7 597 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 XAGE3Q8WTP9 111 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 GPR101Q96P66 508 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 BABAM1Q9NWV8 329 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 TLL2Q9Y6L7 1015 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
TRAPPC4-206ENST00000525303 TMPOP42166 694 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 CIAPIN1Q6FI81 312 aa12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 MPNDQ8N594 471 aa12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 ZNF428Q96B54 188 aa12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 ABHD8Q96I13 439 aa12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 BEGAINQ9BUH8 593 aa12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 TRMT112Q9UI30 125 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 PSME4Q14997 1843 aa12.53□□□□□ -0.4
TRAPPC4-206ENST00000525303 COL4A1P02462 1669 aa12.52□□□□□ -0.4
TRAPPC4-206ENST00000525303 AOC2O75106 756 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 RAD17O75943 681 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 CELF2O95319 508 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 TCIRG1Q13488 830 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 GRAPQ13588 217 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 GRAPLQ8TC17 118 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 BCL2L13Q9BXK5 485 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 GLIS2Q9BZE0 524 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 SH3TC1Q8TE82 1336 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
TRAPPC4-206ENST00000525303 HIRAP54198 1017 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-206ENST00000525303 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
TRAPPC4-206ENST00000525303 SAPCD2Q86UD0 394 aa12.51□□□□□ -0.41
TRAPPC4-206ENST00000525303 TSKSQ9UJT2 592 aa12.51□□□□□ -0.41
TRAPPC4-206ENST00000525303 SPEF2Q9C093 1822 aa12.51□□□□□ -0.41
TRAPPC4-206ENST00000525303 MYH3P11055 1940 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 YDJCA8MPS7 323 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 TNIP1Q15025 636 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 TRPM4Q8TD43 1214 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 ZNF408Q9H9D4 720 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 CHPF2Q9P2E5 772 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 PGAP2Q9UHJ9 254 aa12.5□□□□□ -0.41
TRAPPC4-206ENST00000525303 SHTN1A0MZ66 631 aa12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 MAP2K2P36507 400 aa12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 RALBP1Q15311 655 aa12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 TMC4Q7Z404 712 aa12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 ZC3H15Q8WU90 426 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 CNOT7Q9UIV1 285 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-206ENST00000525303 H7C1D1 291 aa12.48□□□□□ -0.41
TRAPPC4-206ENST00000525303 CHL1O00533 1208 aa12.48□□□□□ -0.41
TRAPPC4-206ENST00000525303 CDC37L1Q7L3B6 337 aa12.48□□□□□ -0.41
TRAPPC4-206ENST00000525303 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
TRAPPC4-206ENST00000525303 HHIPL1Q96JK4 782 aa12.48□□□□□ -0.41
TRAPPC4-206ENST00000525303 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-206ENST00000525303 WASHC4Q2M389 1173 aa12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 FAM161AQ3B820 660 aa12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 MICALL2Q8IY33 904 aa12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 PLBD2Q8NHP8 589 aa12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 CELF1Q92879 486 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 DBNDD1Q9H9R9 158 aa12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
TRAPPC4-206ENST00000525303 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 ATP5J2-PTCD1G3V325 749 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 PSMD14O00487 310 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 BRPF1P55201 1214 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 DLK2Q6UY11 383 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 USP48Q86UV5 1035 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 DBF4Q9UBU7 674 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC4-206ENST00000525303 C6orf229H3BNL8 230 aa12.45□□□□□ -0.42
TRAPPC4-206ENST00000525303 CA12O43570 354 aa12.45□□□□□ -0.42
TRAPPC4-206ENST00000525303 GPSM2P81274 684 aa12.45□□□□□ -0.42
TRAPPC4-206ENST00000525303 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
TRAPPC4-206ENST00000525303 SAMD7Q7Z3H4 446 aa12.45□□□□□ -0.42
TRAPPC4-206ENST00000525303 RUNDC1Q96C34 613 aa12.45□□□□□ -0.42
TRAPPC4-206ENST00000525303 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
TRAPPC4-206ENST00000525303 MYBBP1AQ9BQG0 1328 aaKnown RBP12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 TNRC18O15417 2968 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 ECE2O60344 883 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 EGFRP00533 1210 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 HOXB7P09629 217 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 HUNKP57058 714 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 TBC1D10BQ4KMP7 808 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 DPF2Q92785 391 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 ZIC5Q96T25 663 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 KCNQ5Q9NR82 932 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 HYPKQ9NX55 129 aa12.44□□□□□ -0.42
TRAPPC4-206ENST00000525303 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms