RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 KIF1BPQ96EK5 621 aa13.09□□□□□ -0.31
PACS1-202ENST00000524784 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
PACS1-202ENST00000524784 BCL11AQ9H165 835 aa13.09□□□□□ -0.31
PACS1-202ENST00000524784 ANO8Q9HCE9 1232 aaPredicted RBP13.09□□□□□ -0.31
PACS1-202ENST00000524784 SERPINB2P05120 415 aa13.08□□□□□ -0.32
PACS1-202ENST00000524784 CCDC152Q4G0S7 254 aa13.08□□□□□ -0.32
PACS1-202ENST00000524784 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
PACS1-202ENST00000524784 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
PACS1-202ENST00000524784 NLRP3Q96P20 1036 aa13.08□□□□□ -0.32
PACS1-202ENST00000524784 PA2G4Q9UQ80 394 aaKnown RBP13.08□□□□□ -0.32
PACS1-202ENST00000524784 C4AP0C0L4 1744 aa13.08□□□□□ -0.32
PACS1-202ENST00000524784 ITGA6P23229 1130 aa13.07□□□□□ -0.32
PACS1-202ENST00000524784 ST5P78524 1137 aa13.07□□□□□ -0.32
PACS1-202ENST00000524784 PTPN12Q05209 780 aaKnown RBP13.07□□□□□ -0.32
PACS1-202ENST00000524784 FAM161AQ3B820 660 aa13.07□□□□□ -0.32
PACS1-202ENST00000524784 KLHDC4Q8TBB5 520 aa13.07□□□□□ -0.32
PACS1-202ENST00000524784 RHPN1Q8TCX5 695 aa13.07□□□□□ -0.32
PACS1-202ENST00000524784 SIL1Q9H173 461 aa13.07□□□□□ -0.32
PACS1-202ENST00000524784 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
PACS1-202ENST00000524784 SF3B3Q15393 1217 aaKnown RBP13.06□□□□□ -0.32
PACS1-202ENST00000524784 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
PACS1-202ENST00000524784 CLASRPQ8N2M8 674 aaKnown RBP13.06□□□□□ -0.32
PACS1-202ENST00000524784 GREM2Q9H772 168 aa13.06□□□□□ -0.32
PACS1-202ENST00000524784 FBXO3Q9UK99 471 aa13.06□□□□□ -0.32
PACS1-202ENST00000524784 PARP3Q9Y6F1 533 aa13.06□□□□□ -0.32
PACS1-202ENST00000524784 EYA2O00167 538 aa13.05□□□□□ -0.32
PACS1-202ENST00000524784 POLRMTO00411 1230 aaKnown RBP13.05□□□□□ -0.32
PACS1-202ENST00000524784 CIAO1O76071 339 aa13.05□□□□□ -0.32
PACS1-202ENST00000524784 IL15P40933 162 aaPredicted RBP13.05□□□□□ -0.32
PACS1-202ENST00000524784 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
PACS1-202ENST00000524784 MMP10P09238 476 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 PDE4AP27815 886 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 IGHMBP2P38935 993 aaKnown RBP13.04□□□□□ -0.32
PACS1-202ENST00000524784 DDR1Q08345 913 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 PRR5LQ6MZQ0 368 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 LDHAL6AQ6ZMR3 332 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 CCDC24Q8N4L8 307 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 SLC16A10Q8TF71 515 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
PACS1-202ENST00000524784 MPHOSPH8Q99549 860 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 IL1RAPL2Q9NP60 686 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 CNNM1Q9NRU3 951 aa13.04□□□□□ -0.32
PACS1-202ENST00000524784 SASH1O94885 1247 aa13.03□□□□□ -0.32
PACS1-202ENST00000524784 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
PACS1-202ENST00000524784 C16orf71Q8IYS4 520 aaPredicted RBP13.03□□□□□ -0.32
PACS1-202ENST00000524784 CEP126Q9P2H0 1117 aa13.03□□□□□ -0.32
PACS1-202ENST00000524784 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
PACS1-202ENST00000524784 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
PACS1-202ENST00000524784 DDX46Q7L014 1031 aaKnown RBP13.02□□□□□ -0.33
PACS1-202ENST00000524784 ANKRD18AQ8IVF6 992 aa13.02□□□□□ -0.33
PACS1-202ENST00000524784 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.33
PACS1-202ENST00000524784 TFCP2Q12800 502 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 LRRC24Q50LG9 513 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 ATG9AQ7Z3C6 839 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 AACSQ86V21 672 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 PLEKHM2Q8IWE5 1019 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
PACS1-202ENST00000524784 BRIP1Q9BX63 1249 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 PUS3Q9BZE2 481 aaKnown RBP13.01□□□□□ -0.33
PACS1-202ENST00000524784 SEC31BQ9NQW1 1179 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 AKAP2Q9Y2D5 859 aa13.01□□□□□ -0.33
PACS1-202ENST00000524784 MROH5Q6ZUA9 1318 aa13□□□□□ -0.33
PACS1-202ENST00000524784 MX1P20591 662 aa13□□□□□ -0.33
PACS1-202ENST00000524784 METTL24Q5JXM2 366 aa13□□□□□ -0.33
PACS1-202ENST00000524784 GPATCH3Q96I76 525 aa13□□□□□ -0.33
PACS1-202ENST00000524784 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
PACS1-202ENST00000524784 TUBGCP6Q96RT7 1819 aa12.99□□□□□ -0.33
PACS1-202ENST00000524784 RIC1Q4ADV7 1423 aa12.99□□□□□ -0.33
PACS1-202ENST00000524784 PDE6BP35913 854 aa12.99□□□□□ -0.33
PACS1-202ENST00000524784 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
PACS1-202ENST00000524784 TNNI3KQ59H18 835 aa12.99□□□□□ -0.33
PACS1-202ENST00000524784 OTUD7AQ8TE49 926 aaPredicted RBP12.99□□□□□ -0.33
PACS1-202ENST00000524784 RBM17Q96I25 401 aaKnown RBP12.99□□□□□ -0.33
PACS1-202ENST00000524784 GPR108Q9NPR9 543 aa12.99□□□□□ -0.33
PACS1-202ENST00000524784 FPGT-TNNI3KV9GXZ4 949 aa12.99□□□□□ -0.33
PACS1-202ENST00000524784 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
PACS1-202ENST00000524784 MYH3P11055 1940 aa12.98□□□□□ -0.33
PACS1-202ENST00000524784 PDE1AP54750 535 aa12.98□□□□□ -0.33
PACS1-202ENST00000524784 EAF2Q96CJ1 260 aaPredicted RBP12.98□□□□□ -0.33
PACS1-202ENST00000524784 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
PACS1-202ENST00000524784 CCDC8Q9H0W5 538 aaPredicted RBP12.98□□□□□ -0.33
PACS1-202ENST00000524784 OSBPL3Q9H4L5 887 aa12.98□□□□□ -0.33
PACS1-202ENST00000524784 BSDC1Q9NW68 430 aaPredicted RBP12.98□□□□□ -0.33
PACS1-202ENST00000524784 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
PACS1-202ENST00000524784 DDX60Q8IY21 1712 aaKnown RBP12.98□□□□□ -0.33
PACS1-202ENST00000524784 LAMB2P55268 1798 aa12.97□□□□□ -0.33
PACS1-202ENST00000524784 AOX1Q06278 1338 aa12.97□□□□□ -0.33
PACS1-202ENST00000524784 TTC41PQ6P2S7 1318 aa12.97□□□□□ -0.33
PACS1-202ENST00000524784 ERC2O15083 957 aa12.97□□□□□ -0.33
PACS1-202ENST00000524784 GRAPQ13588 217 aa12.97□□□□□ -0.33
PACS1-202ENST00000524784 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
PACS1-202ENST00000524784 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
PACS1-202ENST00000524784 GRAPLQ8TC17 118 aaPredicted RBP12.97□□□□□ -0.33
PACS1-202ENST00000524784 CELF1Q92879 486 aaKnown RBP12.97□□□□□ -0.33
PACS1-202ENST00000524784 PDGFDQ9GZP0 370 aaPredicted RBP12.97□□□□□ -0.33
PACS1-202ENST00000524784 ECHDC1Q9NTX5 307 aa12.97□□□□□ -0.33
PACS1-202ENST00000524784 KLRG2A4D1S0 409 aaPredicted RBP12.96□□□□□ -0.33
PACS1-202ENST00000524784 PDE8BO95263 885 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms