RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
SMCO4-202ENST00000525141 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
SMCO4-202ENST00000525141 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
SMCO4-202ENST00000525141 CELF1Q92879 486 aaKnown RBP16.18■□□□□ 0.18
SMCO4-202ENST00000525141 MYD88Q99836 296 aa16.18■□□□□ 0.18
SMCO4-202ENST00000525141 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
SMCO4-202ENST00000525141 IL16Q14005 1332 aa16.18■□□□□ 0.18
SMCO4-202ENST00000525141 COL4A1P02462 1669 aa16.18■□□□□ 0.18
SMCO4-202ENST00000525141 IRS4O14654 1257 aaPredicted RBP16.17■□□□□ 0.18
SMCO4-202ENST00000525141 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
SMCO4-202ENST00000525141 GPC2Q8N158 579 aa16.17■□□□□ 0.18
SMCO4-202ENST00000525141 LARGE2Q8N3Y3 721 aa16.17■□□□□ 0.18
SMCO4-202ENST00000525141 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
SMCO4-202ENST00000525141 JDP2Q8WYK2 163 aa16.17■□□□□ 0.18
SMCO4-202ENST00000525141 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
SMCO4-202ENST00000525141 VAMP4O75379 141 aa16.16■□□□□ 0.18
SMCO4-202ENST00000525141 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
SMCO4-202ENST00000525141 IGKV5-2P06315 115 aa16.16■□□□□ 0.18
SMCO4-202ENST00000525141 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
SMCO4-202ENST00000525141 AOC3Q16853 763 aa16.16■□□□□ 0.18
SMCO4-202ENST00000525141 TWISTNBQ3B726 338 aaPredicted RBP16.16■□□□□ 0.18
SMCO4-202ENST00000525141 WDR63Q8IWG1 891 aa16.16■□□□□ 0.18
SMCO4-202ENST00000525141 MPNDQ8N594 471 aa16.16■□□□□ 0.18
SMCO4-202ENST00000525141 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
SMCO4-202ENST00000525141 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 KSR2Q6VAB6 950 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 CCDC191Q8NCU4 936 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 SEC31BQ9NQW1 1179 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 HACL1Q9UJ83 578 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
SMCO4-202ENST00000525141 SCN4AP35499 1836 aa16.15■□□□□ 0.18
SMCO4-202ENST00000525141 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
SMCO4-202ENST00000525141 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
SMCO4-202ENST00000525141 PCCAP05165 728 aaPredicted RBP16.14■□□□□ 0.17
SMCO4-202ENST00000525141 EPHX2P34913 555 aa16.14■□□□□ 0.17
SMCO4-202ENST00000525141 EPS15P42566 896 aa16.14■□□□□ 0.17
SMCO4-202ENST00000525141 CXCL9Q07325 125 aa16.14■□□□□ 0.17
SMCO4-202ENST00000525141 DPP8Q6V1X1 898 aaPredicted RBP16.14■□□□□ 0.17
SMCO4-202ENST00000525141 GJA3Q9Y6H8 435 aa16.14■□□□□ 0.17
SMCO4-202ENST00000525141 SCNN1DP51172 638 aa16.13■□□□□ 0.17
SMCO4-202ENST00000525141 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
SMCO4-202ENST00000525141 RPS8P62241 208 aaKnown RBP16.13■□□□□ 0.17
SMCO4-202ENST00000525141 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
SMCO4-202ENST00000525141 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
SMCO4-202ENST00000525141 PASKQ96RG2 1323 aa16.13■□□□□ 0.17
SMCO4-202ENST00000525141 GPSM2P81274 684 aa16.12■□□□□ 0.17
SMCO4-202ENST00000525141 EXOSC9Q06265 439 aaKnown RBP16.12■□□□□ 0.17
SMCO4-202ENST00000525141 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
SMCO4-202ENST00000525141 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
SMCO4-202ENST00000525141 CWC25Q9NXE8 425 aaPredicted RBP16.12■□□□□ 0.17
SMCO4-202ENST00000525141 POLLQ9UGP5 575 aa16.12■□□□□ 0.17
SMCO4-202ENST00000525141 ZNRF3Q9ULT6 936 aa16.12■□□□□ 0.17
SMCO4-202ENST00000525141 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
SMCO4-202ENST00000525141 LTBP1Q14766 1721 aa16.11■□□□□ 0.17
SMCO4-202ENST00000525141 YDJCA8MPS7 323 aa16.11■□□□□ 0.17
SMCO4-202ENST00000525141 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
SMCO4-202ENST00000525141 TMC4Q7Z404 712 aa16.11■□□□□ 0.17
SMCO4-202ENST00000525141 NIM1KQ8IY84 436 aa16.11■□□□□ 0.17
SMCO4-202ENST00000525141 SUPT20HQ8NEM7 779 aa16.11■□□□□ 0.17
SMCO4-202ENST00000525141 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
SMCO4-202ENST00000525141 H7C1W4 665 aa16.1■□□□□ 0.17
SMCO4-202ENST00000525141 PDE8AO60658 829 aa16.1■□□□□ 0.17
SMCO4-202ENST00000525141 DDX58O95786 925 aaKnown RBP16.1■□□□□ 0.17
SMCO4-202ENST00000525141 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
SMCO4-202ENST00000525141 NSFL1CQ9UNZ2 370 aaKnown RBP16.1■□□□□ 0.17
SMCO4-202ENST00000525141 ADAMTSL1Q8N6G6 1762 aa16.09■□□□□ 0.17
SMCO4-202ENST00000525141 NEURL1BA8MQ27 555 aa16.09■□□□□ 0.17
SMCO4-202ENST00000525141 MAP1SQ66K74 1059 aaPredicted RBP16.09■□□□□ 0.17
SMCO4-202ENST00000525141 PNMA8AQ86V59 439 aaPredicted RBP16.09■□□□□ 0.17
SMCO4-202ENST00000525141 CNTROBQ8N137 903 aa16.09■□□□□ 0.17
SMCO4-202ENST00000525141 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
SMCO4-202ENST00000525141 STK31Q9BXU1 1019 aa16.09■□□□□ 0.17
SMCO4-202ENST00000525141 KCNQ5Q9NR82 932 aa16.09■□□□□ 0.17
SMCO4-202ENST00000525141 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
SMCO4-202ENST00000525141 DUOX1Q9NRD9 1551 aa16.09■□□□□ 0.17
SMCO4-202ENST00000525141 WTIPA6NIX2 430 aaPredicted RBP16.08■□□□□ 0.16
SMCO4-202ENST00000525141 RAD17O75943 681 aa16.08■□□□□ 0.16
SMCO4-202ENST00000525141 FMR1Q06787 632 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMCO4-202ENST00000525141 FLIIQ13045 1269 aa16.08■□□□□ 0.16
SMCO4-202ENST00000525141 TTLL11Q8NHH1 800 aa16.08■□□□□ 0.16
SMCO4-202ENST00000525141 TBC1D16Q8TBP0 767 aa16.08■□□□□ 0.16
SMCO4-202ENST00000525141 GPR101Q96P66 508 aaPredicted RBP16.08■□□□□ 0.16
SMCO4-202ENST00000525141 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.16
SMCO4-202ENST00000525141 RIMBP2O15034 1052 aa16.07■□□□□ 0.16
SMCO4-202ENST00000525141 HIRAP54198 1017 aaPredicted RBP16.07■□□□□ 0.16
SMCO4-202ENST00000525141 CASP7P55210 303 aa16.07■□□□□ 0.16
SMCO4-202ENST00000525141 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
SMCO4-202ENST00000525141 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
SMCO4-202ENST00000525141 GPRC5DQ9NZD1 345 aa16.07■□□□□ 0.16
SMCO4-202ENST00000525141 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
SMCO4-202ENST00000525141 LRRC37AA6NMS7 1700 aa16.06■□□□□ 0.16
SMCO4-202ENST00000525141 SHTN1A0MZ66 631 aa16.06■□□□□ 0.16
SMCO4-202ENST00000525141 GMPSP49915 693 aaPredicted RBP16.06■□□□□ 0.16
SMCO4-202ENST00000525141 CIAPIN1Q6FI81 312 aa16.06■□□□□ 0.16
SMCO4-202ENST00000525141 PODXL2Q9NZ53 605 aa16.06■□□□□ 0.16
SMCO4-202ENST00000525141 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms