RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 FRAT1Q92837 279 aaPredicted RBP8.93□□□□□ -0.98
VPS11-201ENST00000524454 ARFGEF1Q9Y6D6 1849 aa8.92□□□□□ -0.98
VPS11-201ENST00000524454 HDAC1Q13547 482 aaPredicted RBP8.92□□□□□ -0.98
VPS11-201ENST00000524454 HLFQ16534 295 aa8.92□□□□□ -0.98
VPS11-201ENST00000524454 PROSER3Q2NL68 480 aa8.92□□□□□ -0.98
VPS11-201ENST00000524454 TMEM121BQ9BXQ6 578 aaPredicted RBP8.92□□□□□ -0.98
VPS11-201ENST00000524454 BCS1LQ9Y276 419 aa8.92□□□□□ -0.98
VPS11-201ENST00000524454 ANKRD36CQ5JPF3 1778 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 TNRC6CQ9HCJ0 1690 aaKnown RBP8.91□□□□□ -0.98
VPS11-201ENST00000524454 UTRNP46939 3433 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 IBTKQ9P2D0 1353 aaPredicted RBP8.91□□□□□ -0.98
VPS11-201ENST00000524454 KCNA3P22001 575 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 PANK1Q8TE04 598 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
VPS11-201ENST00000524454 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.91□□□□□ -0.98
VPS11-201ENST00000524454 NOB1Q9ULX3 412 aaKnown RBP8.91□□□□□ -0.98
VPS11-201ENST00000524454 COG6Q9Y2V7 657 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
VPS11-201ENST00000524454 GOLGB1Q14789 3259 aaKnown RBP8.9□□□□□ -0.98
VPS11-201ENST00000524454 ELL2O00472 640 aaPredicted RBP8.9□□□□□ -0.98
VPS11-201ENST00000524454 RLBP1P12271 317 aa8.9□□□□□ -0.98
VPS11-201ENST00000524454 TGFB2P61812 414 aa8.9□□□□□ -0.98
VPS11-201ENST00000524454 PDIA6Q15084 440 aa8.9□□□□□ -0.98
VPS11-201ENST00000524454 PRR5LQ6MZQ0 368 aa8.9□□□□□ -0.98
VPS11-201ENST00000524454 SETDB2Q96T68 719 aa8.9□□□□□ -0.98
VPS11-201ENST00000524454 ZBTB40Q9NUA8 1239 aa8.9□□□□□ -0.98
VPS11-201ENST00000524454 NPHP1O15259 732 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 GPTP24298 496 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 AIMP1Q12904 312 aaKnown RBP8.89□□□□□ -0.99
VPS11-201ENST00000524454 INTS3Q68E01 1043 aaKnown RBP8.89□□□□□ -0.99
VPS11-201ENST00000524454 KIF6Q6ZMV9 814 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 PAXIP1Q6ZW49 1069 aaPredicted RBP8.89□□□□□ -0.99
VPS11-201ENST00000524454 C2CD5Q86YS7 1000 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 C8orf58Q8NAV2 365 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 OTUD5Q96G74 571 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 BCL2L13Q9BXK5 485 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 RYDENQ9NUL5 291 aaKnown RBP8.89□□□□□ -0.99
VPS11-201ENST00000524454 CHPF2Q9P2E5 772 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 NIP7Q9Y221 180 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS11-201ENST00000524454 ARFGEF2Q9Y6D5 1785 aa8.89□□□□□ -0.99
VPS11-201ENST00000524454 MAP3K15Q6ZN16 1313 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 CCDC88AQ3V6T2 1871 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 GRIN3BO60391 1043 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 HDGFL1Q5TGJ6 251 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 CCDC30Q5VVM6 783 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 ARHGAP27Q6ZUM4 889 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 LRP10Q7Z4F1 713 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 NBPF5PQ86XG9 351 aaPredicted RBP8.88□□□□□ -0.99
VPS11-201ENST00000524454 TSPYL6Q8N831 410 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 CNBD1Q8NA66 436 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 XAGE3Q8WTP9 111 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
VPS11-201ENST00000524454 PIM2Q9P1W9 311 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 ZNF652Q9Y2D9 606 aa8.88□□□□□ -0.99
VPS11-201ENST00000524454 RBM19Q9Y4C8 960 aaKnown RBP8.88□□□□□ -0.99
VPS11-201ENST00000524454 SLX4Q8IY92 1834 aa8.87□□□□□ -0.99
VPS11-201ENST00000524454 UBN2Q6ZU65 1347 aa8.87□□□□□ -0.99
VPS11-201ENST00000524454 LAMB2P55268 1798 aa8.87□□□□□ -0.99
VPS11-201ENST00000524454 DALRD3Q5D0E6 543 aaKnown RBP8.87□□□□□ -0.99
VPS11-201ENST00000524454 NUTM1Q86Y26 1132 aa8.87□□□□□ -0.99
VPS11-201ENST00000524454 ITPRIPQ8IWB1 547 aa8.87□□□□□ -0.99
VPS11-201ENST00000524454 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
VPS11-201ENST00000524454 ZNF622Q969S3 477 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS11-201ENST00000524454 STK31Q9BXU1 1019 aa8.87□□□□□ -0.99
VPS11-201ENST00000524454 SBF1O95248 1867 aa8.87□□□□□ -0.99
VPS11-201ENST00000524454 ABCC12Q96J65 1359 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 ERBB4Q15303 1308 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 CCT4P50991 539 aaKnown RBP8.86□□□□□ -0.99
VPS11-201ENST00000524454 ST5P78524 1137 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 RASSF7Q02833 373 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 CLEC4GQ6UXB4 293 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 COPS6Q7L5N1 327 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 SMC5Q8IY18 1101 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
VPS11-201ENST00000524454 ZNF526Q8TF50 670 aaPredicted RBP8.86□□□□□ -0.99
VPS11-201ENST00000524454 TIAM2Q8IVF5 1701 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 ERVV-1B6SEH8 477 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 H0YIN7 160 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 ZBTB7BO15156 539 aaPredicted RBP8.85□□□□□ -0.99
VPS11-201ENST00000524454 ERFEQ4G0M1 354 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 SUSD4Q5VX71 490 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 SLC51AQ86UW1 340 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 GCC1Q96CN9 775 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 BRIP1Q9BX63 1249 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 PHAXQ9H814 394 aaKnown RBP8.85□□□□□ -0.99
VPS11-201ENST00000524454 DDX21Q9NR30 783 aaKnown RBP eCLIP8.85□□□□□ -0.99
VPS11-201ENST00000524454 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 ATP10DQ9P241 1426 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 TAF1P21675 1872 aa8.85□□□□□ -0.99
VPS11-201ENST00000524454 GTF2E1P29083 439 aaPredicted RBP8.84□□□□□ -0.99
VPS11-201ENST00000524454 PDE6BP35913 854 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 FER1L6Q2WGJ9 1857 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 TMEM92Q6UXU6 159 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 GIGYF2Q6Y7W6 1299 aaKnown RBP8.84□□□□□ -0.99
VPS11-201ENST00000524454 C3orf67Q6ZVT6 689 aa8.84□□□□□ -0.99
VPS11-201ENST00000524454 DDX60Q8IY21 1712 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms