RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 RAPGEF4Q8WZA2 1011 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 ZNF335Q9H4Z2 1342 aaPredicted RBP9.88□□□□□ -0.83
CHD7-202ENST00000524602 ARFGEF2Q9Y6D5 1785 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 DYNC1I1O14576 645 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 MTERF4Q7Z6M4 381 aaKnown RBP9.88□□□□□ -0.83
CHD7-202ENST00000524602 LARP6Q9BRS8 491 aaKnown RBP9.88□□□□□ -0.83
CHD7-202ENST00000524602 SCAND2PQ9GZW5 306 aaPredicted RBP9.88□□□□□ -0.83
CHD7-202ENST00000524602 CCDC8Q9H0W5 538 aaPredicted RBP9.88□□□□□ -0.83
CHD7-202ENST00000524602 PKD1L3Q7Z443 1732 aa9.88□□□□□ -0.83
CHD7-202ENST00000524602 PARP4Q9UKK3 1724 aaKnown RBP9.87□□□□□ -0.83
CHD7-202ENST00000524602 A0A0D9SFI3 127 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 VPS37CA5D8V6 355 aaPredicted RBP9.87□□□□□ -0.83
CHD7-202ENST00000524602 ADCY5O95622 1261 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 CCDC192P0DO97 292 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 HCLS1P14317 486 aaPredicted RBP9.87□□□□□ -0.83
CHD7-202ENST00000524602 PDE4CQ08493 712 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 AIMP1Q12904 312 aaKnown RBP9.87□□□□□ -0.83
CHD7-202ENST00000524602 BRINP3Q76B58 766 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 PIBF1Q8WXW3 757 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 SPATA31A3Q5VYP0 1347 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 USP25Q9UHP3 1055 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 CHRNA2Q15822 529 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 RABL6Q3YEC7 729 aaPredicted RBP9.87□□□□□ -0.83
CHD7-202ENST00000524602 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 NLRP2Q9NX02 1062 aa9.87□□□□□ -0.83
CHD7-202ENST00000524602 TLR7Q9NYK1 1049 aaKnown RBP9.87□□□□□ -0.83
CHD7-202ENST00000524602 ZHX1Q9UKY1 873 aaPredicted RBP9.87□□□□□ -0.83
CHD7-202ENST00000524602 PHKG2P15735 406 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 TATP17735 454 aaPredicted RBP9.86□□□□□ -0.83
CHD7-202ENST00000524602 TAF5LO75529 589 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 SNRPA1P09661 255 aaKnown RBP9.86□□□□□ -0.83
CHD7-202ENST00000524602 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 XAGE3Q8WTP9 111 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 PRDM10Q9NQV6 1147 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 U3KPZ7 1027 aaPredicted RBP9.86□□□□□ -0.83
CHD7-202ENST00000524602 UQCRHLA0A096LP55 91 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 UQCRHP07919 91 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 TOB2Q14106 344 aaPredicted RBP9.86□□□□□ -0.83
CHD7-202ENST00000524602 IFNL2Q8IZJ0 200 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 PRIMPOLQ96LW4 560 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 FAM13BQ9NYF5 915 aa9.86□□□□□ -0.83
CHD7-202ENST00000524602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.86□□□□□ -0.83
CHD7-202ENST00000524602 RFX5P48382 616 aaPredicted RBP9.85□□□□□ -0.83
CHD7-202ENST00000524602 FGD1P98174 961 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 TNNI3KQ59H18 835 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 COPS6Q7L5N1 327 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 LRP10Q7Z4F1 713 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 NECAB1Q8N987 351 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 MYD88Q99836 296 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 SIL1Q9H173 461 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 FPGT-TNNI3KV9GXZ4 949 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 GOLGA6L6A8MZA4 724 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 HMGN5P82970 282 aaKnown RBP9.85□□□□□ -0.83
CHD7-202ENST00000524602 MAP3K11Q16584 847 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 GIMAP6Q6P9H5 292 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 DCAF5Q96JK2 942 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 SPTLC3Q9NUV7 552 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 MEGF6O75095 1541 aa9.85□□□□□ -0.83
CHD7-202ENST00000524602 CDC37L1Q7L3B6 337 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 HOMEZQ8IX15 550 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 TTC5Q8N0Z6 440 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 NUP62CLQ9H1M0 184 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 DDX19AQ9NUU7 478 aaKnown RBP9.84□□□□□ -0.83
CHD7-202ENST00000524602 SPEF2Q9C093 1822 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 HMGB1P09429 215 aaKnown RBP9.84□□□□□ -0.83
CHD7-202ENST00000524602 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 PTPN12Q05209 780 aaKnown RBP9.84□□□□□ -0.83
CHD7-202ENST00000524602 TTC6Q86TZ1 520 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 FAM200AQ8TCP9 573 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 FMNL2Q96PY5 1086 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 HAUS7Q99871 368 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 MYL6BP14649 208 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 EPHA10Q5JZY3 1008 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 RBM43Q6ZSC3 357 aaKnown RBP9.84□□□□□ -0.83
CHD7-202ENST00000524602 ZNF589Q86UQ0 364 aaPredicted RBP9.84□□□□□ -0.83
CHD7-202ENST00000524602 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 GTF3C6Q969F1 213 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 SLAIN2Q9P270 581 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 DBNLQ9UJU6 430 aaKnown RBP9.84□□□□□ -0.83
CHD7-202ENST00000524602 SH3TC1Q8TE82 1336 aa9.84□□□□□ -0.83
CHD7-202ENST00000524602 SLC39A6Q13433 755 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 NOLC1Q14978 699 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHD7-202ENST00000524602 NEK1Q96PY6 1258 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 LLPHQ9BRT6 129 aaKnown RBP9.83□□□□□ -0.84
CHD7-202ENST00000524602 ZSCAN16Q9H4T2 348 aaPredicted RBP9.83□□□□□ -0.84
CHD7-202ENST00000524602 PALLDQ8WX93 1383 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 GLI3P10071 1580 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 MYH15Q9Y2K3 1946 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 CAVIN2O95810 425 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 MCMDC2Q4G0Z9 681 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 CHMP4CQ96CF2 233 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 ZNF496Q96IT1 587 aaPredicted RBP9.83□□□□□ -0.84
CHD7-202ENST00000524602 SPATA32Q96LK8 384 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
CHD7-202ENST00000524602 CPDO75976 1380 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 GOLGA6L4A6NEF3 574 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 MYRIPQ8NFW9 859 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 PLBD2Q8NHP8 589 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 GPR108Q9NPR9 543 aa9.83□□□□□ -0.84
CHD7-202ENST00000524602 ZNF609O15014 1411 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms