RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, human

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-213	ENST00000524516	SUPT20H	Q8NEM7	779 aa		11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	CFHR5	Q9BXR6	569 aa		11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	VPS33B	Q9H267	617 aa		11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	GGA3	Q9NZ52	723 aa		11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	RAPGEFL1	Q9UHV5	662 aa		11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	NR2E3	Q9Y5X4	410 aa		11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	UBR2	Q8IWV8	1755 aa		11.18	□□□□□ -0.62
PUM1-213	ENST00000524516	PRAMEF22	A3QJZ6	481 aa		11.17	□□□□□ -0.62
PUM1-213	ENST00000524516	ALDH1A1	P00352	501 aa		11.17	□□□□□ -0.62
PUM1-213	ENST00000524516	SLC51A	Q86UW1	340 aa		11.17	□□□□□ -0.62
PUM1-213	ENST00000524516	CD99L2	Q8TCZ2	262 aa		11.17	□□□□□ -0.62
PUM1-213	ENST00000524516	EFCC1	Q9HA90	598 aa		11.17	□□□□□ -0.62
PUM1-213	ENST00000524516	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.17	□□□□□ -0.62
PUM1-213	ENST00000524516	ZNF609	O15014	1411 aa		11.17	□□□□□ -0.62
PUM1-213	ENST00000524516	POLR2A	P24928	1970 aa	Known RBP	11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	EGFR	P00533	1210 aa		11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	TTLL12	Q14166	644 aa	Predicted RBP	11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	GPR153	Q6NV75	609 aa		11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	CLEC4G	Q6UXB4	293 aa		11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	HTATIP2	Q9BUP3	242 aa		11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	LGR6	Q9HBX8	967 aa		11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	POLK	Q9UBT6	870 aa		11.16	□□□□□ -0.62
PUM1-213	ENST00000524516	WTIP	A6NIX2	430 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-213	ENST00000524516	UBE2Q2L	H0YL09	131 aa		11.15	□□□□□ -0.62
PUM1-213	ENST00000524516	CRY2	Q49AN0	593 aa		11.15	□□□□□ -0.62
PUM1-213	ENST00000524516	MOB2	Q70IA6	237 aa		11.15	□□□□□ -0.62
PUM1-213	ENST00000524516	AEBP1	Q8IUX7	1158 aa		11.15	□□□□□ -0.62
PUM1-213	ENST00000524516	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.15	□□□□□ -0.62
PUM1-213	ENST00000524516	MTMR10	Q9NXD2	777 aa		11.15	□□□□□ -0.62
PUM1-213	ENST00000524516	RNMT	O43148	476 aa	Known RBP	11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	A1BG	P04217	495 aa		11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	TCIRG1	Q13488	830 aa		11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	KIF4B	Q2VIQ3	1234 aa		11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	DPF2	Q92785	391 aa		11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	RBM17	Q96I25	401 aa	Known RBP	11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	ABCC12	Q96J65	1359 aa		11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	HEG1	Q9ULI3	1381 aa		11.14	□□□□□ -0.63
PUM1-213	ENST00000524516	HOXD11	P31277	338 aa	Predicted RBP	11.13	□□□□□ -0.63
PUM1-213	ENST00000524516	KIAA2012	Q0VF49	1180 aa		11.13	□□□□□ -0.63
PUM1-213	ENST00000524516	KIF7	Q2M1P5	1343 aa		11.12	□□□□□ -0.63
PUM1-213	ENST00000524516	RIC1	Q4ADV7	1423 aa		11.12	□□□□□ -0.63
PUM1-213	ENST00000524516	LAMA3	Q16787	3333 aa		11.12	□□□□□ -0.63
PUM1-213	ENST00000524516	ZBTB7B	O15156	539 aa	Predicted RBP	11.12	□□□□□ -0.63
PUM1-213	ENST00000524516	DPP8	Q6V1X1	898 aa	Predicted RBP	11.12	□□□□□ -0.63
PUM1-213	ENST00000524516	NUTM1	Q86Y26	1132 aa		11.12	□□□□□ -0.63
PUM1-213	ENST00000524516	ZNF496	Q96IT1	587 aa	Predicted RBP	11.12	□□□□□ -0.63
PUM1-213	ENST00000524516	VCAN	P13611	3396 aa		11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	ASTN2	O75129	1339 aa	Predicted RBP	11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	YDJC	A8MPS7	323 aa		11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	PSMD14	O00487	310 aa		11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	HOXA10	P31260	410 aa	Predicted RBP	11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	PIP4K2A	P48426	406 aa	Predicted RBP	11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	ANGEL2	Q5VTE6	544 aa	Known RBP	11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	CRAMP1	Q96RY5	1269 aa		11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	NYX	Q9GZU5	481 aa		11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	STAP2	Q9UGK3	403 aa		11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	PTCH2	Q9Y6C5	1203 aa		11.11	□□□□□ -0.63
PUM1-213	ENST00000524516	RPTOR	Q8N122	1335 aa		11.1	□□□□□ -0.63
PUM1-213	ENST00000524516	TMEM265	A0A087WTH1	108 aa		11.1	□□□□□ -0.63
PUM1-213	ENST00000524516	SLC24A1	O60721	1099 aa		11.1	□□□□□ -0.63
PUM1-213	ENST00000524516	RPS12	P25398	132 aa	Known RBP	11.1	□□□□□ -0.63
PUM1-213	ENST00000524516	SULT6B1	Q6IMI4	303 aa		11.1	□□□□□ -0.63
PUM1-213	ENST00000524516	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.1	□□□□□ -0.63
PUM1-213	ENST00000524516	ATP6V0A2	Q9Y487	856 aa		11.1	□□□□□ -0.63
PUM1-213	ENST00000524516	SP3	Q02447	781 aa		11.09	□□□□□ -0.63
PUM1-213	ENST00000524516	ARHGEF6	Q15052	776 aa		11.09	□□□□□ -0.63
PUM1-213	ENST00000524516	IFNL1	Q8IU54	200 aa		11.09	□□□□□ -0.63
PUM1-213	ENST00000524516	SYMPK	Q92797	1274 aa	Known RBP	11.09	□□□□□ -0.63
PUM1-213	ENST00000524516	TESK2	Q96S53	571 aa		11.09	□□□□□ -0.63
PUM1-213	ENST00000524516	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.09	□□□□□ -0.63
PUM1-213	ENST00000524516	KDM3B	Q7LBC6	1761 aa		11.08	□□□□□ -0.64
PUM1-213	ENST00000524516	MANSC4	A6NHS7	340 aa	Predicted RBP	11.08	□□□□□ -0.64
PUM1-213	ENST00000524516	EVI5	O60447	810 aa		11.08	□□□□□ -0.64
PUM1-213	ENST00000524516	NF2	P35240	595 aa		11.08	□□□□□ -0.64
PUM1-213	ENST00000524516	SH3TC2	Q8TF17	1288 aa		11.08	□□□□□ -0.64
PUM1-213	ENST00000524516	SHISA4	Q96DD7	197 aa		11.08	□□□□□ -0.64
PUM1-213	ENST00000524516	INHBE	P58166	350 aa		11.07	□□□□□ -0.64
PUM1-213	ENST00000524516	CRHR2	Q13324	411 aa		11.07	□□□□□ -0.64
PUM1-213	ENST00000524516	ZNF790	Q6PG37	636 aa		11.07	□□□□□ -0.64
PUM1-213	ENST00000524516	FMNL2	Q96PY5	1086 aa		11.07	□□□□□ -0.64
PUM1-213	ENST00000524516	NEUROD1	Q13562	356 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	SCARF1	Q14162	830 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	PRAMEF18	Q5VWM3	479 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	SPRYD7	Q5W111	196 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	NKX2-3	Q8TAU0	364 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	SNX27	Q96L92	541 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	CARD14	Q9BXL6	1004 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	DBNDD1	Q9H9R9	158 aa		11.06	□□□□□ -0.64
PUM1-213	ENST00000524516	BCAM	P50895	628 aa		11.05	□□□□□ -0.64
PUM1-213	ENST00000524516	PTPN12	Q05209	780 aa	Known RBP	11.05	□□□□□ -0.64
PUM1-213	ENST00000524516	OTUD7B	Q6GQQ9	843 aa		11.05	□□□□□ -0.64
PUM1-213	ENST00000524516	ARMC9	Q7Z3E5	817 aa		11.05	□□□□□ -0.64
PUM1-213	ENST00000524516	SCAF8	Q9UPN6	1271 aa	Known RBP	11.05	□□□□□ -0.64
PUM1-213	ENST00000524516	IRS2	Q9Y4H2	1338 aa		11.05	□□□□□ -0.64
PUM1-213	ENST00000524516	TNFRSF10A	O00220	468 aa		11.04	□□□□□ -0.64
PUM1-213	ENST00000524516	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
PUM1-213	ENST00000524516	RGL2	O15211	777 aa		11.04	□□□□□ -0.64
PUM1-213	ENST00000524516	CAP1	Q01518	475 aa		11.04	□□□□□ -0.64
PUM1-213	ENST00000524516	TEF	Q10587	303 aa		11.04	□□□□□ -0.64

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