RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 TRMT112Q9UI30 125 aaKnown RBP16.72■□□□□ 0.27
SF3B2-203ENST00000524627 AOC2O75106 756 aa16.71■□□□□ 0.27
SF3B2-203ENST00000524627 RAD17O75943 681 aa16.71■□□□□ 0.27
SF3B2-203ENST00000524627 CELF2O95319 508 aaKnown RBP16.71■□□□□ 0.27
SF3B2-203ENST00000524627 KIAA2012Q0VF49 1180 aa16.71■□□□□ 0.27
SF3B2-203ENST00000524627 CIAPIN1Q6FI81 312 aa16.71■□□□□ 0.27
SF3B2-203ENST00000524627 DDX46Q7L014 1031 aaKnown RBP16.71■□□□□ 0.27
SF3B2-203ENST00000524627 ZNF428Q96B54 188 aa16.71■□□□□ 0.27
SF3B2-203ENST00000524627 BCL2L13Q9BXK5 485 aa16.71■□□□□ 0.27
SF3B2-203ENST00000524627 GLIS2Q9BZE0 524 aaPredicted RBP16.71■□□□□ 0.27
SF3B2-203ENST00000524627 BABAM1Q9NWV8 329 aa16.71■□□□□ 0.27
SF3B2-203ENST00000524627 TMPOP42166 694 aaKnown RBP16.7■□□□□ 0.26
SF3B2-203ENST00000524627 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
SF3B2-203ENST00000524627 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
SF3B2-203ENST00000524627 GRAPQ13588 217 aa16.7■□□□□ 0.26
SF3B2-203ENST00000524627 GRAPLQ8TC17 118 aaPredicted RBP16.7■□□□□ 0.26
SF3B2-203ENST00000524627 TSKSQ9UJT2 592 aa16.7■□□□□ 0.26
SF3B2-203ENST00000524627 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
SF3B2-203ENST00000524627 KRT24Q2M2I5 525 aa16.69■□□□□ 0.26
SF3B2-203ENST00000524627 SAPCD2Q86UD0 394 aa16.69■□□□□ 0.26
SF3B2-203ENST00000524627 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
SF3B2-203ENST00000524627 TAF1P21675 1872 aa16.69■□□□□ 0.26
SF3B2-203ENST00000524627 TNIP1Q15025 636 aa16.68■□□□□ 0.26
SF3B2-203ENST00000524627 NEUROD2Q15784 382 aa16.68■□□□□ 0.26
SF3B2-203ENST00000524627 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
SF3B2-203ENST00000524627 CDHR2Q9BYE9 1310 aa16.68■□□□□ 0.26
SF3B2-203ENST00000524627 SHTN1A0MZ66 631 aa16.67■□□□□ 0.26
SF3B2-203ENST00000524627 YDJCA8MPS7 323 aa16.67■□□□□ 0.26
SF3B2-203ENST00000524627 MAP2K2P36507 400 aa16.67■□□□□ 0.26
SF3B2-203ENST00000524627 HIRAP54198 1017 aaPredicted RBP16.67■□□□□ 0.26
SF3B2-203ENST00000524627 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
SF3B2-203ENST00000524627 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
SF3B2-203ENST00000524627 CCDC146Q8IYE0 955 aa16.66■□□□□ 0.26
SF3B2-203ENST00000524627 ZC3H15Q8WU90 426 aaKnown RBP16.66■□□□□ 0.26
SF3B2-203ENST00000524627 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
SF3B2-203ENST00000524627 CHPF2Q9P2E5 772 aa16.66■□□□□ 0.26
SF3B2-203ENST00000524627 CNOT7Q9UIV1 285 aaKnown RBP16.66■□□□□ 0.26
SF3B2-203ENST00000524627 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
SF3B2-203ENST00000524627 CCDC85CA6NKD9 419 aa16.65■□□□□ 0.26
SF3B2-203ENST00000524627 H7C1D1 291 aa16.65■□□□□ 0.26
SF3B2-203ENST00000524627 CDC37L1Q7L3B6 337 aa16.65■□□□□ 0.26
SF3B2-203ENST00000524627 TMC4Q7Z404 712 aa16.65■□□□□ 0.26
SF3B2-203ENST00000524627 MICALL2Q8IY33 904 aa16.65■□□□□ 0.26
SF3B2-203ENST00000524627 CHL1O00533 1208 aa16.64■□□□□ 0.25
SF3B2-203ENST00000524627 RALBP1Q15311 655 aa16.64■□□□□ 0.25
SF3B2-203ENST00000524627 HHIPL1Q96JK4 782 aa16.64■□□□□ 0.25
SF3B2-203ENST00000524627 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
SF3B2-203ENST00000524627 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
SF3B2-203ENST00000524627 LRRC37AA6NMS7 1700 aa16.64■□□□□ 0.25
SF3B2-203ENST00000524627 DDX60Q8IY21 1712 aaKnown RBP16.64■□□□□ 0.25
SF3B2-203ENST00000524627 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
SF3B2-203ENST00000524627 PSMD14O00487 310 aa16.63■□□□□ 0.25
SF3B2-203ENST00000524627 WASHC4Q2M389 1173 aa16.63■□□□□ 0.25
SF3B2-203ENST00000524627 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
SF3B2-203ENST00000524627 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
SF3B2-203ENST00000524627 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
SF3B2-203ENST00000524627 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
SF3B2-203ENST00000524627 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
SF3B2-203ENST00000524627 NSFL1CQ9UNZ2 370 aaKnown RBP16.63■□□□□ 0.25
SF3B2-203ENST00000524627 RIMBP2O15034 1052 aa16.62■□□□□ 0.25
SF3B2-203ENST00000524627 CA12O43570 354 aa16.62■□□□□ 0.25
SF3B2-203ENST00000524627 BRPF1P55201 1214 aaPredicted RBP16.62■□□□□ 0.25
SF3B2-203ENST00000524627 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
SF3B2-203ENST00000524627 DLK2Q6UY11 383 aa16.62■□□□□ 0.25
SF3B2-203ENST00000524627 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
SF3B2-203ENST00000524627 SAMD7Q7Z3H4 446 aa16.62■□□□□ 0.25
SF3B2-203ENST00000524627 C6orf229H3BNL8 230 aa16.61■□□□□ 0.25
SF3B2-203ENST00000524627 DPF2Q92785 391 aa16.61■□□□□ 0.25
SF3B2-203ENST00000524627 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
SF3B2-203ENST00000524627 TRIM35Q9UPQ4 493 aa16.61■□□□□ 0.25
SF3B2-203ENST00000524627 CASP8AP2Q9UKL3 1982 aa16.6■□□□□ 0.25
SF3B2-203ENST00000524627 COL4A1P02462 1669 aa16.6■□□□□ 0.25
SF3B2-203ENST00000524627 HUNKP57058 714 aa16.6■□□□□ 0.25
SF3B2-203ENST00000524627 GPSM2P81274 684 aa16.6■□□□□ 0.25
SF3B2-203ENST00000524627 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
SF3B2-203ENST00000524627 TBC1D10BQ4KMP7 808 aaPredicted RBP16.6■□□□□ 0.25
SF3B2-203ENST00000524627 ZIC5Q96T25 663 aa16.6■□□□□ 0.25
SF3B2-203ENST00000524627 DBF4Q9UBU7 674 aaPredicted RBP16.6■□□□□ 0.25
SF3B2-203ENST00000524627 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
SF3B2-203ENST00000524627 ECE2O60344 883 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 EGFRP00533 1210 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 NOGQ13253 232 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
SF3B2-203ENST00000524627 KRT26Q7Z3Y9 468 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 MCOLN1Q9GZU1 580 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
SF3B2-203ENST00000524627 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
SF3B2-203ENST00000524627 HOXB7P09629 217 aa16.58■□□□□ 0.24
SF3B2-203ENST00000524627 MLLT1Q03111 559 aaPredicted RBP16.58■□□□□ 0.24
SF3B2-203ENST00000524627 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.24
SF3B2-203ENST00000524627 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
SF3B2-203ENST00000524627 EYA3Q99504 573 aa16.58■□□□□ 0.24
SF3B2-203ENST00000524627 MYBBP1AQ9BQG0 1328 aaKnown RBP16.58■□□□□ 0.24
SF3B2-203ENST00000524627 RTL9Q8NET4 1388 aa16.58■□□□□ 0.24
SF3B2-203ENST00000524627 ADM5C9JUS6 153 aa16.57■□□□□ 0.24
SF3B2-203ENST00000524627 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
SF3B2-203ENST00000524627 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
SF3B2-203ENST00000524627 DCPSQ96C86 337 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms