RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CCDC85AQ96PX6 553 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC4-205ENST00000525079 POTECB2RU33 542 aa16.43■□□□□ 0.22
TRAPPC4-205ENST00000525079 VEGFAP15692 232 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC4-205ENST00000525079 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
TRAPPC4-205ENST00000525079 SP8Q8IXZ3 490 aa16.43■□□□□ 0.22
TRAPPC4-205ENST00000525079 COL4A1P02462 1669 aa16.43■□□□□ 0.22
TRAPPC4-205ENST00000525079 ZNF541Q9H0D2 1346 aa16.43■□□□□ 0.22
TRAPPC4-205ENST00000525079 NEURL1BA8MQ27 555 aa16.42■□□□□ 0.22
TRAPPC4-205ENST00000525079 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
TRAPPC4-205ENST00000525079 MIER1Q8N108 512 aa16.42■□□□□ 0.22
TRAPPC4-205ENST00000525079 DNAAF4Q8WXU2 420 aa16.42■□□□□ 0.22
TRAPPC4-205ENST00000525079 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
TRAPPC4-205ENST00000525079 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
TRAPPC4-205ENST00000525079 COL4A5P29400 1685 aa16.41■□□□□ 0.22
TRAPPC4-205ENST00000525079 F6X3S4 739 aa16.41■□□□□ 0.22
TRAPPC4-205ENST00000525079 PDE8AO60658 829 aa16.41■□□□□ 0.22
TRAPPC4-205ENST00000525079 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC4-205ENST00000525079 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
TRAPPC4-205ENST00000525079 MPNDQ8N594 471 aa16.41■□□□□ 0.22
TRAPPC4-205ENST00000525079 JDP2Q8WYK2 163 aa16.41■□□□□ 0.22
TRAPPC4-205ENST00000525079 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
TRAPPC4-205ENST00000525079 E9PSI1 815 aa16.4■□□□□ 0.22
TRAPPC4-205ENST00000525079 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
TRAPPC4-205ENST00000525079 SLFN5Q08AF3 891 aa16.4■□□□□ 0.22
TRAPPC4-205ENST00000525079 AOC3Q16853 763 aa16.4■□□□□ 0.22
TRAPPC4-205ENST00000525079 RBM46Q8TBY0 533 aaKnown RBP16.4■□□□□ 0.22
TRAPPC4-205ENST00000525079 CACNA1FO60840 1977 aa16.4■□□□□ 0.22
TRAPPC4-205ENST00000525079 FZD9O00144 591 aa16.39■□□□□ 0.21
TRAPPC4-205ENST00000525079 HSP90B1P14625 803 aaKnown RBP16.39■□□□□ 0.21
TRAPPC4-205ENST00000525079 HSPA6P17066 643 aa16.39■□□□□ 0.21
TRAPPC4-205ENST00000525079 RPS8P62241 208 aaKnown RBP16.39■□□□□ 0.21
TRAPPC4-205ENST00000525079 UBE3BQ7Z3V4 1068 aa16.39■□□□□ 0.21
TRAPPC4-205ENST00000525079 CDHR2Q9BYE9 1310 aa16.39■□□□□ 0.21
TRAPPC4-205ENST00000525079 H7C1W4 665 aa16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 GCKRQ14397 625 aa16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 CCDC152Q4G0S7 254 aa16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 TMC4Q7Z404 712 aa16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 NSFL1CQ9UNZ2 370 aaKnown RBP16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 GJA3Q9Y6H8 435 aa16.38■□□□□ 0.21
TRAPPC4-205ENST00000525079 CTSWP56202 376 aa16.37■□□□□ 0.21
TRAPPC4-205ENST00000525079 EIF6P56537 245 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-205ENST00000525079 GPSM2P81274 684 aa16.37■□□□□ 0.21
TRAPPC4-205ENST00000525079 NIM1KQ8IY84 436 aa16.37■□□□□ 0.21
TRAPPC4-205ENST00000525079 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
TRAPPC4-205ENST00000525079 C6orf229H3BNL8 230 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 RIMBP2O15034 1052 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 POTEIP0CG38 1075 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 POTEJP0CG39 1038 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 FSTL1Q12841 308 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 BEND3Q5T5X7 828 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 SLC4A10Q6U841 1118 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 MRPL50Q8N5N7 158 aaKnown RBP16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 SMC1BQ8NDV3 1235 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 TTLL11Q8NHH1 800 aa16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 L3MBTL3Q96JM7 780 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-205ENST00000525079 DUOX1Q9NRD9 1551 aa16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 CASP7P55210 303 aa16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 GPC2Q8N158 579 aa16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 GPR101Q96P66 508 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 BCL2L13Q9BXK5 485 aa16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 GREM2Q9H772 168 aa16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 POLLQ9UGP5 575 aa16.34■□□□□ 0.21
TRAPPC4-205ENST00000525079 IQCA1LA6NCM1 817 aa16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 KIAA2012Q0VF49 1180 aa16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 ANKRD18AQ8IVF6 992 aa16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 TRMT2AQ8IZ69 625 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 TAF1DQ9H5J8 278 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 HACL1Q9UJ83 578 aa16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 ZNRF3Q9ULT6 936 aa16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 MYH3P11055 1940 aa16.33■□□□□ 0.2
TRAPPC4-205ENST00000525079 HTRA3P83110 453 aa16.32■□□□□ 0.2
TRAPPC4-205ENST00000525079 CXCL9Q07325 125 aa16.32■□□□□ 0.2
TRAPPC4-205ENST00000525079 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
TRAPPC4-205ENST00000525079 EAPPQ56P03 285 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC4-205ENST00000525079 SPEF2Q9C093 1822 aa16.32■□□□□ 0.2
TRAPPC4-205ENST00000525079 ANKIB1Q9P2G1 1089 aa16.32■□□□□ 0.2
TRAPPC4-205ENST00000525079 SCN4AP35499 1836 aa16.31■□□□□ 0.2
TRAPPC4-205ENST00000525079 RAD17O75943 681 aa16.31■□□□□ 0.2
TRAPPC4-205ENST00000525079 EPHX2P34913 555 aa16.31■□□□□ 0.2
TRAPPC4-205ENST00000525079 TBC1D16Q8TBP0 767 aa16.31■□□□□ 0.2
TRAPPC4-205ENST00000525079 CDC5LQ99459 802 aaKnown RBP16.31■□□□□ 0.2
TRAPPC4-205ENST00000525079 YDJCA8MPS7 323 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 UFL1O94874 794 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 APLP1P51693 650 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 PLA2G12BQ9BX93 195 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 SRCIN1Q9C0H9 1055 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 DBNDD1Q9H9R9 158 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
TRAPPC4-205ENST00000525079 LTBP1Q14766 1721 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 WTIPA6NIX2 430 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 GRM8O00222 908 aa16.29■□□□□ 0.2
TRAPPC4-205ENST00000525079 CSF1RP07333 972 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms