RNA–Protein interactions for RNA: ENST00000524460.1

SNX19-203, Transcript of sorting nexin 19, humanhuman

TSL 5

Gene SNX19, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-203ENST00000524460 MSL1Q68DK7 614 aa11.95□□□□□ -0.5
SNX19-203ENST00000524460 NBPF5PQ86XG9 351 aaPredicted RBP11.95□□□□□ -0.5
SNX19-203ENST00000524460 KAZALD1Q96I82 304 aa11.95□□□□□ -0.5
SNX19-203ENST00000524460 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
SNX19-203ENST00000524460 LAMB2P55268 1798 aa11.95□□□□□ -0.5
SNX19-203ENST00000524460 CARMIL3Q8ND23 1372 aa11.94□□□□□ -0.5
SNX19-203ENST00000524460 CDHR2Q9BYE9 1310 aa11.94□□□□□ -0.5
SNX19-203ENST00000524460 HCLS1P14317 486 aaPredicted RBP11.94□□□□□ -0.5
SNX19-203ENST00000524460 NFIXQ14938 502 aa11.94□□□□□ -0.5
SNX19-203ENST00000524460 ERFEQ4G0M1 354 aa11.93□□□□□ -0.5
SNX19-203ENST00000524460 LMBR1LQ6UX01 489 aa11.93□□□□□ -0.5
SNX19-203ENST00000524460 CCDC24Q8N4L8 307 aa11.93□□□□□ -0.5
SNX19-203ENST00000524460 NYXQ9GZU5 481 aa11.93□□□□□ -0.5
SNX19-203ENST00000524460 DDX60Q8IY21 1712 aaKnown RBP11.93□□□□□ -0.5
SNX19-203ENST00000524460 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
SNX19-203ENST00000524460 FOXO4P98177 505 aa11.92□□□□□ -0.5
SNX19-203ENST00000524460 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
SNX19-203ENST00000524460 ILDR2Q71H61 639 aa11.92□□□□□ -0.5
SNX19-203ENST00000524460 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
SNX19-203ENST00000524460 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
SNX19-203ENST00000524460 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
SNX19-203ENST00000524460 PDE8AO60658 829 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
SNX19-203ENST00000524460 CTSWP56202 376 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 DDR1Q08345 913 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 MTX1Q13505 466 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 RABL6Q3YEC7 729 aaPredicted RBP11.91□□□□□ -0.5
SNX19-203ENST00000524460 POTEHQ6S545 545 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 TPTE2Q6XPS3 522 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 SKAP1Q86WV1 359 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 CNBD1Q8NA66 436 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 SSH3Q8TE77 659 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 GCC1Q96CN9 775 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 SIL1Q9H173 461 aa11.91□□□□□ -0.5
SNX19-203ENST00000524460 PA2G4Q9UQ80 394 aaKnown RBP11.91□□□□□ -0.5
SNX19-203ENST00000524460 SERPINB2P05120 415 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 PRKAR2AP13861 404 aaKnown RBP11.9□□□□□ -0.5
SNX19-203ENST00000524460 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
SNX19-203ENST00000524460 TAF7LQ5H9L4 462 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 ANKRD45Q5TZF3 282 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 SMC5Q8IY18 1101 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 NLGN1Q8N2Q7 840 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 KLHDC4Q8TBB5 520 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 DCTPP1Q9H773 170 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
SNX19-203ENST00000524460 TNRC6CQ9HCJ0 1690 aaKnown RBP11.9□□□□□ -0.5
SNX19-203ENST00000524460 SPEF2Q9C093 1822 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
SNX19-203ENST00000524460 MMP10P09238 476 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 RGS3P49796 1198 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 ST5P78524 1137 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 CCDC57Q2TAC2 916 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 LNPKQ9C0E8 428 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 PDGFDQ9GZP0 370 aaPredicted RBP11.89□□□□□ -0.51
SNX19-203ENST00000524460 GREM2Q9H772 168 aa11.89□□□□□ -0.51
SNX19-203ENST00000524460 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
SNX19-203ENST00000524460 TM4SF1P30408 202 aa11.88□□□□□ -0.51
SNX19-203ENST00000524460 G3BP1Q13283 466 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNX19-203ENST00000524460 R3HDM1Q15032 1099 aaKnown RBP11.88□□□□□ -0.51
SNX19-203ENST00000524460 CCDC152Q4G0S7 254 aa11.88□□□□□ -0.51
SNX19-203ENST00000524460 C3orf67Q6ZVT6 689 aa11.88□□□□□ -0.51
SNX19-203ENST00000524460 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
SNX19-203ENST00000524460 ZNF594Q96JF6 807 aaPredicted RBP11.88□□□□□ -0.51
SNX19-203ENST00000524460 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
SNX19-203ENST00000524460 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
SNX19-203ENST00000524460 PSDA5PKW4 1024 aaPredicted RBP11.87□□□□□ -0.51
SNX19-203ENST00000524460 ITGA6P23229 1130 aa11.87□□□□□ -0.51
SNX19-203ENST00000524460 RFX5P48382 616 aaPredicted RBP11.87□□□□□ -0.51
SNX19-203ENST00000524460 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
SNX19-203ENST00000524460 CSF1RP07333 972 aa11.86□□□□□ -0.51
SNX19-203ENST00000524460 PTPN12Q05209 780 aaKnown RBP11.86□□□□□ -0.51
SNX19-203ENST00000524460 HSP90AB4PQ58FF6 505 aa11.86□□□□□ -0.51
SNX19-203ENST00000524460 CHD1LQ86WJ1 897 aa11.86□□□□□ -0.51
SNX19-203ENST00000524460 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
SNX19-203ENST00000524460 LRRCC1Q9C099 1032 aa11.86□□□□□ -0.51
SNX19-203ENST00000524460 IL1RAPL2Q9NP60 686 aa11.86□□□□□ -0.51
SNX19-203ENST00000524460 TAF1P21675 1872 aa11.86□□□□□ -0.51
SNX19-203ENST00000524460 RAB11FIP3O75154 756 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 NUCB1Q02818 461 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 SLC10A5Q5PT55 438 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 ERC1Q8IUD2 1116 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 COPRSQ9NQ92 184 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 SEC31BQ9NQW1 1179 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 NOP58Q9Y2X3 529 aaKnown RBP11.85□□□□□ -0.51
SNX19-203ENST00000524460 NRXN2Q9P2S2 1712 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
SNX19-203ENST00000524460 EYA2O00167 538 aa11.84□□□□□ -0.51
SNX19-203ENST00000524460 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
SNX19-203ENST00000524460 KIF1BPQ96EK5 621 aa11.84□□□□□ -0.51
SNX19-203ENST00000524460 PUS3Q9BZE2 481 aaKnown RBP11.84□□□□□ -0.51
SNX19-203ENST00000524460 CNNM1Q9NRU3 951 aa11.84□□□□□ -0.51
SNX19-203ENST00000524460 LRP5O75197 1615 aa11.83□□□□□ -0.52
SNX19-203ENST00000524460 PDE4AP27815 886 aa11.83□□□□□ -0.52
SNX19-203ENST00000524460 IGHMBP2P38935 993 aaKnown RBP11.83□□□□□ -0.52
SNX19-203ENST00000524460 SF3B3Q15393 1217 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms